prot_H-akashiwo_Contig1107.4.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1107.4.1
Unique Nameprot_H-akashiwo_Contig1107.4.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length314
Homology
BLAST of mRNA_H-akashiwo_Contig1107.4.1 vs. uniprot
Match: A0A7S3XVA0_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVA0_HETAK)

HSP 1 Score: 464 bits (1195), Expect = 5.670e-160
Identity = 221/315 (70.16%), Postives = 269/315 (85.40%), Query Frame = 0
Query:    1 LLDLLWKYKEVFIAPNKIPTTTPLVSHAIQS-EGVAYTKPYRIPPAHQEKAEEMVDELLKQGVIEESSSEFNAPIVLVQKKTGDLRMCLDLRSLNQITKKAKFPLPTTREMFDQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWKVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPKGVEWTDDCEWSWQTLK 314
            +++LLW+Y++VF AP  IPTTTPL++HAIQS + VAY KPYR+ PA  +KAEE+ ++LLKQGVI ESSS FNAPIV+V KK+G+ RMCLDLR+LN IT  +KFPLPT REMFD LA ++YF+S+DMLWAYWS+PLRE D+ KTAFT+RN+KY + VMCFGLTNAPATFSHLVNKVFQG   +FALCFLDDVL +S + F+ HL +L +IFKRM AANLKFKLPKC+FGA+Q+P+LGH+ +REG+KPDPKKIEAV+ +RRP SKKQVRQ LGLASYYRQFV  F+ IA PLY+LTKD PKGV W DDCEW++Q +K
Sbjct:   63 MMELLWQYQDVFKAPEGIPTTTPLITHAIQSGDKVAYVKPYRMSPAQLQKAEEITEDLLKQGVISESSSNFNAPIVMVAKKSGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREGLKPDPKKIEAVRKLRRPESKKQVRQLLGLASYYRQFVPNFASIAAPLYKLTKDKPKGVLWDDDCEWAFQEIK 377          
BLAST of mRNA_H-akashiwo_Contig1107.4.1 vs. uniprot
Match: A0A7S3XV63_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV63_HETAK)

HSP 1 Score: 467 bits (1201), Expect = 2.920e-158
Identity = 223/315 (70.79%), Postives = 269/315 (85.40%), Query Frame = 0
Query:    1 LLDLLWKYKEVFIAPNKIPTTTPLVSHAIQS-EGVAYTKPYRIPPAHQEKAEEMVDELLKQGVIEESSSEFNAPIVLVQKKTGDLRMCLDLRSLNQITKKAKFPLPTTREMFDQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWKVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPKGVEWTDDCEWSWQTLK 314
            +LDLLW+Y++VF AP  IPTTTPL++HAIQS + VAY KPYR+ PA  +KAEE+ ++LLKQGVI ESSS FNAPIV+V KK+G+ RMCLDLR+LN IT  +KFPLPT REMFD LA ++YF+S+DMLWAYWS+PLRE D+ KTAFT+RN+KY + VMCFGLTNAPATFSHLVNKVFQG   +FALCFLDDVL +S + F+ HL +L +IFKRM AANLKFKLPKC+FGA+Q+P+LGH+ +REG+KPDPKKIEAV+ +RRP SKKQVRQ LGLASYYRQFV  F+ IA PLY+LTKD PKGV W DDCEW++Q +K
Sbjct:   63 MLDLLWQYQDVFKAPEGIPTTTPLITHAIQSGDKVAYVKPYRMSPAQLQKAEEITEDLLKQGVISESSSNFNAPIVMVAKKSGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREGLKPDPKKIEAVRKLRRPESKKQVRQLLGLASYYRQFVPNFASIAAPLYKLTKDKPKGVLWDDDCEWAFQEIK 377          
BLAST of mRNA_H-akashiwo_Contig1107.4.1 vs. uniprot
Match: A0A7S3XU57_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU57_HETAK)

HSP 1 Score: 386 bits (992), Expect = 8.680e-132
Identity = 182/239 (76.15%), Postives = 208/239 (87.03%), Query Frame = 0
Query:   76 LVQKKTGDLRMCLDLRSLNQITKKAKFPLPTTREMFDQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWKVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPKGVEWTDDCEWSWQTLK 314
            +V+KKTG+ RMCLDLRSLN IT  AKFPLPT REMFDQL G++YFSS+DMLWAYWS+PLR+ D+HKTAFT+RNKKY + VMCFGLTNAPATFSHLVNKVFQG  +DFALCFLDDVL ++G +FS HL  LE+IF RMI ANLKFKLPKCLFGA+QVP+LGHI TREG+KPDPKKIEA+K ++RP +KKQVRQ LGLASYYRQFV  F+  A PLY LTK  PKGVEWTDDCEW++Q LK
Sbjct:    1 MVKKKTGETRMCLDLRSLNAITTPAKFPLPTPREMFDQLEGAYYFSSLDMLWAYWSVPLRDEDKHKTAFTVRNKKYAFNVMCFGLTNAPATFSHLVNKVFQGCQHDFALCFLDDVLCYTGPDFSLHLRQLEEIFIRMIKANLKFKLPKCLFGAAQVPFLGHIATREGLKPDPKKIEAIKKLQRPQTKKQVRQVLGLASYYRQFVPNFAATAAPLYTLTKKEPKGVEWTDDCEWAFQNLK 239          
BLAST of mRNA_H-akashiwo_Contig1107.4.1 vs. uniprot
Match: A0A4Y2NDG8_ARAVE (Retrovirus-related Pol polyprotein from transposon 17.6 n=2 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2NDG8_ARAVE)

HSP 1 Score: 253 bits (647), Expect = 1.570e-79
Identity = 129/276 (46.74%), Postives = 184/276 (66.67%), Query Frame = 0
Query:   39 PYRIPPAHQEKAEEMVDELLKQGVIEESSSEFNAPIVLVQKKTGDLRMCLDLRSLNQITKKAKFPLPTTREMFDQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWKVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPKGVEWTDDCEWSWQTLK 314
            P  +P A +E+A+ +V E++  G+IEESS  + +PIVLV+KK G  R C+D R LN+ITKK  +PLP   +  D L GS +F+++D+   YW I +R  DR KTAFT     + +KVM FGL NAPATF  L+  V +G +++  L +LDD++   G+ F  HL NL K+F+R+  ANLK  L KC F   +V +LGH+I+ EG+K DP+KI+AV    RP +   +R FLGL +YYR+FV+ FS IA+PL++LT +T     WT++CE S+ +LK
Sbjct:   18 PRHLPLARKEEADHLVKEMVDNGIIEESSGPWASPIVLVKKKDGSTRFCVDYRKLNEITKKDSYPLPRIDDTLDALNGSQWFTTLDLKSGYWQIEIRPEDREKTAFTTGQGLWQFKVMPFGLCNAPATFERLMETVLRGLSSEACLVYLDDIII-VGRTFEEHLNNLRKVFQRLQKANLKLNLKKCRFFQKEVTYLGHVISAEGVKTDPEKIKAVVDWPRPKTVHDLRSFLGLCTYYRRFVKNFSTIARPLHKLT-ETKSNFNWTEECEKSFNSLK 291          
BLAST of mRNA_H-akashiwo_Contig1107.4.1 vs. uniprot
Match: A0A4Y1ZZ71_ARAVE (Retrovirus-related Pol polyprotein from transposon 297 (Fragment) n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y1ZZ71_ARAVE)

HSP 1 Score: 251 bits (641), Expect = 1.770e-77
Identity = 128/276 (46.38%), Postives = 183/276 (66.30%), Query Frame = 0
Query:   39 PYRIPPAHQEKAEEMVDELLKQGVIEESSSEFNAPIVLVQKKTGDLRMCLDLRSLNQITKKAKFPLPTTREMFDQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWKVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPKGVEWTDDCEWSWQTLK 314
            P R+P A +E+AE +V E++  G+IEESS  + +PIVLV+KK G  R C+D R LN+ITKK  +PLP   +  D L GS +F+++D+   YW + +R  DR KTAFT     + +KVM FGL NAPATF  L+  V +G +++  L +LDD++   G+ F  HL NL K+F+++  ANLK    KC F   +V +LGH+I+ EG+K DP KI+AV    RP +   +R FLGL +YYR+FV+ FS IA+PL++LT +T     WT++CE S+ +LK
Sbjct:  104 PRRLPLARKEEAEHLVQEMVDNGIIEESSGPWASPIVLVKKKDGSTRFCVDYRKLNEITKKDSYPLPRIDDTLDALNGSQWFTTLDLKSGYWQVEVRPEDREKTAFTTGQGLWQFKVMPFGLCNAPATFERLMETVLRGLSSEACLVYLDDIII-VGRTFEEHLSNLRKVFQKLQNANLKLSPKKCRFFQKEVTYLGHVISAEGVKTDPGKIKAVVDWPRPETIHDLRSFLGLCTYYRRFVKNFSRIARPLHKLT-ETKSNFNWTEECEKSFNSLK 377          
BLAST of mRNA_H-akashiwo_Contig1107.4.1 vs. uniprot
Match: A0A4Y2I107_ARAVE (Retrovirus-related Pol polyprotein from transposon 297 n=2 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2I107_ARAVE)

HSP 1 Score: 254 bits (650), Expect = 1.690e-76
Identity = 130/276 (47.10%), Postives = 183/276 (66.30%), Query Frame = 0
Query:   39 PYRIPPAHQEKAEEMVDELLKQGVIEESSSEFNAPIVLVQKKTGDLRMCLDLRSLNQITKKAKFPLPTTREMFDQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWKVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPKGVEWTDDCEWSWQTLK 314
            P R+P A +E+A+ +V E++  G+IEESS  + +PIVLV+KK G  R C+D R LN+ITKK  +PLP   +  D L GS +F+++D+   YW I +R  DR KTAFT     + +KVM FGL NAP TF  L+  V +G +++  L +LDD++   G+ F  HL NL K+F+R+  ANLK  L KC F   +V +LGH+I+ EG+K DP+KI+AV    RP +   +R FLGL +YYR+FV+ FS IAKPLY+LT +      WT++CE S+ +LK
Sbjct:  106 PRRLPLARKEEADNLVKEMVDNGIIEESSGPWASPIVLVKKKDGSTRFCVDYRKLNEITKKDSYPLPRIDDTLDALNGSQWFTTLDLKSGYWQIEIRPEDREKTAFTTGQGLWQFKVMPFGLCNAPETFERLMETVLRGLSSEACLVYLDDIII-VGRTFEEHLNNLRKVFQRLQKANLKLNLKKCRFFQKEVTYLGHVISAEGVKTDPEKIKAVVDWPRPETVHDLRSFLGLCTYYRRFVKNFSTIAKPLYKLT-EAKSNFNWTEECEKSFNSLK 379          
BLAST of mRNA_H-akashiwo_Contig1107.4.1 vs. uniprot
Match: A0A4Y2QUF0_ARAVE (Retrovirus-related Pol polyprotein from transposon 297 n=2 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2QUF0_ARAVE)

HSP 1 Score: 246 bits (628), Expect = 1.930e-76
Identity = 128/276 (46.38%), Postives = 181/276 (65.58%), Query Frame = 0
Query:   39 PYRIPPAHQEKAEEMVDELLKQGVIEESSSEFNAPIVLVQKKTGDLRMCLDLRSLNQITKKAKFPLPTTREMFDQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWKVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPKGVEWTDDCEWSWQTLK 314
            P R+P A +E AE +V+E+++ G+IEESS  + +PIVLV+KK G  R C+D R LN+ITKK  + LP   +  D L GS +F ++D+   YW + +R  DR KTAFT     + +KVM FGL NAPATF  L+  V +G +++  L +LDD++   G+ F  HL NL K+F+R+  ANLK    KC F   +V +LGH+I+ EG+K DP+KI+AV    RP     +R FLGL +YYR+FV+ FS IA+PL++LT +      WTD+CE S+ +LK
Sbjct:   18 PRRLPLARKE-AERLVNEMVENGIIEESSGPWASPIVLVKKKDGSTRFCVDYRKLNEITKKVSYRLPRIDDTLDSLNGSQWFMTLDLKSGYWQVEIRPEDREKTAFTTGQGLWQFKVMPFGLCNAPATFERLMETVLRGLSSEACLIYLDDIII-VGQTFEEHLNNLRKVFQRLQKANLKLNPKKCRFFQKEVAYLGHVISEEGVKTDPEKIKAVVDWPRPDKIHDIRSFLGLCTYYRRFVKNFSTIARPLHKLT-EAKSNFNWTDECEKSFNSLK 290          
BLAST of mRNA_H-akashiwo_Contig1107.4.1 vs. uniprot
Match: A0A4Y2QNW9_ARAVE (Retrovirus-related Pol polyprotein from transposon 297 (Fragment) n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2QNW9_ARAVE)

HSP 1 Score: 254 bits (650), Expect = 5.130e-76
Identity = 130/276 (47.10%), Postives = 184/276 (66.67%), Query Frame = 0
Query:   39 PYRIPPAHQEKAEEMVDELLKQGVIEESSSEFNAPIVLVQKKTGDLRMCLDLRSLNQITKKAKFPLPTTREMFDQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWKVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPKGVEWTDDCEWSWQTLK 314
            P R+P A +E+A+ +V E++  G+IEESS  + +PIVLV+KK G  R C+D R LN+ITKK  +PLP   +  D L GS +F+++D+   YW I +R  DR KTAFT     + +KVM FGL NAPATF  L+  V +G +++  L +LDD++   G+ F  HL NL K+F+R+  ANLK  L KC F   +V +LGH+I+ EG+K DP+KI+AV    RP +   +R FLGL +YYR+FV+ FS IAKPL++LT +      WT++CE S+ +LK
Sbjct:  270 PRRLPLARKEEADNLVKEMVDNGIIEESSGPWASPIVLVKKKDGSTRFCVDYRKLNEITKKDSYPLPRIDDTLDALNGSQWFTTLDLKSGYWQIEIRPEDREKTAFTTGQGLWQFKVMPFGLCNAPATFERLMETVLRGLSSEACLVYLDDIII-VGRTFEEHLNNLRKVFQRLQKANLKLNLKKCRFFQKEVTYLGHVISAEGVKTDPEKIKAVVDWPRPETVHDLRSFLGLCTYYRRFVKNFSTIAKPLHKLT-EAKSNFNWTEECEKSFNSLK 543          
BLAST of mRNA_H-akashiwo_Contig1107.4.1 vs. uniprot
Match: A0A4Y2HRQ6_ARAVE (Retrovirus-related Pol polyprotein from transposon 297 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2HRQ6_ARAVE)

HSP 1 Score: 251 bits (642), Expect = 8.010e-76
Identity = 128/276 (46.38%), Postives = 183/276 (66.30%), Query Frame = 0
Query:   39 PYRIPPAHQEKAEEMVDELLKQGVIEESSSEFNAPIVLVQKKTGDLRMCLDLRSLNQITKKAKFPLPTTREMFDQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWKVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPKGVEWTDDCEWSWQTLK 314
            P R+P A +E+AE +V+E+++ G+IEESS  + +PIVLV+KK G  R C+D R LN+ITKK  +PLP   +  D L GS +F+++D+   YW + +R  DR KTAFT  +  + + VM FGL NAPATF  L+  V +G +++  L +LDD++   G+ F  HL NL K+F+R+  ANLK    KC F   +V +LGH+I+ EG+K DP+KI+AV    RP     +R FLGL +YYR FV+ FS IA+PL++LT +      WTD+CE S+ +LK
Sbjct:  139 PRRLPLARKEEAERLVNEMVENGIIEESSGPWASPIVLVKKKDGSTRFCVDYRKLNEITKKDSYPLPRIDDTLDSLNGSQWFTTLDLKSGYWQVEIRPEDREKTAFTTGHGLWQFNVMPFGLCNAPATFERLMETVLRGLSSEACLIYLDDIII-VGQTFEEHLNNLRKVFQRIQKANLKLNPKKCRFFQKEVAYLGHVISEEGVKTDPEKIKAVVDWPRPDKIHDIRSFLGLCTYYRLFVKNFSTIARPLHKLT-EAKSNFNWTDECEKSFNSLK 412          
BLAST of mRNA_H-akashiwo_Contig1107.4.1 vs. uniprot
Match: A0A4Y2S6G1_ARAVE (Retrovirus-related Pol polyprotein from transposon 297 n=2 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2S6G1_ARAVE)

HSP 1 Score: 245 bits (625), Expect = 1.370e-75
Identity = 127/276 (46.01%), Postives = 181/276 (65.58%), Query Frame = 0
Query:   39 PYRIPPAHQEKAEEMVDELLKQGVIEESSSEFNAPIVLVQKKTGDLRMCLDLRSLNQITKKAKFPLPTTREMFDQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWKVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPKGVEWTDDCEWSWQTLK 314
            P R+P A +E+A+ +V E++   +IEESS  + +PIVLV+KK G  R C+D R LN+ITKK  +PLP   +  D L GS +F+++D+   YW I +R  DR KTAFT     + +KVM FGL NAPATF  L+  V +G +++  L +LDD++   G+ F  HL NL K+F+R+  ANLK  L K  F   +V +LGH+I+ EG+K DP+KI+AV    RP +   +R FLGL +YYR+FV+ FS IAKPL++LT +      W ++CE S+ +LK
Sbjct:   18 PRRLPLARKEEADHLVKEMVDNEIIEESSGPWASPIVLVKKKDGSTRFCVDYRKLNEITKKDSYPLPRIDDTLDALNGSQWFTTLDLKSGYWQIEIRPEDREKTAFTTGQGLWQFKVMPFGLCNAPATFERLMETVLRGLSSEACLVYLDDIII-VGRTFEEHLNNLRKVFQRLQKANLKLNLKKWRFFQKEVTYLGHVISAEGVKTDPEKIKAVVDWPRPETVHDLRSFLGLCTYYRRFVKNFSTIAKPLHKLT-EAKSNFNWLEECEKSFNSLK 291          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1107.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3XVA0_HETAK5.670e-16070.16Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S3XV63_HETAK2.920e-15870.79Hypothetical protein (Fragment) n=3 Tax=Heterosigm... [more]
A0A7S3XU57_HETAK8.680e-13276.15Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4Y2NDG8_ARAVE1.570e-7946.74Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Y1ZZ71_ARAVE1.770e-7746.38Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Y2I107_ARAVE1.690e-7647.10Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Y2QUF0_ARAVE1.930e-7646.38Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Y2QNW9_ARAVE5.130e-7647.10Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Y2HRQ6_ARAVE8.010e-7646.38Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Y2S6G1_ARAVE1.370e-7546.01Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 77..238
e-value: 1.1E-21
score: 77.4
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 58..238
score: 10.946016
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 102..238
e-value: 2.8E-69
score: 234.6
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 248..314
e-value: 2.2E-21
score: 77.7
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 34..162
e-value: 2.8E-69
score: 234.6
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 37..308
NoneNo IPR availablePANTHERPTHR24559:SF363SUBFAMILY NOT NAMEDcoord: 37..308
NoneNo IPR availableCDDcd01647RT_LTRcoord: 61..238
e-value: 8.35029E-72
score: 217.848
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 4..314

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1107contigH-akashiwo_Contig1107:228305..229246 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1107.4.1mRNA_H-akashiwo_Contig1107.4.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1107 228305..229246 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1107.4.1 ID=prot_H-akashiwo_Contig1107.4.1|Name=mRNA_H-akashiwo_Contig1107.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=314bp
LLDLLWKYKEVFIAPNKIPTTTPLVSHAIQSEGVAYTKPYRIPPAHQEKA
EEMVDELLKQGVIEESSSEFNAPIVLVQKKTGDLRMCLDLRSLNQITKKA
KFPLPTTREMFDQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKK
YCWKVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFST
HLLNLEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREGIKPDPKKI
EAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPKGV
EWTDDCEWSWQTLK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
IPR043128Rev_trsase/Diguanyl_cyclase
IPR043502DNA/RNA_pol_sf