prot_H-akashiwo_Contig1017.8.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1017.8.1
Unique Nameprot_H-akashiwo_Contig1017.8.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length181
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1017.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000626Ubiquitin-like domainSMARTSM00213ubq_7coord: 7..80
e-value: 3.3E-7
score: 39.9
IPR000626Ubiquitin-like domainPFAMPF00240ubiquitincoord: 15..80
e-value: 6.0E-12
score: 45.1
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 5..84
score: 12.901134
NoneNo IPR availableGENE3D3.10.20.90coord: 3..87
e-value: 7.3E-12
score: 46.8
NoneNo IPR availablePANTHERPTHR14557:SF5TRANSMEMBRANE AND UBIQUITIN-LIKE DOMAIN-CONTAINING PROTEIN 1coord: 38..152
IPR040352Transmembrane and ubiquitin-like domain-containing protein 1/2PANTHERPTHR14557PROTEIN C7ORF21coord: 38..152
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 9..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1017contigH-akashiwo_Contig1017:322676..336768 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1017.8.1mRNA_H-akashiwo_Contig1017.8.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1017 322547..336768 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1017.8.1 ID=prot_H-akashiwo_Contig1017.8.1|Name=mRNA_H-akashiwo_Contig1017.8.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=181bp
MGGESDIEVLFRKGEQDFKLKINQNDAVSSVKDNLLSSEHFGSSSGQAVR
LFFKGQELSNERNISTYGIEDGSIIHAVVKANSAASSQAAHQNSTPTGTN
GPLTLENKILIGVVGGGLLAFWVLRFKYDQYFNMLSTLILVFLTGIFGLG
VHDALVPPLSPDSSVSSGSSTSANSHPHAD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin-like_dom
IPR040352TMUB1/2
IPR029071Ubiquitin-like_domsf