prot_H-akashiwo_Contig1056.5.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1056.5.1
Unique Nameprot_H-akashiwo_Contig1056.5.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length165
Homology
BLAST of mRNA_H-akashiwo_Contig1056.5.1 vs. uniprot
Match: A0A6V1P5X7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P5X7_HETAK)

HSP 1 Score: 334 bits (856), Expect = 8.260e-109
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0
Query:    1 MISPLFKSDDPNDTNNYRGISLLSCLGKLFCSIINEFVYTQVESAHLLSDLQGGFRRKRGCREQSFLLLSALLTANRRRGRRAHCAFVDFRKAYDSVKHSVLWKRLDSLGLGPKLTELLRSIYDKVRCTVRKDNQLSDLFPYDIGVRQGCILSPIIFNLFIDELV 165
            MISPLFKSDDPNDTNNYRGISLLSCLGKLFCSIINEFVYTQVESAHLLSDLQGGFRRKRGCREQSFLLLSALLTANRRRGRRAHCAFVDFRKAYDSVKHSVLWKRLDSLGLGPKLTELLRSIYDKVRCTVRKDNQLSDLFPYDIGVRQGCILSPIIFNLFIDELV
Sbjct:   98 MISPLFKSDDPNDTNNYRGISLLSCLGKLFCSIINEFVYTQVESAHLLSDLQGGFRRKRGCREQSFLLLSALLTANRRRGRRAHCAFVDFRKAYDSVKHSVLWKRLDSLGLGPKLTELLRSIYDKVRCTVRKDNQLSDLFPYDIGVRQGCILSPIIFNLFIDELV 262          
BLAST of mRNA_H-akashiwo_Contig1056.5.1 vs. uniprot
Match: A0A6H5JDV1_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDV1_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 2.180e-34
Identity = 61/165 (36.97%), Postives = 102/165 (61.82%), Query Frame = 0
Query:    1 MISPLFKSDDPNDTNNYRGISLLSCLGKLFCSIINEFVYTQVESAHLLSDLQGGFRRKRGCREQSFLLLSALLTANRRRGRRAHCAFVDFRKAYDSVKHSVLWKRLDSLGLGPKLTELLRSIYDKVRCTVRKDNQLSDLFPYDIGVRQGCILSPIIFNLFIDELV 165
            M+  LFK  D  D  NYRGI+LL+ +GK+FC ++N+ +   +E  H +S+ Q GFR+KRGC +  F +   ++   +R G+  +C ++D +KA+ +V  + LWK+L   G+  K+  +L+ + +  +  V  D +LS  F  + GV QGC LSP +F +FI++L+
Sbjct:    1 MVVNLFKEGDKTDPGNYRGITLLNTVGKVFCKLLNDRIVGVLEKEHSISEGQAGFRKKRGCVDHVFTV-GRIIQGRKRAGKSTYCCYLDVKKAFYTVWRNGLWKQLSKYGIKGKMWRVLKKMTECTKSAVMLDGELSKFFDIEQGVPQGCTLSPTLFQVFINDLL 164          
BLAST of mRNA_H-akashiwo_Contig1056.5.1 vs. uniprot
Match: UPI001E1E1F32 (uncharacterized protein LOC123553993 isoform X1 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E1F32)

HSP 1 Score: 137 bits (344), Expect = 2.650e-34
Identity = 64/165 (38.79%), Postives = 107/165 (64.85%), Query Frame = 0
Query:    1 MISPLFKSDDPNDTNNYRGISLLSCLGKLFCSIINEFVYTQVESAHLLSDLQGGFRRKRGCRE-QSFLLLSALLTANRRRGRRAHCAFVDFRKAYDSVKHSVLWKRLDSLGLGPKLTELLRSIYDKVRCTVRKDNQLSDLFPYDIGVRQGCILSPIIFNLFIDEL 164
            +I PLFK +DP+D NNYRGI+L+SC  K+F  ++N+ +   +ES +++SD Q GFR+  GC    +  +L+A+++       R  CAF+DF KA+DS+  + LW +L  LG+      ++R +Y KV+  +R     SD F   +G++QG ++SP++F+LF+++L
Sbjct:  373 IIVPLFKKNDPSDVNNYRGITLVSCFSKIFTGVLNKRISNWIESNNIISDAQFGFRK--GCSTVDAIFVLNAIISKVLSENGRLACAFIDFSKAFDSIYRNGLWYKLHQLGITGNTLRIIRDMYSKVKACIRGCKSYSDFFECSMGLKQGEVISPLLFSLFLEDL 535          
BLAST of mRNA_H-akashiwo_Contig1056.5.1 vs. uniprot
Match: A0A6H5KGV1_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGV1_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 3.760e-34
Identity = 63/165 (38.18%), Postives = 103/165 (62.42%), Query Frame = 0
Query:    1 MISPLFKSDDPNDTNNYRGISLLSCLGKLFCSIINEFVYTQVESAHLLSDLQGGFRRKRGCREQSFLLLSALLTANRRRGRRAHCAFVDFRKAYDSVKHSVLWKRLDSLGLGPKLTELLRSIYDKVRCTVRKDNQLSDLFPYDIGVRQGCILSPIIFNLFIDELV 165
            ++  LFK  D  D  NYRGI+LL+ +GK+FC ++N+ +   +E  H +S+ Q GFR+KRGC +  F +   ++   +R G+  +C F+D +KAYD+V  + LWK+L   G+  K+  +L+ + +  +  V  D +LS  F  + GV QGC LSP +F +FI++L+
Sbjct:  149 VVVNLFKKGDKTDPGNYRGITLLNTVGKVFCKLLNDRIVGVLEKEHSISEGQAGFRKKRGCVDHVFTV-GRIIQGRKRAGKPTYCFFLDVKKAYDTVWRNGLWKQLSKYGIKGKMWRVLKKMTECTKSAVMLDGELSKFFDIEQGVPQGCTLSPTLFQVFINDLL 312          
BLAST of mRNA_H-akashiwo_Contig1056.5.1 vs. uniprot
Match: A0A6H5KP61_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP61_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 7.920e-34
Identity = 61/161 (37.89%), Postives = 101/161 (62.73%), Query Frame = 0
Query:    5 LFKSDDPNDTNNYRGISLLSCLGKLFCSIINEFVYTQVESAHLLSDLQGGFRRKRGCREQSFLLLSALLTANRRRGRRAHCAFVDFRKAYDSVKHSVLWKRLDSLGLGPKLTELLRSIYDKVRCTVRKDNQLSDLFPYDIGVRQGCILSPIIFNLFIDELV 165
            LFK     D  NYRGI+LL+ +GK+FC ++N+ +   +E  H +S+ Q GFR+KRGC +  F + + ++   +R G+  +C F+D +KAYD+V  + LWK+L   G+  K+  +L+ + +  +  V  D +LS  F  + GV QGC +SP +F +FI++L+
Sbjct:   21 LFKKGGNTDPGNYRGITLLNTVGKVFCKLLNDRIVGVLEKEHSISEGQAGFRKKRGCVDHVFTV-ARIIQGRKRAGKPTYCFFLDVKKAYDTVWRNGLWKQLSKYGIKGKMWRVLKKMTECTKSAVMLDGELSKFFDIEQGVPQGCTMSPTLFQVFINDLL 180          
BLAST of mRNA_H-akashiwo_Contig1056.5.1 vs. uniprot
Match: A0A6H5GUJ7_9HEMI (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GUJ7_9HEMI)

HSP 1 Score: 130 bits (327), Expect = 1.250e-33
Identity = 66/159 (41.51%), Postives = 99/159 (62.26%), Query Frame = 0
Query:    5 LFKSDDPNDTNNYRGISLLSCLGKLFCSIINEFVYTQVESAHLLSDLQGGFRRKRGCREQSFLLLSALLTANRRRGRRAHCAFVDFRKAYDSVKHSVLWKRLDSLGLGPKLTELLRSIYDKVRCTVRKDNQLSDLFPYDIGVRQGCILSPIIFNLFIDE 163
            LFK  DP++  NYRGISLL+CL K+F  I+ E +   VES  L+ + Q GFR+ RGC +  F+L S +    R + R+  CAFVDF +A+D+V H VLW +L+ LG+ P+   ++R++Y+    +VR     +  F    G+ QG ILSP++F L + +
Sbjct:   34 LFKKGDPSNVANYRGISLLNCLAKIFTRILYERLVVFVESKSLIPETQNGFRKGRGCADNVFVLSSLVNINTRLKRRKVFCAFVDFFRAFDAVSHPVLWGKLEWLGVSPRFISVIRALYEGASFSVRVGAASTRPFRLSQGILQGDILSPLLFALLLAD 192          
BLAST of mRNA_H-akashiwo_Contig1056.5.1 vs. uniprot
Match: A0A6H5JZU1_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU1_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 1.460e-33
Identity = 61/165 (36.97%), Postives = 101/165 (61.21%), Query Frame = 0
Query:    1 MISPLFKSDDPNDTNNYRGISLLSCLGKLFCSIINEFVYTQVESAHLLSDLQGGFRRKRGCREQSFLLLSALLTANRRRGRRAHCAFVDFRKAYDSVKHSVLWKRLDSLGLGPKLTELLRSIYDKVRCTVRKDNQLSDLFPYDIGVRQGCILSPIIFNLFIDELV 165
            ++  LF   D  D  NYRGI+LL+ +GK+FC ++N+ +   +E  H +S+ Q GFR+KRGC +  F +   ++   +R G+  +C F+D +KAYD+V  + LWK+L   G+  K+  +L+ + +  +  V    +LS  F  + GV QGC LSP +F +FI++L+
Sbjct:    7 VVVNLFTQGDKTDPENYRGITLLNTVGKVFCKLLNDRIVGVLEKEHSISEGQAGFRKKRGCVDHVFTV-GRIIQGRKRAGKPTYCFFLDVKKAYDTVWRNGLWKQLSKYGIKGKMWRVLKKMTECTKSAVMFAGELSACFDIEQGVAQGCTLSPTLFQVFINDLL 170          
BLAST of mRNA_H-akashiwo_Contig1056.5.1 vs. uniprot
Match: A0A6H5JMB0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMB0_9PHAE)

HSP 1 Score: 130 bits (327), Expect = 1.760e-33
Identity = 62/162 (38.27%), Postives = 100/162 (61.73%), Query Frame = 0
Query:    1 MISPLFKSDDPNDTNNYRGISLLSCLGKLFCSIINEFVYTQVESAHLLSDLQGGFRRKRGCREQSFLLLSALLTANRRRGRRAHCAFVDFRKAYDSVKHSVLWKRLDSLGLGPKLTELLRSIYDKVRCTVRKDNQLSDLFPYDIGVRQGCILSPIIFNLFID 162
            ++  LFK  D  D  NYRGI+LL+ +GK+FC ++N+ +   +E  H +S+ Q GFR+KRGC +  F +   ++   +R G+  +C F+D +KAYD+V  + LWK+L   G+  K+  +L+ + +  +  V  D +LS  F  + GV QGC LSP +F +FI+
Sbjct:  197 VVVNLFKKGDKTDPGNYRGITLLNTVGKVFCKLLNDRIVGVLEKEHSISEGQAGFRKKRGCVDHVFTV-GRIIQGRKRAGKPTYCFFLDVKKAYDTVWRNGLWKQLSKYGIKGKMWRVLKKMTECTKSAVMLDGELSKFFDIEQGVPQGCTLSPTLFQVFIN 357          
BLAST of mRNA_H-akashiwo_Contig1056.5.1 vs. uniprot
Match: A0A6H5KYR3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYR3_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 1.920e-33
Identity = 62/165 (37.58%), Postives = 103/165 (62.42%), Query Frame = 0
Query:    1 MISPLFKSDDPNDTNNYRGISLLSCLGKLFCSIINEFVYTQVESAHLLSDLQGGFRRKRGCREQSFLLLSALLTANRRRGRRAHCAFVDFRKAYDSVKHSVLWKRLDSLGLGPKLTELLRSIYDKVRCTVRKDNQLSDLFPYDIGVRQGCILSPIIFNLFIDELV 165
            ++  LFK  D  D  NYRGI+LL+ +GK+FC ++N+ +   +E  H +S+ Q GFR+KRGC +  F +   ++   +R G+  +C F+D +KAYD+V  + LWK+L   G+   +  +L+ + + ++  V  D +LS  F  + GV QGC LSP +F +FI++L+
Sbjct:  208 VVVNLFKKGDKTDPGNYRGITLLNTVGKVFCKLLNDRIVGVLEKEHSISEGQAGFRKKRGCVDHVFTV-GRIIQGRKRAGKPTYCFFLDVKKAYDTVWRNGLWKQLSKYGIKGTMWRVLKKMTECMKSAVMLDGELSKFFDIEQGVPQGCTLSPTLFQVFINDLL 371          
BLAST of mRNA_H-akashiwo_Contig1056.5.1 vs. uniprot
Match: A0A6H5KXP1_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXP1_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 3.180e-33
Identity = 63/161 (39.13%), Postives = 101/161 (62.73%), Query Frame = 0
Query:    5 LFKSDDPNDTNNYRGISLLSCLGKLFCSIINEFVYTQVESAHLLSDLQGGFRRKRGCREQSFLLLSALLTANRRRGRRAHCAFVDFRKAYDSVKHSVLWKRLDSLGLGPKLTELLRSIYDKVRCTVRKDNQLSDLFPYDIGVRQGCILSPIIFNLFIDELV 165
            LFK  D  D  NYRGI+LL+ +GK+FC ++N+ +   +E  H +S+ Q GFR+KRGC +  F +   ++   +R G+  +C F+D RKAY++V  + LWK+L   G+  K+  +L+ + +  +  V  D +LS  F  + GV QGC LSP +F +FI++L+
Sbjct:   37 LFKKGDKTDPGNYRGITLLNTVGKVFCKLLNDRIVGVLEKEHSISEGQAGFRKKRGCVDHVFTV-GRIIQGRKRAGKPTYCFFLDVRKAYNTVWRNGLWKQLSKYGIKGKMWRVLKKMTECTKSAVMLDGELSKFFDIEQGVPQGCTLSPTLFQVFINDLL 196          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1056.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6V1P5X7_HETAK8.260e-109100.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6H5JDV1_9PHAE2.180e-3436.97Reverse transcriptase domain-containing protein n=... [more]
UPI001E1E1F322.650e-3438.79uncharacterized protein LOC123553993 isoform X1 n=... [more]
A0A6H5KGV1_9PHAE3.760e-3438.18Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KP61_9PHAE7.920e-3437.89Reverse transcriptase domain-containing protein n=... [more]
A0A6H5GUJ7_9HEMI1.250e-3341.51Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JZU1_9PHAE1.460e-3336.97Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JMB0_9PHAE1.760e-3338.27Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KYR3_9PHAE1.920e-3337.58Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KXP1_9PHAE3.180e-3339.13Reverse transcriptase domain-containing protein (F... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 14..164
e-value: 2.1E-27
score: 96.1
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..165
score: 11.868471
NoneNo IPR availablePANTHERPTHR47027:SF11SUBFAMILY NOT NAMEDcoord: 4..163
NoneNo IPR availablePANTHERPTHR47027FAMILY NOT NAMEDcoord: 4..163
NoneNo IPR availableCDDcd01650RT_nLTR_likecoord: 2..164
e-value: 5.89973E-36
score: 122.4
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 13..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1056contigH-akashiwo_Contig1056:203312..203806 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1056.5.1mRNA_H-akashiwo_Contig1056.5.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1056 203291..203806 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1056.5.1 ID=prot_H-akashiwo_Contig1056.5.1|Name=mRNA_H-akashiwo_Contig1056.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=165bp
MISPLFKSDDPNDTNNYRGISLLSCLGKLFCSIINEFVYTQVESAHLLSD
LQGGFRRKRGCREQSFLLLSALLTANRRRGRRAHCAFVDFRKAYDSVKHS
VLWKRLDSLGLGPKLTELLRSIYDKVRCTVRKDNQLSDLFPYDIGVRQGC
ILSPIIFNLFIDELV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
IPR043502DNA/RNA_pol_sf