prot_H-akashiwo_Contig1046.5.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1046.5.1
Unique Nameprot_H-akashiwo_Contig1046.5.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length280
Homology
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BLAST of mRNA_H-akashiwo_Contig1046.5.1 vs. uniprot
Match: A0A7S3XVV4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVV4_HETAK)

HSP 1 Score: 333 bits (853), Expect = 2.410e-111
Identity = 197/280 (70.36%), Postives = 209/280 (74.64%), Query Frame = 0 
Query:    1 MVGDGLGQGAGSVSGMFSTFPSSSDLSSQGTNAPASQVQRAPGGAAALTATSNALAGAEDGVAATGPGRPLTKGSSASTSWIANTSFGDLANLGSPEEWENRLKMIPSGSAXXXXXXXXXXXXXXNLKDFXXXXXXXXIPGFPSFKGLGMGDRNTSVDDFFSLVTEGTIPAPQPEVLGMPLIDQVVG-GSRAKQQQAAA-GAGAAAEHPSHGNETKAAPSPGDLAQPENGQNTEQGSLLGKEGDHRDSGPPNKKVKTEEDGAASSPQPHAFETQQVAKEE 278
            MVGDGL  GAGSVSG+FSTFPSSSDL+SQ  NAPASQVQ APGGAA LTATSNAL  AED V A+GPGRPL KG  A TSWIANTSFGDL NLGSPEEWENRLKMIPSGSA              N+K+F        IPGFPS KGLGMGDRNTSVDDFFSLVTEGTIPAPQPEVLGMPLIDQVVG  SR KQ Q A  GAG   EHPSH NETKA  SPGD AQP+NGQN+      GKE +H+     +KKVKTEE G A +P P AFETQQV  +E
Sbjct:   39 MVGDGLSHGAGSVSGLFSTFPSSSDLTSQSNNAPASQVQCAPGGAA-LTATSNALTSAEDSVTASGPGRPLAKGGPAGTSWIANTSFGDLYNLGSPEEWENRLKMIPSGSAEELTKILKKVPSLNNIKEFSSLKRIESIPGFPSLKGLGMGDRNTSVDDFFSLVTEGTIPAPQPEVLGMPLIDQVVGRNSRTKQHQPAEEGAGIVVEHPSHENETKAVRSPGDSAQPDNGQNSR--PPFGKEDEHQXXXXXHKKVKTEE-GTADTPTPQAFETQQVTNQE 314
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1046.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S3XVV4_HETAK2.410e-11170.36Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..279
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 237..258

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1046contigH-akashiwo_Contig1046:208059..208898 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1046.5.1mRNA_H-akashiwo_Contig1046.5.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1046 207952..209120 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1046.5.1 ID=prot_H-akashiwo_Contig1046.5.1|Name=mRNA_H-akashiwo_Contig1046.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=280bp
MVGDGLGQGAGSVSGMFSTFPSSSDLSSQGTNAPASQVQRAPGGAAALTA
TSNALAGAEDGVAATGPGRPLTKGSSASTSWIANTSFGDLANLGSPEEWE
NRLKMIPSGSAEELTKILKKVPSLNNLKDFSSLKRIESIPGFPSFKGLGM
GDRNTSVDDFFSLVTEGTIPAPQPEVLGMPLIDQVVGGSRAKQQQAAAGA
GAAAEHPSHGNETKAAPSPGDLAQPENGQNTEQGSLLGKEGDHRDSGPPN
KKVKTEEDGAASSPQPHAFETQQVAKEEC*
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