prot_H-akashiwo_Contig1024.3.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1024.3.1
Unique Nameprot_H-akashiwo_Contig1024.3.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length79
Homology
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BLAST of mRNA_H-akashiwo_Contig1024.3.1 vs. uniprot
Match: A0A7S3XMV6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMV6_HETAK)

HSP 1 Score: 53.9 bits (128), Expect = 1.400e-6
Identity = 28/63 (44.44%), Postives = 40/63 (63.49%), Query Frame = 0 
Query:   15 YAVLAVCSLALSIICCVLLYEYYGECWLNDLLISITCIAGVMITAASLLPRIHVGLLTPSMVF 77
            Y  LA+   A  ++ C  +Y YYG C +N LLI+IT +AG + T ASLL   ++GLL P+ +F
Sbjct:  191 YLFLALAFGAGGVVACGFMYNYYGSCAVNVLLITITLVAGALFTVASLLDSFNLGLLPPASLF 253
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1024.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S3XMV6_HETAK1.400e-644.44Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005016Serine incorporator/TMS membrane proteinPFAMPF03348Serinccoord: 7..76
e-value: 5.8E-7
score: 28.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1024contigH-akashiwo_Contig1024:111844..124630 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1024.3.1mRNA_H-akashiwo_Contig1024.3.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1024 111844..124635 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1024.3.1 ID=prot_H-akashiwo_Contig1024.3.1|Name=mRNA_H-akashiwo_Contig1024.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=79bp
MSSESVTKWCWAPAYAVLAVCSLALSIICCVLLYEYYGECWLNDLLISIT
CIAGVMITAASLLPRIHVGLLTPSMVFV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005016TDE1/TMS