prot_H-akashiwo_Contig1126.7.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1126.7.1
Unique Nameprot_H-akashiwo_Contig1126.7.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length74
Homology
BLAST of mRNA_H-akashiwo_Contig1126.7.1 vs. uniprot
Match: A0A7S3V009_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3V009_HETAK)

HSP 1 Score: 136 bits (342), Expect = 4.810e-39
Identity = 66/75 (88.00%), Postives = 68/75 (90.67%), Query Frame = 0
Query:    1 MYTACTRSVSAVPPAFYAHLMAFRGAFYIHDMEN--TETTSTSNGSSGGDERHEVNWSAHFNAPHPNVTQRMYFV 73
            MYTACTRSVSAVPPAFYAHLMAFRGAFYIHD E   TETTSTSNGSSGGDE+ EVNW  HFNAPHPNVT+RMYFV
Sbjct:  115 MYTACTRSVSAVPPAFYAHLMAFRGAFYIHDTEGSITETTSTSNGSSGGDEQQEVNWGQHFNAPHPNVTKRMYFV 189          
BLAST of mRNA_H-akashiwo_Contig1126.7.1 vs. uniprot
Match: A0A7S3UXA3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXA3_HETAK)

HSP 1 Score: 136 bits (342), Expect = 1.360e-35
Identity = 66/75 (88.00%), Postives = 68/75 (90.67%), Query Frame = 0
Query:    1 MYTACTRSVSAVPPAFYAHLMAFRGAFYIHDMEN--TETTSTSNGSSGGDERHEVNWSAHFNAPHPNVTQRMYFV 73
            MYTACTRSVSAVPPAFYAHLMAFRGAFYIHD E   TETTSTSNGSSGGDE+ EVNW  HFNAPHPNVT+RMYFV
Sbjct:  799 MYTACTRSVSAVPPAFYAHLMAFRGAFYIHDTEGSITETTSTSNGSSGGDEQQEVNWGQHFNAPHPNVTKRMYFV 873          
BLAST of mRNA_H-akashiwo_Contig1126.7.1 vs. uniprot
Match: C0PNQ0_MAIZE (Piwi domain-containing protein n=1 Tax=Zea mays TaxID=4577 RepID=C0PNQ0_MAIZE)

HSP 1 Score: 58.9 bits (141), Expect = 1.760e-8
Identity = 27/47 (57.45%), Postives = 35/47 (74.47%), Query Frame = 0
Query:    2 YTACTRSVSAVPPAFYAHLMAFRGAFYIH-DMENTETTSTSNGSSGG 47
            Y  CTRSVS VPPA+YAHL AFR  FY+  +M   +T+ +SNG++GG
Sbjct:  239 YARCTRSVSVVPPAYYAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 285          
BLAST of mRNA_H-akashiwo_Contig1126.7.1 vs. uniprot
Match: A0A1D6P2M1_MAIZE (Argonaute101 n=10 Tax=PACMAD clade TaxID=147370 RepID=A0A1D6P2M1_MAIZE)

HSP 1 Score: 58.9 bits (141), Expect = 2.120e-8
Identity = 27/47 (57.45%), Postives = 35/47 (74.47%), Query Frame = 0
Query:    2 YTACTRSVSAVPPAFYAHLMAFRGAFYIH-DMENTETTSTSNGSSGG 47
            Y  CTRSVS VPPA+YAHL AFR  FY+  +M   +T+ +SNG++GG
Sbjct:  940 YARCTRSVSVVPPAYYAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 986          
BLAST of mRNA_H-akashiwo_Contig1126.7.1 vs. uniprot
Match: A0A1D6LSF6_MAIZE (Argonaute10b n=3 Tax=Zea mays TaxID=4577 RepID=A0A1D6LSF6_MAIZE)

HSP 1 Score: 58.5 bits (140), Expect = 2.890e-8
Identity = 28/46 (60.87%), Postives = 35/46 (76.09%), Query Frame = 0
Query:    2 YTACTRSVSAVPPAFYAHLMAFRGAFYIH-DMENTETTSTSNGSSG 46
            Y  CTRSVS VPPA+YAHL AFR  FY+  +M + +T+ TSNG+SG
Sbjct:  876 YARCTRSVSVVPPAYYAHLAAFRARFYMEPEMLDNQTSKTSNGTSG 921          
BLAST of mRNA_H-akashiwo_Contig1126.7.1 vs. uniprot
Match: F0W310_9STRA (Argonaute4 (AGO4) putative n=2 Tax=Albugo TaxID=65356 RepID=F0W310_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 2.910e-8
Identity = 30/73 (41.10%), Postives = 42/73 (57.53%), Query Frame = 0
Query:    1 MYTACTRSVSAVPPAFYAHLMAFRGAFYIHDMENTETTSTSNGSSGGDERHEVNWSAHFNAPHPNVTQRMYFV 73
            M+  CTRSVS VPP +YAHL AFR  F++++M +  +T       G D     N+   F+  H  V+ RMYF+
Sbjct: 1156 MFARCTRSVSVVPPVYYAHLAAFRARFFLNEMSDGASTI------GSDNSKASNYD--FSHVHEQVSNRMYFI 1220          
BLAST of mRNA_H-akashiwo_Contig1126.7.1 vs. uniprot
Match: A0A830C5V8_9LAMI (Protein argonaute mel1 n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830C5V8_9LAMI)

HSP 1 Score: 58.2 bits (139), Expect = 3.960e-8
Identity = 26/46 (56.52%), Postives = 35/46 (76.09%), Query Frame = 0
Query:    2 YTACTRSVSAVPPAFYAHLMAFRGAFYIHDMENTETTSTSNGSSGG 47
            Y  CTRSVS VPPA+YAHL AFR  +Y+  +E +++ STS G++GG
Sbjct:  913 YARCTRSVSIVPPAYYAHLAAFRARYYMEGIEMSDSGSTSAGAAGG 958          
BLAST of mRNA_H-akashiwo_Contig1126.7.1 vs. uniprot
Match: UPI001C36130B (Uncharacterized protein n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001C36130B)

HSP 1 Score: 57.0 bits (136), Expect = 5.800e-8
Identity = 27/46 (58.70%), Postives = 37/46 (80.43%), Query Frame = 0
Query:    2 YTACTRSVSAVPPAFYAHLMAFRGAFYIHDMENTETTSTSNGSSGG 47
            Y  CTRSVS VPPA+YAHL+AFR  FY+ D E++E+ S ++G++GG
Sbjct:  148 YARCTRSVSIVPPAYYAHLVAFRARFYM-DPESSESGSMASGTAGG 192          
BLAST of mRNA_H-akashiwo_Contig1126.7.1 vs. uniprot
Match: A0A2K3PG38_TRIPR (Argonaute protein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3PG38_TRIPR)

HSP 1 Score: 57.4 bits (137), Expect = 7.160e-8
Identity = 30/72 (41.67%), Postives = 43/72 (59.72%), Query Frame = 0
Query:    2 YTACTRSVSAVPPAFYAHLMAFRGAFYIHDMENTETTSTSNGSSGGDERHEVNWSAHFNAPHPNVTQRMYFV 73
            Y  CTRSVS VPPA+YAHL+AFR  +Y+ D  +T  + ++NG +    R+  N  A   +   +V   M+FV
Sbjct:  369 YARCTRSVSIVPPAYYAHLLAFRARYYLSDAADTSDSGSANGGT----RNATNVVAALPSIIESVKDNMFFV 436          
BLAST of mRNA_H-akashiwo_Contig1126.7.1 vs. uniprot
Match: A0A6P5XMM0_DURZI (protein argonaute 5-like isoform X1 n=2 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P5XMM0_DURZI)

HSP 1 Score: 57.4 bits (137), Expect = 7.400e-8
Identity = 28/49 (57.14%), Postives = 35/49 (71.43%), Query Frame = 0
Query:    2 YTACTRSVSAVPPAFYAHLMAFRGAFYIHDMENTETTSTSNGSSGGDER 50
            Y  CTRSVS VPPA+YAHL AFR  +Y+ D EN+++ ST   S+GG  R
Sbjct:  905 YARCTRSVSIVPPAYYAHLAAFRARYYVED-ENSDSGSTGGESTGGGRR 952          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1126.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3V009_HETAK4.810e-3988.00Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S3UXA3_HETAK1.360e-3588.00Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
C0PNQ0_MAIZE1.760e-857.45Piwi domain-containing protein n=1 Tax=Zea mays Ta... [more]
A0A1D6P2M1_MAIZE2.120e-857.45Argonaute101 n=10 Tax=PACMAD clade TaxID=147370 Re... [more]
A0A1D6LSF6_MAIZE2.890e-860.87Argonaute10b n=3 Tax=Zea mays TaxID=4577 RepID=A0A... [more]
F0W310_9STRA2.910e-841.10Argonaute4 (AGO4) putative n=2 Tax=Albugo TaxID=65... [more]
A0A830C5V8_9LAMI3.960e-856.52Protein argonaute mel1 n=1 Tax=Phtheirospermum jap... [more]
UPI001C36130B5.800e-858.70Uncharacterized protein n=1 Tax=Carya illinoinensi... [more]
A0A2K3PG38_TRIPR7.160e-841.67Argonaute protein n=1 Tax=Trifolium pratense TaxID... [more]
A0A6P5XMM0_DURZI7.400e-857.14protein argonaute 5-like isoform X1 n=2 Tax=Durio ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..73
e-value: 4.0E-15
score: 58.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1126contigH-akashiwo_Contig1126:203493..204012 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1126.7.1mRNA_H-akashiwo_Contig1126.7.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1126 203270..204013 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1126.7.1 ID=prot_H-akashiwo_Contig1126.7.1|Name=mRNA_H-akashiwo_Contig1126.7.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=74bp
MYTACTRSVSAVPPAFYAHLMAFRGAFYIHDMENTETTSTSNGSSGGDER
HEVNWSAHFNAPHPNVTQRMYFV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf