prot_H-akashiwo_Contig1030.3.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1030.3.1
Unique Nameprot_H-akashiwo_Contig1030.3.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length52
Homology
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BLAST of mRNA_H-akashiwo_Contig1030.3.1 vs. uniprot
Match: A0A7S3V740_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V740_9STRA)

HSP 1 Score: 49.7 bits (117), Expect = 1.530e-5
Identity = 21/48 (43.75%), Postives = 31/48 (64.58%), Query Frame = 0 
Query:    1 RVALGLSADKDLPRALEVVFRHVRDPARVHFLQAAHPRATPVLGLVNA 48
            R+ +G SADKDL      +  HV+DP R+H ++AAHPRA  +  ++ A
Sbjct:  523 RIVVGFSADKDLQDCGSTLLSHVKDPHRIHLVEAAHPRAAKLEDMLEA 570
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1030.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S3V740_9STRA1.530e-543.75Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1030contigH-akashiwo_Contig1030:227116..227575 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1030.3.1mRNA_H-akashiwo_Contig1030.3.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1030 227116..227577 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1030.3.1 ID=prot_H-akashiwo_Contig1030.3.1|Name=mRNA_H-akashiwo_Contig1030.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=52bp
RVALGLSADKDLPRALEVVFRHVRDPARVHFLQAAHPRATPVLGLVNAAA
EL
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