prot_H-akashiwo_Contig1136.13.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1136.13.1
Unique Nameprot_H-akashiwo_Contig1136.13.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length277
Homology
BLAST of mRNA_H-akashiwo_Contig1136.13.1 vs. uniprot
Match: W7UBI9_9STRA (Small-conductance mechanosensitive channel n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UBI9_9STRA)

HSP 1 Score: 130 bits (326), Expect = 2.060e-30
Identity = 81/200 (40.50%), Postives = 116/200 (58.00%), Query Frame = 0
Query:   63 WGSLPAVIRQIINPRDLAVWACFQLVYQRS--ALAALGPGPPARAPPRPRGQQGLRGLRWADTWPVLGFLEPKLGYLARLLGGAYLSNGVLGLLADQRSFPVYKKVHSLVTNVIYIIYTAYLLNELKTYFLPVLLPQLTQDSRRNYILQKSSSFLMWAFAVIAVIDRISTFLGRPFSSTLAFGGISGIAFGLGSRDIVRS 260
            W  LP  +R +INP DL ++   +L+Y+++  AL A       RA        G+          VLGF+EPKLG L   +G  Y+ N VL LL D   + V      L+ +++YI Y AY +NE+K  +L   +P L +D RR+YI+ +SSS ++W  A+ + I+ IS FL  P SSTLAFGGI G+AFGL S+D+V +
Sbjct:  189 WTMLPLALRALINPSDLLLFVTTRLLYRKACRALHAFHHFLWKRA--------GIMDEPRVYEDSVLGFMEPKLGTLTSFIGVTYVINVVLSLLIDI-GWRVRADSARLMASLLYIAYGAYFVNEVKKEYLTTWVPSLQEDRRRSYIIDRSSSVVLWILAIFSCIECISAFLKIPLSSTLAFGGIGGLAFGLASKDVVSN 379          
BLAST of mRNA_H-akashiwo_Contig1136.13.1 vs. uniprot
Match: A0A4D9D8J2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8J2_9STRA)

HSP 1 Score: 126 bits (317), Expect = 1.370e-29
Identity = 80/197 (40.61%), Postives = 115/197 (58.38%), Query Frame = 0
Query:   66 LPAVIRQIINPRDLAVWACFQLVYQRS--ALAALGPGPPARAPPRPRGQQGLRGLRWADTWPVLGFLEPKLGYLARLLGGAYLSNGVLGLLADQRSFPVYKKVHSLVTNVIYIIYTAYLLNELKTYFLPVLLPQLTQDSRRNYILQKSSSFLMWAFAVIAVIDRISTFLGRPFSSTLAFGGISGIAFGLGSRDIVRS 260
            LP  +R +INP DL ++   +L+Y+++  AL A       RA        G+          VLGF+EPKLG L   +G  Y+ N VL LL D   + V      L+ +++YI Y AY +NE+K  +L   +P L +D RR+YI+ +SSS ++W  A+ + I+ IS FL  P SSTLAFGGI G+AFGL S+D+V +
Sbjct:    2 LPLALRALINPSDLLLFVTTRLLYRKACRALHAFHHFLWKRA--------GILDEPRVYEDSVLGFMEPKLGTLTSFIGVTYVINVVLSLLIDI-GWRVRADSARLMASLLYIAYGAYFVNEVKKEYLTTWVPSLQEDRRRSYIIDRSSSVVLWILAIFSCIECISAFLKIPLSSTLAFGGIGGLAFGLASKDVVSN 189          
BLAST of mRNA_H-akashiwo_Contig1136.13.1 vs. uniprot
Match: A0A6U0TNP3_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0TNP3_9STRA)

HSP 1 Score: 112 bits (280), Expect = 2.150e-24
Identity = 73/211 (34.60%), Postives = 107/211 (50.71%), Query Frame = 0
Query:   60 VGLWGSLPAVIRQIINPRDLAVWACFQLVYQRSA-LAALGPGPPARAPPRPRGQQGLRGLRWADTWP------VLGFLEPKLGYLARLLGGAYLSN---GVLGLLADQRSFPVYKKVHSLVTNVIYIIYTAYLLNELKTYFLPVLLPQLTQDSRRNYILQKSSSFLMWAFAVIAVIDRISTFLGRPFSSTLAFGGISGIAFGLGSRDIVRS 260
            + +W  +P  +R ++ PRDL  +  F+  Y R+  L  L              Q  L  L   D  P      VLGFLEP+   L+RL G  YL N     +GL+ D    P    +  L T + Y  Y  Y LNE++ +  P   P+L +D RR YI+ +S+S   W   ++ ++D+ISTF   P SS+LA GG+ G+A GL S+D+V +
Sbjct:   68 LNVWAEVPTPLRVLMRPRDLLAYLIFRTCYSRALRLGYLL-------------QTLLSRLLKKDIPPPAYLQTVLGFLEPRFAQLSRLTGLIYLVNVSISAIGLI-DLNIRP---GLDRLFTKLAYTAYAGYFLNEVRRFVTPRWFPKLAEDKRRAYIVDRSASVFFWTITIVLLLDQISTFFNVPLSSSLALGGVGGVAIGLASKDVVSN 261          
BLAST of mRNA_H-akashiwo_Contig1136.13.1 vs. uniprot
Match: A0A835ZID6_9STRA (Mechanosensitive ion channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZID6_9STRA)

HSP 1 Score: 111 bits (277), Expect = 7.390e-24
Identity = 69/209 (33.01%), Postives = 108/209 (51.67%), Query Frame = 0
Query:   70 IRQIINPRDLAVWACFQLVYQRSALAALGPGPPARAPPRPRGQQGLRGL--RWADTWPVLGFLEPKLGYLARLLGGAYLSNGVLGLLADQRSFPVYKKVHSLVTNVIYIIYTAYLLNELKT----------------YFLPVLLPQLTQDSRRNYILQKSSSFLMWAFAVIAVIDRISTFLGRPFSSTLAFGGISGIAFGLGSRDIVRS 260
            +R +INPRDLA++  F LVY+++     G    A      R   G       +  +W  LGFLEP+L  L R++ G Y++NG LG LA+   + +       V+ V+  +Y  Y ++ELK                 ++LPV+ P+L  D R+ +I  +++S L W    + ++  IS FL  P +ST+AFGG  GIAFG  ++ I  +
Sbjct:  205 VRALINPRDLALFVGFYLVYKKALRVIYGLQAKAMRAMASRSGSGAPAAVKPFEQSW--LGFLEPRLRSLTRVMAGLYVANGALGGLANL-GYRLRPGTQDFVSTVVATLYAGYFIDELKRQQRSRDAFCCLSCAPQFYLPVIWPELQNDMRKAFIYNRTTSVLTWTLVALGLLQVISAFLHIPLASTMAFGGAGGIAFGFAAKGIFEN 410          
BLAST of mRNA_H-akashiwo_Contig1136.13.1 vs. uniprot
Match: D7G8R0_ECTSI (Small Conductance Mechanosensitive Ion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8R0_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 3.990e-21
Identity = 75/205 (36.59%), Postives = 109/205 (53.17%), Query Frame = 0
Query:   63 WGSLPAVIRQIINPRDLAVWACFQLVYQRSALAALGPGPPARAPPRPRGQ-QGLRGLRWADTWP----VLGFLEPKLGYLARLLGGAY-LSNGVLGLLADQ-RSFPVYKKVHSLVTNVIYIIYTAYLLNELKTYFLPVLLPQLTQDSRRNYILQKSSSFLMWAFAVIAVIDRISTFLGRPFSSTLAFGGISGIAFGLGSRDIVRS 260
            WG L      ++ P+ L ++  FQ+VY+R                  R Q Q  R +R  D  P    VLGF+EP+L  L+R L  AY L +GV  L+A    + P   KV S   +V+Y  Y  Y ++E K +FLPV +P L  D R+ +I  +S S L W+  ++ V + IS +L  P +STLAFGGI G+A GL  +D++ +
Sbjct:   25 WGPLT----NVVTPQKLFLFLLFQIVYRRLLRLLY------------RLQVQVWRLVRKHDPQPYEQSVLGFVEPRLRTLSRTLVVAYALKSGVRVLIASGWNANPQLAKVLS---DVVYCWYAGYFVDEAKRFFLPVWIPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSN 210          
BLAST of mRNA_H-akashiwo_Contig1136.13.1 vs. uniprot
Match: A0A7S0SR49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SR49_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 2.100e-13
Identity = 42/111 (37.84%), Postives = 63/111 (56.76%), Query Frame = 0
Query:  150 VLGLLADQRSFPVYKKVHSLVTNVIYIIYTAYLLNELKTYFLPVLLPQLTQDSRRNYILQKSSSFLMWAFAVIAVIDRISTFLGRPFSSTLAFGGISGIAFGLGSRDIVRS 260
            +L LL    +  V    H +V  V Y IY     +  K  FL + LP L  + R++Y++Q+SSS ++W   V+   + +ST+L  P SSTLAFGG  G+A GL +RD+  +
Sbjct:    9 LLNLLFILMNLSVKPDFHIIVARVSYAIYLTNFFDMFKLKFLNLFLPNLNANRRQSYVVQRSSSVILWVVGVLIACEMVSTYLKVPLSSTLAFGGFGGLALGLSARDVAAN 119          
BLAST of mRNA_H-akashiwo_Contig1136.13.1 vs. uniprot
Match: A0A6H5L1M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1M0_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 8.450e-7
Identity = 26/62 (41.94%), Postives = 39/62 (62.90%), Query Frame = 0
Query:  195 LPQLTQDSRRNYILQKSSSFLMWAFAVIAVIDRISTFLGRPFSSTLAFGGISGIAFGLGSRD 256
            +P L  D R+ +I  +S S L W+  ++ V + IS +L  P +STLAFGGI G+A GL  ++
Sbjct:    3 IPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKE 64          
BLAST of mRNA_H-akashiwo_Contig1136.13.1 vs. uniprot
Match: A0A482SKJ6_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SKJ6_9ARCH)

HSP 1 Score: 56.2 bits (134), Expect = 3.120e-6
Identity = 30/96 (31.25%), Postives = 54/96 (56.25%), Query Frame = 0
Query:  126 VLGFLEPKLGYLARLLGGAYLSNGVLGLLADQRSFPVYKKVHSLVTNVIYIIYTAYLLNELKTYFLPVLLPQLTQDSRRNYILQKSSSFLMWAFAV 221
            ++GF+E + G L +L+   Y+   V   L  Q  F +   +  L++++ Y +Y A  ++  KT F+   +PQ+ +  R+ Y+L KSSS ++W  AV
Sbjct:   57 IIGFIEDRAGLLVKLMTCNYIVKLVCSFLI-QLGFKIPPDLPILLSSITYSLYAAQFVDLFKTQFMKTFVPQVAESRRQTYVLDKSSSVVIWVIAV 151          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1136.13.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
W7UBI9_9STRA2.060e-3040.50Small-conductance mechanosensitive channel n=1 Tax... [more]
A0A4D9D8J2_9STRA1.370e-2940.61Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A6U0TNP3_9STRA2.150e-2434.60Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A835ZID6_9STRA7.390e-2433.01Mechanosensitive ion channel-domain-containing pro... [more]
D7G8R0_ECTSI3.990e-2136.59Small Conductance Mechanosensitive Ion channel n=1... [more]
A0A7S0SR49_9STRA2.100e-1337.84Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A6H5L1M0_9PHAE8.450e-741.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A482SKJ6_9ARCH3.120e-631.25Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.287.1260coord: 160..262
e-value: 5.5E-7
score: 31.8
IPR011014Mechanosensitive ion channel MscS, transmembrane-2SUPERFAMILY82861Mechanosensitive channel protein MscS (YggB), transmembrane regioncoord: 170..254

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1136contigH-akashiwo_Contig1136:322256..358985 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1136.13.1mRNA_H-akashiwo_Contig1136.13.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1136 321710..359332 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1136.13.1 ID=prot_H-akashiwo_Contig1136.13.1|Name=mRNA_H-akashiwo_Contig1136.13.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=277bp
MGVKSRAPPLQQATNSLPLGGLNVDTAVDVPKSIPQNMQSLFTLGVLFKR
TISQISLIFVGLWGSLPAVIRQIINPRDLAVWACFQLVYQRSALAALGPG
PPARAPPRPRGQQGLRGLRWADTWPVLGFLEPKLGYLARLLGGAYLSNGV
LGLLADQRSFPVYKKVHSLVTNVIYIIYTAYLLNELKTYFLPVLLPQLTQ
DSRRNYILQKSSSFLMWAFAVIAVIDRISTFLGRPFSSTLAFGGISGIAF
GLGSRDIVRSSSLPLAVLAAAISWAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011014MscS_channel_TM-2