prot_H-akashiwo_Contig1092.4.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1092.4.1
Unique Nameprot_H-akashiwo_Contig1092.4.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length188
Homology
BLAST of mRNA_H-akashiwo_Contig1092.4.1 vs. uniprot
Match: A0A7S3XU57_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU57_HETAK)

HSP 1 Score: 306 bits (784), Expect = 2.550e-102
Identity = 145/188 (77.13%), Postives = 166/188 (88.30%), Query Frame = 0
Query:    1 RCLNQITKKAKFPLPTTREMFDQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWKVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNMEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQF 188
            R LN IT  AKFPLPT REMFDQL G++YFSS+DMLWAYWS+PLR+ D+HKTAFT+RNKKY + VMCFGLTNAPATFSHLVNKVFQG  +DFALCFLDDVL ++G +FS HL  +E+IF RMI ANLKFKLPKCLFGA+QVP+LGHI TREG+KPDPKKIEA+K ++RP +KKQVRQ LGLASYYRQF
Sbjct:   16 RSLNAITTPAKFPLPTPREMFDQLEGAYYFSSLDMLWAYWSVPLRDEDKHKTAFTVRNKKYAFNVMCFGLTNAPATFSHLVNKVFQGCQHDFALCFLDDVLCYTGPDFSLHLRQLEEIFIRMIKANLKFKLPKCLFGAAQVPFLGHIATREGLKPDPKKIEAIKKLQRPQTKKQVRQVLGLASYYRQF 203          
BLAST of mRNA_H-akashiwo_Contig1092.4.1 vs. uniprot
Match: A0A7S3XVA0_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVA0_HETAK)

HSP 1 Score: 292 bits (748), Expect = 1.630e-94
Identity = 137/188 (72.87%), Postives = 163/188 (86.70%), Query Frame = 0
Query:    1 RCLNQITKKAKFPLPTTREMFDQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWKVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNMEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQF 188
            R LN IT  +KFPLPT REMFD LA ++YF+S+DMLWAYWS+PLRE D+ KTAFT+RN+KY + VMCFGLTNAPATFSHLVNKVFQG   +FALCFLDDVL +S + F+ HL ++ +IFKRM AANLKFKLPKC+FGA+Q+P+LGH+ +REG+KPDPKKIEAV+ +RRP SKKQVRQ LGLASYYRQF
Sbjct:  154 RALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREGLKPDPKKIEAVRKLRRPESKKQVRQLLGLASYYRQF 341          
BLAST of mRNA_H-akashiwo_Contig1092.4.1 vs. uniprot
Match: A0A7S3XV63_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV63_HETAK)

HSP 1 Score: 292 bits (748), Expect = 1.960e-92
Identity = 137/188 (72.87%), Postives = 163/188 (86.70%), Query Frame = 0
Query:    1 RCLNQITKKAKFPLPTTREMFDQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWKVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNMEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQF 188
            R LN IT  +KFPLPT REMFD LA ++YF+S+DMLWAYWS+PLRE D+ KTAFT+RN+KY + VMCFGLTNAPATFSHLVNKVFQG   +FALCFLDDVL +S + F+ HL ++ +IFKRM AANLKFKLPKC+FGA+Q+P+LGH+ +REG+KPDPKKIEAV+ +RRP SKKQVRQ LGLASYYRQF
Sbjct:  154 RALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREGLKPDPKKIEAVRKLRRPESKKQVRQLLGLASYYRQF 341          
BLAST of mRNA_H-akashiwo_Contig1092.4.1 vs. uniprot
Match: A0A4Y2NDG8_ARAVE (Retrovirus-related Pol polyprotein from transposon 17.6 n=2 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2NDG8_ARAVE)

HSP 1 Score: 171 bits (434), Expect = 2.040e-49
Identity = 87/188 (46.28%), Postives = 122/188 (64.89%), Query Frame = 0
Query:    1 RCLNQITKKAKFPLPTTREMFDQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWKVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNMEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQF 188
            R LN+ITKK  +PLP   +  D L GS +F+++D+   YW I +R  DR KTAFT     + +KVM FGL NAPATF  L+  V +G +++  L +LDD++   G+ F  HL N+ K+F+R+  ANLK  L KC F   +V +LGH+I+ EG+K DP+KI+AV    RP +   +R FLGL +YYR+F
Sbjct:   70 RKLNEITKKDSYPLPRIDDTLDALNGSQWFTTLDLKSGYWQIEIRPEDREKTAFTTGQGLWQFKVMPFGLCNAPATFERLMETVLRGLSSEACLVYLDDIII-VGRTFEEHLNNLRKVFQRLQKANLKLNLKKCRFFQKEVTYLGHVISAEGVKTDPEKIKAVVDWPRPKTVHDLRSFLGLCTYYRRF 256          
BLAST of mRNA_H-akashiwo_Contig1092.4.1 vs. uniprot
Match: A0A4Y2J202_ARAVE (Retrovirus-related Pol polyprotein from transposon 297 n=2 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2J202_ARAVE)

HSP 1 Score: 166 bits (420), Expect = 7.170e-48
Identity = 84/188 (44.68%), Postives = 119/188 (63.30%), Query Frame = 0
Query:    1 RCLNQITKKAKFPLPTTREMFDQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWKVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNMEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQF 188
            R LN+ITKK  +PLP   +  D L GS +F+++D+   YW + +R  DR KTAFT     + +KVM FGL NAPATF  L+  V +G +++  L +LDD++   G+ F  HL N+ K+F+R+  A LK    KC F   +V +LGH+I+ EG+K DP+KI+AV    RP     +R FLGL +YYR+F
Sbjct:   70 RKLNEITKKDSYPLPRIDDTLDSLNGSQWFTTLDLKSGYWQVEIRPEDREKTAFTTGQGLWQFKVMPFGLCNAPATFERLMETVLRGLSSEACLIYLDDIII-VGQTFEEHLNNLRKVFQRLQKAKLKLNPKKCRFFQKEVAYLGHVISEEGVKTDPEKIKAVVDWPRPDEIHDIRSFLGLCTYYRRF 256          
BLAST of mRNA_H-akashiwo_Contig1092.4.1 vs. uniprot
Match: A0A4Y2S6G1_ARAVE (Retrovirus-related Pol polyprotein from transposon 297 n=2 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2S6G1_ARAVE)

HSP 1 Score: 167 bits (423), Expect = 2.930e-47
Identity = 86/188 (45.74%), Postives = 121/188 (64.36%), Query Frame = 0
Query:    1 RCLNQITKKAKFPLPTTREMFDQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWKVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNMEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQF 188
            R LN+ITKK  +PLP   +  D L GS +F+++D+   YW I +R  DR KTAFT     + +KVM FGL NAPATF  L+  V +G +++  L +LDD++   G+ F  HL N+ K+F+R+  ANLK  L K  F   +V +LGH+I+ EG+K DP+KI+AV    RP +   +R FLGL +YYR+F
Sbjct:   70 RKLNEITKKDSYPLPRIDDTLDALNGSQWFTTLDLKSGYWQIEIRPEDREKTAFTTGQGLWQFKVMPFGLCNAPATFERLMETVLRGLSSEACLVYLDDIII-VGRTFEEHLNNLRKVFQRLQKANLKLNLKKWRFFQKEVTYLGHVISAEGVKTDPEKIKAVVDWPRPETVHDLRSFLGLCTYYRRF 256          
BLAST of mRNA_H-akashiwo_Contig1092.4.1 vs. uniprot
Match: A0A4Y2LUR4_ARAVE (RNA-directed DNA polymerase (Fragment) n=2 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2LUR4_ARAVE)

HSP 1 Score: 171 bits (434), Expect = 6.990e-47
Identity = 87/188 (46.28%), Postives = 122/188 (64.89%), Query Frame = 0
Query:    1 RCLNQITKKAKFPLPTTREMFDQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWKVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNMEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQF 188
            R LN+ITKK  +PLP   +  D L GS +F+++D+   YW I +R  DR KTAFT     + +KVM FGL NAPATF  L+  V +G +++  L +LDD++   G+ F  HL N+ K+F+R+  ANLK  L KC F   +V +LGH+I+ EG+K DP+KI+AV    RP +   +R FLGL +YYR+F
Sbjct:   24 RKLNEITKKDSYPLPRIDDTLDALNGSQWFTTLDLKSGYWQIEIRPEDREKTAFTTGQGLWQFKVMPFGLCNAPATFERLMETVLRGLSSEACLVYLDDIII-VGRTFEEHLNNLRKVFQRLQKANLKLNLKKCRFFQKEVTYLGHVISAEGVKTDPEKIKAVVDWPRPETVHDLRSFLGLCTYYRRF 210          
BLAST of mRNA_H-akashiwo_Contig1092.4.1 vs. uniprot
Match: A0A4Y2QUF0_ARAVE (Retrovirus-related Pol polyprotein from transposon 297 n=2 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2QUF0_ARAVE)

HSP 1 Score: 165 bits (417), Expect = 1.100e-46
Identity = 84/188 (44.68%), Postives = 118/188 (62.77%), Query Frame = 0
Query:    1 RCLNQITKKAKFPLPTTREMFDQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWKVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNMEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQF 188
            R LN+ITKK  + LP   +  D L GS +F ++D+   YW + +R  DR KTAFT     + +KVM FGL NAPATF  L+  V +G +++  L +LDD++   G+ F  HL N+ K+F+R+  ANLK    KC F   +V +LGH+I+ EG+K DP+KI+AV    RP     +R FLGL +YYR+F
Sbjct:   69 RKLNEITKKVSYRLPRIDDTLDSLNGSQWFMTLDLKSGYWQVEIRPEDREKTAFTTGQGLWQFKVMPFGLCNAPATFERLMETVLRGLSSEACLIYLDDIII-VGQTFEEHLNNLRKVFQRLQKANLKLNPKKCRFFQKEVAYLGHVISEEGVKTDPEKIKAVVDWPRPDKIHDIRSFLGLCTYYRRF 255          
BLAST of mRNA_H-akashiwo_Contig1092.4.1 vs. uniprot
Match: A0A4Y2QNW9_ARAVE (Retrovirus-related Pol polyprotein from transposon 297 (Fragment) n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2QNW9_ARAVE)

HSP 1 Score: 171 bits (434), Expect = 1.120e-46
Identity = 87/188 (46.28%), Postives = 122/188 (64.89%), Query Frame = 0
Query:    1 RCLNQITKKAKFPLPTTREMFDQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWKVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNMEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQF 188
            R LN+ITKK  +PLP   +  D L GS +F+++D+   YW I +R  DR KTAFT     + +KVM FGL NAPATF  L+  V +G +++  L +LDD++   G+ F  HL N+ K+F+R+  ANLK  L KC F   +V +LGH+I+ EG+K DP+KI+AV    RP +   +R FLGL +YYR+F
Sbjct:  322 RKLNEITKKDSYPLPRIDDTLDALNGSQWFTTLDLKSGYWQIEIRPEDREKTAFTTGQGLWQFKVMPFGLCNAPATFERLMETVLRGLSSEACLVYLDDIII-VGRTFEEHLNNLRKVFQRLQKANLKLNLKKCRFFQKEVTYLGHVISAEGVKTDPEKIKAVVDWPRPETVHDLRSFLGLCTYYRRF 508          
BLAST of mRNA_H-akashiwo_Contig1092.4.1 vs. uniprot
Match: A0A4Y2AYY6_ARAVE (RNA-directed DNA polymerase (Fragment) n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2AYY6_ARAVE)

HSP 1 Score: 173 bits (438), Expect = 1.370e-46
Identity = 87/188 (46.28%), Postives = 123/188 (65.43%), Query Frame = 0
Query:    1 RCLNQITKKAKFPLPTTREMFDQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWKVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNMEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITREGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQF 188
            R LN+ITKK  +PLP   +  D L GS +F+++D+   YW I +R  DR KTAFT     + +KVM FGL NAPATF  L+  V +G +++  L +LDD++   G+ F  HL N+ K+F+R+  ANLK  L KC+F   +V +LGH+I+ EG+K DP+KI+AV    RP +   +R FLGL +YYR+F
Sbjct:  255 RKLNEITKKDSYPLPRIDDTLDALNGSQWFTTLDLKSGYWQIEIRPEDREKTAFTTGQGLWQFKVMPFGLCNAPATFERLMETVLRGLSSEACLVYLDDIII-VGRTFEEHLNNLRKVFQRLQKANLKLNLKKCMFFQKEVTYLGHVISAEGVKTDPEKIKAVVDWPRPETVHDLRSFLGLCTYYRRF 441          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1092.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3XU57_HETAK2.550e-10277.13Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3XVA0_HETAK1.630e-9472.87Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S3XV63_HETAK1.960e-9272.87Hypothetical protein (Fragment) n=3 Tax=Heterosigm... [more]
A0A4Y2NDG8_ARAVE2.040e-4946.28Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Y2J202_ARAVE7.170e-4844.68Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Y2S6G1_ARAVE2.930e-4745.74Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Y2LUR4_ARAVE6.990e-4746.28RNA-directed DNA polymerase (Fragment) n=2 Tax=Ara... [more]
A0A4Y2QUF0_ARAVE1.100e-4644.68Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Y2QNW9_ARAVE1.120e-4646.28Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Y2AYY6_ARAVE1.370e-4646.28RNA-directed DNA polymerase (Fragment) n=1 Tax=Ara... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 158..188
e-value: 1.9E-7
score: 33.0
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 12..148
e-value: 1.6E-44
score: 153.7
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 1..148
e-value: 5.0E-19
score: 68.7
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..148
score: 9.593082
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 1..72
e-value: 1.6E-44
score: 153.7
NoneNo IPR availablePANTHERPTHR24559:SF324TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEINcoord: 1..188
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 1..188
NoneNo IPR availableCDDcd01647RT_LTRcoord: 1..148
e-value: 1.92085E-56
score: 173.936
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 1..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1092contigH-akashiwo_Contig1092:214420..214983 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1092.4.1mRNA_H-akashiwo_Contig1092.4.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1092 214420..214983 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1092.4.1 ID=prot_H-akashiwo_Contig1092.4.1|Name=mRNA_H-akashiwo_Contig1092.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=188bp
RCLNQITKKAKFPLPTTREMFDQLAGSWYFSSMDMLWAYWSIPLRETDRH
KTAFTLRNKKYCWKVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDV
LAHSGKEFSTHLLNMEKIFKRMIAANLKFKLPKCLFGASQVPWLGHIITR
EGIKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043128Rev_trsase/Diguanyl_cyclase
IPR000477RT_dom
IPR043502DNA/RNA_pol_sf