prot_H-akashiwo_Contig1008.1.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1008.1.1
Unique Nameprot_H-akashiwo_Contig1008.1.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length253
Homology
BLAST of mRNA_H-akashiwo_Contig1008.1.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK)

HSP 1 Score: 496 bits (1276), Expect = 1.520e-175
Identity = 239/253 (94.47%), Postives = 250/253 (98.81%), Query Frame = 0
Query:    1 LSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFEAKLSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQSNPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDADFCNDRIDGKSVTGYVLFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLVVSKRNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADILTKALNAANF 253
            LSQTSFIKDALAKFGLDYLPACKTP+DHTVDLTPTPGF+A+LSDANLYRSMVGTLAWVANWTRPELAF VHKLQRTQ NPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSD+DFCNDR+DGKSVTGY+LFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLL EMGCPQH+PTPVVEDNSACVEWAND++V+KRNRHFHVSYHLAKEQVSLGTIRMF+IKTHDQVADILTKALNAANF
Sbjct:   88 LSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAANF 340          
BLAST of mRNA_H-akashiwo_Contig1008.1.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK)

HSP 1 Score: 216 bits (549), Expect = 9.850e-61
Identity = 109/254 (42.91%), Postives = 159/254 (62.60%), Query Frame = 0
Query:    1 LSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFEAKLS--DANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQSNPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDADFCNDRIDGKSVTGYVLFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLVVSKRNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADILTKALNAAN 252
            LSQ SFI++A  KF +        P++  +D+        +LS  +A  +RS+VGT+ W+A WT PE+A+++H L +  ++P      A     RYL  T+ + + LGG L L A++DADFC++R  G+S +G+ +FLG +PI+WSS++Q  VT +T EAEY++LR+AV D+MWL+ LL  +G  Q    P+ EDN AC+ WAND  VSK  RH HVSYH  KE V    I + ++ T  Q+AD+ TK L+  N
Sbjct:  733 LSQHSFIEEACEKFQVRSYEPVTNPVNKGIDVNINTDTSRRLSTFEAKKFRSLVGTVNWLALWTFPEVAYSIHTLSKRFTSPSANCLAASYHLLRYLWWTEDKGVTLGGPLNLTAYADADFCSERHKGRSRSGFAIFLGFSPIIWSSRMQHCVTRNTTEAEYVSLRNAVTDVMWLKRLLESLGYKQ-GCVPIYEDNKACITWANDETVSKSARHIHVSYHYTKEMVQSKEIEVKYVDTKHQIADVFTKPLDFNN 985          
BLAST of mRNA_H-akashiwo_Contig1008.1.1 vs. uniprot
Match: A0A7S3Y6S2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6S2_HETAK)

HSP 1 Score: 190 bits (483), Expect = 1.940e-56
Identity = 91/95 (95.79%), Postives = 93/95 (97.89%), Query Frame = 0
Query:    1 LSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFEAKLSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQSNPEPKHFEAVQRAFRYL 95
            LSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGF+A+LSDANLYRSMVGTLAWVANWTRPELAF VHKLQRTQ NPEPKHFEAVQRAFRYL
Sbjct:  174 LSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYL 268          
BLAST of mRNA_H-akashiwo_Contig1008.1.1 vs. uniprot
Match: A0A6A3JMT1_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3JMT1_9STRA)

HSP 1 Score: 174 bits (440), Expect = 1.680e-48
Identity = 97/254 (38.19%), Postives = 143/254 (56.30%), Query Frame = 0
Query:    1 LSQTSFIKDALAKFGLDYLPACKTPIDHTVDLT----PTPGFEAKLSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQSNPEPKHFEAVQRAFRYLKGTQSESLRLGGDLV--LRAFSDADFCNDRIDGKSVTGYVLFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLVVSKRNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADILTKAL 248
            L Q  +I D + +F         TPID ++ +T    P    E  +     +RS++G+L+++A  TRP++A AV +L R   NP  +H++A  +  RYLKGT++  +  GG +   L A+SDAD+ +DR D +SV+G VL L  AP+VW +  Q  V  ST EAEY+AL   VK+ MW R LL  +G  Q   T + EDN   +  A +     R +H  + YH  +E++  G I + +I T +QVAD LTK L
Sbjct:  122 LRQPRYIDDLVQRFNQTEAHPSVTPIDLSLPVTKEDQPETQEEMTIMRGKPFRSIIGSLSYLAGSTRPDIAVAVSRLSRYLENPGIRHWDAAIKIVRYLKGTRNYGVHFGGKMSPELIAYSDADWGSDRDDRRSVSGTVLMLFGAPVVWKTGYQKTVALSTTEAEYMALTMCVKECMWARLLLKNLGLKQEGATTIHEDNQGAIALARNTGYQSRTKHISIRYHYLRERIIAGDIELKYINTKEQVADFLTKGL 375          
BLAST of mRNA_H-akashiwo_Contig1008.1.1 vs. uniprot
Match: A0A6A4DK21_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4DK21_9STRA)

HSP 1 Score: 171 bits (432), Expect = 3.450e-48
Identity = 95/254 (37.40%), Postives = 141/254 (55.51%), Query Frame = 0
Query:    1 LSQTSFIKDALAKFGLDYLPACKTPIDHTVDLT----PTPGFEAKLSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQSNPEPKHFEAVQRAFRYLKGTQSESLRLGGDLV--LRAFSDADFCNDRIDGKSVTGYVLFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLVVSKRNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADILTKAL 248
            L Q  +I D + +F         TPID ++ +T    P    E  +     +RS++G+L+++A  TRP++A AV +L R   NP  +H++A  +  RYLKGT++  +   G +   L A+SDAD+ +DR D +SV+G VL L  AP+VW +  Q  V  ST E EY+AL   VK+ MW R LL  +G  Q   T + EDN   +  A +     R +H  + YH  +E++  G I + +I T +QVAD LTK L
Sbjct:   42 LRQPRYIDDLVQRFNQTEAHPSVTPIDLSLPVTKEDQPETQAEMTIMRGKPFRSIIGSLSYLAGSTRPDIAVAVSRLSRYLENPGIRHWDAAIKIVRYLKGTRNYGVHFDGKMPPELIAYSDADWGSDRDDRRSVSGTVLMLFSAPVVWKTGFQKTVALSTTETEYMALTMCVKECMWARLLLKNLGLKQEGATTIHEDNQGAIALARNTGYQSRTKHISIRYHYLRERIIAGDIELKYINTKEQVADFLTKGL 295          
BLAST of mRNA_H-akashiwo_Contig1008.1.1 vs. uniprot
Match: A0A2N9HCU5_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HCU5_FAGSY)

HSP 1 Score: 180 bits (456), Expect = 5.150e-48
Identity = 98/249 (39.36%), Postives = 139/249 (55.82%), Query Frame = 0
Query:    1 LSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFEAKLSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQSNPEPKHFEAVQRAFRYLKGTQSESLRLGGD--LVLRAFSDADFCNDRIDGKSVTGYVLFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLVVSKRNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADILTKA 247
            LSQ  +  D L+K GL       TP++  V L PT G    LSDA LYR +VG+L ++   TRP+LA+AVH + +  S P   H+ AV R  RY+KGT    L       L LRA++DAD+  D ID +S TGY   LG + I W SK Q  V  S+ EAEY AL  A  +++WLR LL +MG PQ   TP+  DN + +   ++ V  +R +H  +  H  +  +    + +  + + DQ+AD+ TK+
Sbjct:  775 LSQAKYASDLLSKAGLTDSKTVFTPLELNVKLNPTDG--EPLSDATLYRQLVGSLIYLTV-TRPDLAYAVHLVSQFMSAPRSTHYAAVLRILRYIKGTLFHGLHFSAQSSLELRAYADADWAGDPIDRRSTTGYCFLLGSSLISWRSKKQSVVARSSTEAEYRALADATSELLWLRWLLTDMGAPQTTSTPIHCDNRSAIHITHNDVFHERTKHIEIDCHFIRHHLQQSALHLLSVSSEDQLADVFTKS 1020          
BLAST of mRNA_H-akashiwo_Contig1008.1.1 vs. uniprot
Match: A0A8D8ANK3_CULPI (Copia protein n=1 Tax=Culex pipiens TaxID=7175 RepID=A0A8D8ANK3_CULPI)

HSP 1 Score: 171 bits (434), Expect = 2.090e-47
Identity = 98/252 (38.89%), Postives = 142/252 (56.35%), Query Frame = 0
Query:    1 LSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFEAKLSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQSNPEPKHFEAVQRAFRYLKGTQSESLRLGG--DLVLRAFSDADFCNDRIDGKSVTGYVLFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLVVSKRNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADILTKALNA 250
            L Q +FI   + +FG+D     K P+D         G   KL+D   Y S++G+L +++  TRP++A +V  L R  S P    +   +R  RYL  T    L LGG  D  L  +SDAD+  D  D KS +GY+  LG A + W+SK QG V+TST+EAEY+AL  A +D +WLRSLL ++   Q  PT + EDN +C+++A      KR++H    YH  +E     TI++ +  + D +ADILTK L +
Sbjct:  151 LKQQAFINKLVKRFGMDGAKGSKFPMDP--GYFKVSGSSKKLADNQEYHSLIGSLLYLSTHTRPDIAASVGILSRKVSCPSQLDWTEARRILRYLISTADHRLVLGGAEDFKLVGYSDADWAGDSADRKSCSGYLFRLGGATVNWTSKKQGCVSTSTMEAEYVALSQAAQDAVWLRSLLEDINEKQLRPTVIFEDNRSCLDFAALDQQKKRSKHIDTRYHYTRELCLNNTIKLEYCASEDMIADILTKPLGS 400          
BLAST of mRNA_H-akashiwo_Contig1008.1.1 vs. uniprot
Match: A0A8H4R3V9_9AGAR (Uncharacterized protein n=1 Tax=Agrocybe pediades TaxID=84607 RepID=A0A8H4R3V9_9AGAR)

HSP 1 Score: 178 bits (451), Expect = 2.660e-47
Identity = 101/261 (38.70%), Postives = 146/261 (55.94%), Query Frame = 0
Query:    1 LSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFEAKLS-----DANL---YRSMVGTLAWVANWTRPELAFAVHKLQRTQSNPEPKHFEAVQRAFRYLKGTQSESLRLGG--DLV---LRAFSDADFCNDRIDGKSVTGYVLFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLVVSKRNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADILTKAL 248
            LSQT FI   L KFGL       TP+D  V L      + ++S     D  L   Y +++G+L ++A  TRP++A+AVH+L +   NP+PKH+ AV+R FRYLKGT++  L  GG  DL+   L  + DAD+ +   D KS++GY + +    + WSSK Q  V  ST EAEY+A     K ++W RSLL E+  P    + +  DN A +  A       R +H  ++YH  ++ V+ GTI M ++ T   VAD+ TK L
Sbjct: 1140 LSQTHFIDKLLVKFGLQDANPVSTPMDPNVKLDDEDSKDGEVSAEGEQDTRLTYGYATLIGSLMYLALGTRPDIAYAVHRLAQFTQNPKPKHWTAVKRIFRYLKGTRAHKLTFGGLQDLLSNDLNIYCDADWASGA-DRKSISGYAIIIAGGAVAWSSKKQNTVALSTGEAEYVAATHVAKQVLWHRSLLRELNFPLSTTSTIFSDNQAALSIARHPEFHARTKHIDIAYHFLRDLVNDGTITMVYVNTEYNVADVFTKGL 1399          
BLAST of mRNA_H-akashiwo_Contig1008.1.1 vs. uniprot
Match: UPI001035CE32 (uncharacterized protein LOC114320808 n=3 Tax=Camellia sinensis TaxID=4442 RepID=UPI001035CE32)

HSP 1 Score: 170 bits (430), Expect = 5.050e-47
Identity = 99/249 (39.76%), Postives = 137/249 (55.02%), Query Frame = 0
Query:    1 LSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFEAKLSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQSNPEPKHFEAVQRAFRYLKGTQSESLRLGG--DLVLRAFSDADFCNDRIDGKSVTGYVLFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLVVSKRNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADILTKA 247
            LSQ  +  D L + GL       TP++    LTP  G    LSDA LYR +VG+L ++   TRP++A+AVH + +  S P   H+ A+ R  RYLKGT    L       L LRAFSDAD+  D  D +S T +  FLGD+ I W SK Q     S+ EAEY AL    ++++WLR LLA+MG      T +  DN + ++ A++ V   R +H  +  H  ++ V+ GT+    I + DQ ADI TKA
Sbjct:  135 LSQAKYTSDLLTRAGLTDCKTASTPLEPQSRLTPLDG--TLLSDATLYRQLVGSLVYLTV-TRPDIAYAVHIVNQFMSAPRTTHYAALIRIIRYLKGTMFHGLHYSARSSLQLRAFSDADWPGDPTDRRSTTWFCFFLGDSLISWCSKKQSLTARSSTEAEYRALADTTQELLWLRWLLADMGVTSSGATALFCDNHSALQIAHNDVFHDRTKHIEIDCHFIRQHVTHGTVHPHPISSVDQPADIFTKA 380          
BLAST of mRNA_H-akashiwo_Contig1008.1.1 vs. uniprot
Match: A0A2K3MW90_TRIPR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MW90_TRIPR)

HSP 1 Score: 176 bits (445), Expect = 1.620e-46
Identity = 100/255 (39.22%), Postives = 143/255 (56.08%), Query Frame = 0
Query:    1 LSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFEAKLSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQSNPEPKHFEAVQRAFRYLKGTQSESLRLGGD--LVLRAFSDADFCNDRIDGKSVTGYVLFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLVVSKRNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADILTKALNAANF 253
            LSQ  +  D L++ G+       TP++    LTP  G    L DA  YR +VG+L ++   TRP++A+AVHK+ +  + P   HF AV R  RY+KGT    LR   +  LVL  +SDAD+  D  D  S TGY  FLG + I W SK Q  V+ S+ E+EY AL  A  +++WLR LL +MG  Q   T +  DN + ++ +++ V  +R +H  +  HL +  V+ GTIR+  I + DQ ADI TK  +   F
Sbjct:  860 LSQAKYASDLLSRAGITDCKTELTPLEVNCKLTPLDG--TPLEDATRYRQLVGSLVYLTV-TRPDIAYAVHKVSQFMAAPRSSHFSAVLRIIRYVKGTLFHGLRFSANSSLVLSGYSDADWGGDPTDRCSTTGYCFFLGSSLISWRSKKQTVVSRSSTESEYRALADAASELLWLRWLLEDMGVTQSSATTLHCDNKSAIQISHNDVFHERTKHIEIDCHLVRYHVTKGTIRLISIPSVDQTADIFTKTHHPMRF 1111          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1008.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4DD78_HETAK1.520e-17594.47Hypothetical protein n=4 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y1P1_HETAK9.850e-6142.91Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y6S2_HETAK1.940e-5695.79Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A6A3JMT1_9STRA1.680e-4838.19Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A4DK21_9STRA3.450e-4837.40Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2N9HCU5_FAGSY5.150e-4839.36Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8D8ANK3_CULPI2.090e-4738.89Copia protein n=1 Tax=Culex pipiens TaxID=7175 Rep... [more]
A0A8H4R3V9_9AGAR2.660e-4738.70Uncharacterized protein n=1 Tax=Agrocybe pediades ... [more]
UPI001035CE325.050e-4739.76uncharacterized protein LOC114320808 n=3 Tax=Camel... [more]
A0A2K3MW90_TRIPR1.620e-4639.22Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 44..180
NoneNo IPR availablePANTHERPTHR11439:SF268ATP-DEPENDENT DNA HELICASEcoord: 44..180
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 112..250
e-value: 1.77643E-61
score: 188.061

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1008contigH-akashiwo_Contig1008:3802..4560 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1008.1.1mRNA_H-akashiwo_Contig1008.1.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1008 3802..4560 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1008.1.1 ID=prot_H-akashiwo_Contig1008.1.1|Name=mRNA_H-akashiwo_Contig1008.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=253bp
LSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFEAKLSDANLYRS
MVGTLAWVANWTRPELAFAVHKLQRTQSNPEPKHFEAVQRAFRYLKGTQS
ESLRLGGDLVLRAFSDADFCNDRIDGKSVTGYVLFLGDAPIVWSSKLQGA
VTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEW
ANDLVVSKRNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADILTKALNA
ANF
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