prot_H-akashiwo_Contig108.3.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-akashiwo_Contig108.3.1
Unique Name	prot_H-akashiwo_Contig108.3.1
Type	polypeptide
Organism	Heterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length	90

Homology

[Close]

BLAST of mRNA_H-akashiwo_Contig108.3.1 vs. uniprot
Match: W4HCB9_9STRA (Dynein light chain n=26 Tax=Oomycota TaxID=4762 RepID=W4HCB9_9STRA)

HSP 1 Score: 179 bits (455), Expect = 2.720e-57
Identity = 87/89 (97.75%), Postives = 88/89 (98.88%), Query Frame = 0

Query:    1 MSERKAVIKNADMAEDMQQDAVDCASQALERYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
            MSERKAVIKNADM EDMQQDAVDCASQALE+YNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MSERKAVIKNADMHEDMQQDAVDCASQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of mRNA_H-akashiwo_Contig108.3.1 vs. uniprot
Match: A0A2C9K100_BIOGL (Dynein light chain n=4 Tax=Euthyneura TaxID=216307 RepID=A0A2C9K100_BIOGL)

HSP 1 Score: 179 bits (455), Expect = 2.720e-57
Identity = 86/89 (96.63%), Postives = 89/89 (100.00%), Query Frame = 0

Query:    1 MSERKAVIKNADMAEDMQQDAVDCASQALERYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
            MSERKAVIKNADM+EDMQQDAVDCA+QALE+YNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MSERKAVIKNADMSEDMQQDAVDCATQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of mRNA_H-akashiwo_Contig108.3.1 vs. uniprot
Match: C1FDC9_MICCC (Dynein light chain n=2 Tax=Eukaryota TaxID=2759 RepID=C1FDC9_MICCC)

HSP 1 Score: 179 bits (454), Expect = 3.860e-57
Identity = 85/89 (95.51%), Postives = 89/89 (100.00%), Query Frame = 0

Query:    1 MSERKAVIKNADMAEDMQQDAVDCASQALERYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
            MSERKAVIKNADM+EDMQQDAVDCA+QALE+YNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVA+LLFKSG
Sbjct:    1 MSERKAVIKNADMSEDMQQDAVDCATQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKSG 89

[Close]

BLAST of mRNA_H-akashiwo_Contig108.3.1 vs. uniprot
Match: A0A485LAB0_9STRA (Dynein light chain n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LAB0_9STRA)

HSP 1 Score: 179 bits (455), Expect = 7.910e-57
Identity = 87/89 (97.75%), Postives = 88/89 (98.88%), Query Frame = 0

Query:    1 MSERKAVIKNADMAEDMQQDAVDCASQALERYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
            MSERKAVIKNADM EDMQQDAVDCASQALE+YNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:   35 MSERKAVIKNADMHEDMQQDAVDCASQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 123

[Close]

BLAST of mRNA_H-akashiwo_Contig108.3.1 vs. uniprot
Match: A0A6A3E1H5_9STRA (Dynein light chain n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3E1H5_9STRA)

HSP 1 Score: 179 bits (455), Expect = 1.020e-56
Identity = 87/89 (97.75%), Postives = 88/89 (98.88%), Query Frame = 0

Query:    1 MSERKAVIKNADMAEDMQQDAVDCASQALERYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
            MSERKAVIKNADM EDMQQDAVDCASQALE+YNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:   43 MSERKAVIKNADMHEDMQQDAVDCASQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 131

[Close]

BLAST of mRNA_H-akashiwo_Contig108.3.1 vs. uniprot
Match: C1ML17_MICPC (Dynein light chain n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1ML17_MICPC)

HSP 1 Score: 178 bits (451), Expect = 1.110e-56
Identity = 84/89 (94.38%), Postives = 89/89 (100.00%), Query Frame = 0

Query:    1 MSERKAVIKNADMAEDMQQDAVDCASQALERYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
            MSERKAVIKNADM+ED+QQDAVDCA+QALE+YNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVA+LLFKSG
Sbjct:    1 MSERKAVIKNADMSEDLQQDAVDCATQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKSG 89

[Close]

BLAST of mRNA_H-akashiwo_Contig108.3.1 vs. uniprot
Match: M4BH12_HYAAE (Dynein light chain n=5 Tax=Eukaryota TaxID=2759 RepID=M4BH12_HYAAE)

HSP 1 Score: 178 bits (451), Expect = 1.110e-56
Identity = 85/89 (95.51%), Postives = 88/89 (98.88%), Query Frame = 0

Query:    1 MSERKAVIKNADMAEDMQQDAVDCASQALERYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
            M+ERKAVIKNADM EDMQQDAVDCASQALE+YNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVA+LLFKSG
Sbjct:    1 MAERKAVIKNADMHEDMQQDAVDCASQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKSG 89

[Close]

BLAST of mRNA_H-akashiwo_Contig108.3.1 vs. uniprot
Match: H3BFR6_LATCH (Dynein light chain n=6 Tax=Eukaryota TaxID=2759 RepID=H3BFR6_LATCH)

HSP 1 Score: 179 bits (453), Expect = 1.240e-56
Identity = 86/89 (96.63%), Postives = 88/89 (98.88%), Query Frame = 0

Query:    1 MSERKAVIKNADMAEDMQQDAVDCASQALERYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
            MSERKAVIKNADM EDMQQDAVDCA+QALE+YNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:   27 MSERKAVIKNADMPEDMQQDAVDCATQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 115

[Close]

BLAST of mRNA_H-akashiwo_Contig108.3.1 vs. uniprot
Match: A0A7L9QEK2_9CHLO (Dynein light chain n=1 Tax=Trebouxia sp. TR9 TaxID=1825957 RepID=A0A7L9QEK2_9CHLO)

HSP 1 Score: 178 bits (452), Expect = 1.550e-56
Identity = 83/89 (93.26%), Postives = 89/89 (100.00%), Query Frame = 0

Query:    1 MSERKAVIKNADMAEDMQQDAVDCASQALERYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
            MSERKAVIKNADM+EDMQQDA+DCA+QALE+YN+EKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVA+LLFKSG
Sbjct:   23 MSERKAVIKNADMSEDMQQDAIDCATQALEKYNVEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKSG 111

[Close]

BLAST of mRNA_H-akashiwo_Contig108.3.1 vs. uniprot
Match: A0A401QGE4_SCYTO (Dynein light chain n=3 Tax=Chondrichthyes TaxID=7777 RepID=A0A401QGE4_SCYTO)

HSP 1 Score: 177 bits (450), Expect = 1.580e-56
Identity = 84/89 (94.38%), Postives = 89/89 (100.00%), Query Frame = 0

Query:    1 MSERKAVIKNADMAEDMQQDAVDCASQALERYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
            MS+RKAVIKNADM+EDMQQDAVDCA+QA+E+YNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

The following BLAST results are available for this feature:

BLAST of mRNA_H-akashiwo_Contig108.3.1 vs. uniprot

BLAST of mRNA_H-akashiwo_Contig108.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
W4HCB9_9STRA	2.720e-57	97.75	Dynein light chain n=26 Tax=Oomycota TaxID=4762 Re...	[more]
A0A2C9K100_BIOGL	2.720e-57	96.63	Dynein light chain n=4 Tax=Euthyneura TaxID=216307...	[more]
C1FDC9_MICCC	3.860e-57	95.51	Dynein light chain n=2 Tax=Eukaryota TaxID=2759 Re...	[more]
A0A485LAB0_9STRA	7.910e-57	97.75	Dynein light chain n=1 Tax=Aphanomyces stellatus T...	[more]
A0A6A3E1H5_9STRA	1.020e-56	97.75	Dynein light chain n=2 Tax=Phytophthora TaxID=4783...	[more]
C1ML17_MICPC	1.110e-56	94.38	Dynein light chain n=2 Tax=Micromonas pusilla TaxI...	[more]
M4BH12_HYAAE	1.110e-56	95.51	Dynein light chain n=5 Tax=Eukaryota TaxID=2759 Re...	[more]
H3BFR6_LATCH	1.240e-56	96.63	Dynein light chain n=6 Tax=Eukaryota TaxID=2759 Re...	[more]
A0A7L9QEK2_9CHLO	1.550e-56	93.26	Dynein light chain n=1 Tax=Trebouxia sp. TR9 TaxID...	[more]
A0A401QGE4_SCYTO	1.580e-56	94.38	Dynein light chain n=3 Tax=Chondrichthyes TaxID=77...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001372	Dynein light chain, type 1/2	SMART	SM01375	Dynein_light_2	coord: 1..88 e-value: 2.1E-61 score: 220.0
IPR001372	Dynein light chain, type 1/2	PFAM	PF01221	Dynein_light	coord: 5..88 e-value: 2.4E-42 score: 143.2
IPR001372	Dynein light chain, type 1/2	PANTHER	PTHR11886	DYNEIN LIGHT CHAIN	coord: 1..89
IPR037177	Dynein light chain superfamily	GENE3D	3.30.740.10	Protein Inhibitor Of Neuronal Nitric Oxide Synthase;	coord: 1..89 e-value: 3.4E-46 score: 157.4
IPR037177	Dynein light chain superfamily	SUPERFAMILY	54648	DLC	coord: 1..89
None	No IPR available	PANTHER	PTHR11886:SF62	DYNEIN LIGHT CHAIN	coord: 1..89
IPR019763	Dynein light chain, type 1/2, conserved site	PROSITE	PS01239	DYNEIN_LIGHT_1	coord: 55..69

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-akashiwo_Contig108	contig	H-akashiwo_Contig108:785101..785537 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Heterosigma akashiwo CCMP452 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-akashiwo_Contig108.3.1	mRNA_H-akashiwo_Contig108.3.1	Heterosigma akashiwo CCMP452	mRNA	H-akashiwo_Contig108 785101..785537 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-akashiwo_Contig108.3.1 ID=prot_H-akashiwo_Contig108.3.1|Name=mRNA_H-akashiwo_Contig108.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=90bp
MSERKAVIKNADMAEDMQQDAVDCASQALERYNIEKDIAAFIKKEFDKKY
NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001372	Dynein_light_chain_typ-1/2
IPR037177	DLC_sf
IPR019763	Dynein_light_1/2_CS