prot_H-akashiwo_Contig1116.1.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1116.1.1
Unique Nameprot_H-akashiwo_Contig1116.1.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length117
Homology
BLAST of mRNA_H-akashiwo_Contig1116.1.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK)

HSP 1 Score: 190 bits (482), Expect = 1.900e-57
Identity = 90/115 (78.26%), Postives = 104/115 (90.43%), Query Frame = 0
Query:    2 LGDSPIVWSSKLQTAVSTSTVEAGYLALRSPMKDIMWLRHLLADLGCPQPEPNPVVEDNSACIEWANDMVVSRKNRHFHVSYHLAKERVNLGTIQMCYTKTSDQLADIFTKALNA 116
            LGD+PIVWSSKLQ AV+TSTVEA YLALRS +KDIMWLR LL ++GCPQ EP PVVEDNSAC+EWANDM+V+++NRHFHVSYHLAKE+V+LGTI+M Y KT DQ+ADI TKALNA
Sbjct:  223 LGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNA 337          
BLAST of mRNA_H-akashiwo_Contig1116.1.1 vs. uniprot
Match: A0A1J3JFW6_NOCCA (Copia protein (Fragment) n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3JFW6_NOCCA)

HSP 1 Score: 100 bits (250), Expect = 1.290e-24
Identity = 51/116 (43.97%), Postives = 71/116 (61.21%), Query Frame = 0
Query:    2 LGDSPIVWSSKLQTAVSTSTVEAGYLALRSPMKDIMWLRHLLADLGCPQPEPNPVVEDNSACIEWANDMVVSRKNRHFHVSYHLAKERVNLGTIQMCYTKTSDQLADIFTKALNAE 117
            +G + + W SK Q  VS S+ EA Y A+R    ++MWL+ LL DLG   P P  +  DN A I  A++ V   + +H  V  H  +E++ LG I  CYTK+SDQLADIFTKA +++
Sbjct:   38 IGGNLVTWKSKKQKVVSCSSCEAEYRAMRRLTTELMWLKMLLKDLGIETPRPITMHCDNQAAIHIASNSVFHERTKHIEVDCHKVREQMQLGVILPCYTKSSDQLADIFTKAASSK 153          
BLAST of mRNA_H-akashiwo_Contig1116.1.1 vs. uniprot
Match: A0A8D8N898_CULPI (Copia protein n=1 Tax=Culex pipiens TaxID=7175 RepID=A0A8D8N898_CULPI)

HSP 1 Score: 99.0 bits (245), Expect = 6.430e-24
Identity = 47/114 (41.23%), Postives = 72/114 (63.16%), Query Frame = 0
Query:    3 GDSPIVWSSKLQTAVSTSTVEAGYLALRSPMKDIMWLRHLLADLGCPQPEPNPVVEDNSACIEWANDMVVSRKNRHFHVSYHLAKERVNLGTIQMCYTKTSDQLADIFTKALNA 116
            G++ I W+S+ QT VSTST+EA Y+AL   +++++WLR LLA+LG  Q  P  + EDN +C+++      +R+++H    +H  K+    G I + Y  T+D LADI TK L A
Sbjct:   32 GEATISWASRKQTCVSTSTMEAEYVALAEAVQEVVWLRRLLAELGEKQQTPTTIFEDNKSCLDFVALERQNRRSKHIDTKFHYIKDAATSGQIVLRYCTTTDMLADIMTKPLGA 145          
BLAST of mRNA_H-akashiwo_Contig1116.1.1 vs. uniprot
Match: A0A1J3J9E7_NOCCA (Copia protein (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3J9E7_NOCCA)

HSP 1 Score: 97.1 bits (240), Expect = 2.960e-23
Identity = 48/112 (42.86%), Postives = 68/112 (60.71%), Query Frame = 0
Query:    2 LGDSPIVWSSKLQTAVSTSTVEAGYLALRSPMKDIMWLRHLLADLGCPQPEPNPVVEDNSACIEWANDMVVSRKNRHFHVSYHLAKERVNLGTIQMCYTKTSDQLADIFTKA 113
            +G + + W SK Q  VS S+ EA Y A+R    ++MWL+ LL DLG   P P  +  DN A I  A++ V   + +H  V  H  +E++ LG I  CYT++++QLADIFTKA
Sbjct:   25 IGGNLVTWKSKKQQVVSCSSAEAEYRAMRKLTTELMWLKMLLKDLGIETPNPITMHCDNQAAIHIASNSVFHERTKHIEVDCHKVREQMKLGVILPCYTRSAEQLADIFTKA 136          
BLAST of mRNA_H-akashiwo_Contig1116.1.1 vs. uniprot
Match: A0A1J3D135_NOCCA (Copia protein (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3D135_NOCCA)

HSP 1 Score: 96.3 bits (238), Expect = 3.300e-23
Identity = 49/112 (43.75%), Postives = 67/112 (59.82%), Query Frame = 0
Query:    2 LGDSPIVWSSKLQTAVSTSTVEAGYLALRSPMKDIMWLRHLLADLGCPQPEPNPVVEDNSACIEWANDMVVSRKNRHFHVSYHLAKERVNLGTIQMCYTKTSDQLADIFTKA 113
            +G + + W SK Q  VS S+ EA Y A+R    ++MWL+ LL DLG   P P  +  DN A I  A++ V   + +H  V  H  +E++ LG I  CYT++ DQLADIFTKA
Sbjct:   21 VGGNLVTWKSKKQKVVSLSSTEAEYRAMRRLTTELMWLKMLLEDLGRETPTPITMHCDNQAAIHIASNSVFHERTKHIEVDCHKVREQMQLGVILPCYTRSEDQLADIFTKA 132          
BLAST of mRNA_H-akashiwo_Contig1116.1.1 vs. uniprot
Match: A0A427XXX1_9TREE (Uncharacterized protein n=2 Tax=Saitozyma podzolica TaxID=1890683 RepID=A0A427XXX1_9TREE)

HSP 1 Score: 96.7 bits (239), Expect = 7.140e-23
Identity = 47/114 (41.23%), Postives = 71/114 (62.28%), Query Frame = 0
Query:    1 MLGDSPIVWSSKLQTAVSTSTVEAGYLALRSPMKDIMWLRHLLADLGCPQPEPNPVVEDNSACIEWANDMVVSRKNRHFHVSYHLAKERVNLGTIQMCYTKTSDQLADIFTKAL 114
            MLG S IVW+S+ Q  V++STVEA Y+A+    ++ +WL+ LL +LG    EP P+  DN   I  A +    R+ +H  + +HL +E +  G +++ Y  T+ Q+ADIFTKAL
Sbjct:   38 MLGGSAIVWTSRRQATVASSTVEAEYVAVSEAAREAVWLKGLLDELGVTPKEPTPLWCDNQGAIRLARNPGTHRRTKHIAIRWHLIRELIEDGVVRLGYVPTASQVADIFTKAL 151          
BLAST of mRNA_H-akashiwo_Contig1116.1.1 vs. uniprot
Match: A0A8J4LUU8_9CHLO (Integrase catalytic domain-containing protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4LUU8_9CHLO)

HSP 1 Score: 101 bits (252), Expect = 1.130e-22
Identity = 52/114 (45.61%), Postives = 70/114 (61.40%), Query Frame = 0
Query:    1 MLGDSPIVWSSKLQTAVSTSTVEAGYLALRSPMKDIMWLRHLLADLGCPQPEPNPVVEDNSACIEWANDMVVSRKNRHFHVSYHLAKERVNLGTIQMCYTKTSDQLADIFTKAL 114
            +LG   I WSSKLQ+ V+TST EA Y+A  S +K+ +WLRHLL DLG  +    P+  DN ACI      + S + +H  V +H A+ERV  G ++M    T DQ++D  TKAL
Sbjct: 1340 VLGGGAISWSSKLQSTVATSTAEAEYMAAASTIKEALWLRHLLHDLGL-EVTSVPIKCDNRACISMLESPISSARTKHIDVCHHFARERVERGEVRMVQCSTLDQMSDFLTKAL 1452          
BLAST of mRNA_H-akashiwo_Contig1116.1.1 vs. uniprot
Match: A0A1J3E1G7_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3E1G7_NOCCA)

HSP 1 Score: 101 bits (251), Expect = 1.490e-22
Identity = 51/116 (43.97%), Postives = 72/116 (62.07%), Query Frame = 0
Query:    2 LGDSPIVWSSKLQTAVSTSTVEAGYLALRSPMKDIMWLRHLLADLGCPQPEPNPVVEDNSACIEWANDMVVSRKNRHFHVSYHLAKERVNLGTIQMCYTKTSDQLADIFTKALNAE 117
            +G + + W SK Q  VS S+ EA Y A+R    ++MWL+ LL DLG   P+P  +  DN A I  A++ V   + +H  V  H  +E++ LG I  CYTK+SDQLADIFTKA +++
Sbjct:  714 IGGNLVTWKSKKQKVVSCSSCEAEYRAMRRLTTELMWLKMLLKDLGIETPKPITMHCDNQAAIHIASNSVFHERTKHIEVDCHKVREQMQLGVILPCYTKSSDQLADIFTKAASSK 829          
BLAST of mRNA_H-akashiwo_Contig1116.1.1 vs. uniprot
Match: A0A1J3H758_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=3 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3H758_NOCCA)

HSP 1 Score: 101 bits (251), Expect = 1.500e-22
Identity = 51/116 (43.97%), Postives = 72/116 (62.07%), Query Frame = 0
Query:    2 LGDSPIVWSSKLQTAVSTSTVEAGYLALRSPMKDIMWLRHLLADLGCPQPEPNPVVEDNSACIEWANDMVVSRKNRHFHVSYHLAKERVNLGTIQMCYTKTSDQLADIFTKALNAE 117
            +G + + W SK Q  VS S+ EA Y A+R    ++MWL+ LL DLG   P+P  +  DN A I  A++ V   + +H  V  H  +E++ LG I  CYTK+SDQLADIFTKA +++
Sbjct:  775 IGGNLVTWKSKKQKVVSCSSCEAEYRAMRRLTTELMWLKMLLKDLGIETPKPITMHCDNQAAIHIASNSVFHERTKHIEVDCHKVREQMQLGVILPCYTKSSDQLADIFTKATSSK 890          
BLAST of mRNA_H-akashiwo_Contig1116.1.1 vs. uniprot
Match: A0A427YPN6_9TREE (Uncharacterized protein n=1 Tax=Saitozyma podzolica TaxID=1890683 RepID=A0A427YPN6_9TREE)

HSP 1 Score: 96.7 bits (239), Expect = 1.520e-22
Identity = 47/114 (41.23%), Postives = 71/114 (62.28%), Query Frame = 0
Query:    1 MLGDSPIVWSSKLQTAVSTSTVEAGYLALRSPMKDIMWLRHLLADLGCPQPEPNPVVEDNSACIEWANDMVVSRKNRHFHVSYHLAKERVNLGTIQMCYTKTSDQLADIFTKAL 114
            MLG S IVW+S+ Q  V++STVEA Y+A+    ++ +WL+ LL +LG    EP P+  DN   I  A +    R+ +H  + +HL +E +  G +++ Y  T+ Q+ADIFTKAL
Sbjct:    1 MLGGSAIVWTSRRQATVASSTVEAEYVAVSEAAREAVWLKGLLDELGVTPKEPTPLWCDNQGAIRLARNPGTHRRTKHIAIRWHLIRELIEDGVVRLGYVPTASQVADIFTKAL 114          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1116.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4DD78_HETAK1.900e-5778.26Hypothetical protein n=4 Tax=Heterosigma akashiwo ... [more]
A0A1J3JFW6_NOCCA1.290e-2443.97Copia protein (Fragment) n=2 Tax=Noccaea caerulesc... [more]
A0A8D8N898_CULPI6.430e-2441.23Copia protein n=1 Tax=Culex pipiens TaxID=7175 Rep... [more]
A0A1J3J9E7_NOCCA2.960e-2342.86Copia protein (Fragment) n=1 Tax=Noccaea caerulesc... [more]
A0A1J3D135_NOCCA3.300e-2343.75Copia protein (Fragment) n=1 Tax=Noccaea caerulesc... [more]
A0A427XXX1_9TREE7.140e-2341.23Uncharacterized protein n=2 Tax=Saitozyma podzolic... [more]
A0A8J4LUU8_9CHLO1.130e-2245.61Integrase catalytic domain-containing protein n=2 ... [more]
A0A1J3E1G7_NOCCA1.490e-2243.97Retrovirus-related Pol polyprotein from transposon... [more]
A0A1J3H758_NOCCA1.500e-2243.97Retrovirus-related Pol polyprotein from transposon... [more]
A0A427YPN6_9TREE1.520e-2241.23Uncharacterized protein n=1 Tax=Saitozyma podzolic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 1..117
e-value: 2.72608E-46
score: 144.148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1116contigH-akashiwo_Contig1116:13196..13546 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1116.1.1mRNA_H-akashiwo_Contig1116.1.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1116 13196..13570 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1116.1.1 ID=prot_H-akashiwo_Contig1116.1.1|Name=mRNA_H-akashiwo_Contig1116.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=117bp
MLGDSPIVWSSKLQTAVSTSTVEAGYLALRSPMKDIMWLRHLLADLGCPQ
PEPNPVVEDNSACIEWANDMVVSRKNRHFHVSYHLAKERVNLGTIQMCYT
KTSDQLADIFTKALNAE
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