prot_H-akashiwo_Contig11.110.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig11.110.1
Unique Nameprot_H-akashiwo_Contig11.110.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length236
Homology
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BLAST of mRNA_H-akashiwo_Contig11.110.1 vs. uniprot
Match: A0A6T5PW52_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5PW52_HETAK)

HSP 1 Score: 69.3 bits (168), Expect = 3.220e-10
Identity = 65/195 (33.33%), Postives = 93/195 (47.69%), Query Frame = 0 
Query:   43 EFLNAWSMLAPSLISVVYGNQACLDHNYCKFLY-YHAMVHLPFSFGFHLYHVFR-PMR-QYGISLKLRQLDNIFAHVAGTMISYGNSQSEIYTAFAAVANAYWIYAILQDGRRPRV---DNMGYCILMYTAPMLYNGQWCLYALTLAGFALSIWVFA-----RKVCAP-----VH---HPLMHLLLAIPQYGMLM 218
            E L A +MLAP LIS    N   ++ ++  FL   H  +H PFS   H+      P R   G  L  R+LD  F   +  +++YG S+SE +   A + NA  IY I  +  RP+     + G  +L Y   +L  G    +ALT A F  +  V+      R    P     VH   HP MH+LLA+PQ+ M++
Sbjct:  115 EILAAITMLAPCLIS---WNFLRVNSDWYSFLVALHTFIHTPFSVLHHINLATNDPYRGNAGRGLVFRRLDYTFIQFSCFLLTYGLSRSEAWGLAAFLFNARAIYRIWTNPLRPQKPSHSDQGLGVLAYVGALLARGHVVEFALTFAAFVAAFAVYKHGRGKRSKGEPGDARTVHNYCHPAMHMLLAVPQFFMMV 306
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig11.110.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6T5PW52_HETAK3.220e-1033.33Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig11contigH-akashiwo_Contig11:4800334..4823010 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig11.110.1mRNA_H-akashiwo_Contig11.110.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig11 4800024..4823129 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig11.110.1 ID=prot_H-akashiwo_Contig11.110.1|Name=mRNA_H-akashiwo_Contig11.110.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=236bp
MDAPKDNVVVEKQQQFEKTSFQVAQIQEVSSEKKWTISFDMIEFLNAWSM
LAPSLISVVYGNQACLDHNYCKFLYYHAMVHLPFSFGFHLYHVFRPMRQY
GISLKLRQLDNIFAHVAGTMISYGNSQSEIYTAFAAVANAYWIYAILQDG
RRPRVDNMGYCILMYTAPMLYNGQWCLYALTLAGFALSIWVFARKVCAPV
HHPLMHLLLAIPQYGMLMGLIATLQQSSDHCPFLF*
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