prot_H-akashiwo_Contig10.2.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig10.2.1
Unique Nameprot_H-akashiwo_Contig10.2.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length190
Homology
BLAST of mRNA_H-akashiwo_Contig10.2.1 vs. uniprot
Match: A0A6V1P1T2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P1T2_HETAK)

HSP 1 Score: 352 bits (904), Expect = 1.550e-122
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0
Query:    1 MLSLRTIVLVFAAITGLAVAFKAPQQSGAVSRRDVINKVGVSTVGAFIAQTTLVVADDEAPAAPVAPKKEKVDLGPAPDAASYKLKYEYYADAAQMVKNMRYATFMDKSTPDFEKIAISTKKQMIDFISYYRRFPNVSGKMSYSTLYTSVNVLAGHYASYGTKFPVPEKRRKRLAQEYAEIEKNLKKQR 189
            MLSLRTIVLVFAAITGLAVAFKAPQQSGAVSRRDVINKVGVSTVGAFIAQTTLVVADDEAPAAPVAPKKEKVDLGPAPDAASYKLKYEYYADAAQMVKNMRYATFMDKSTPDFEKIAISTKKQMIDFISYYRRFPNVSGKMSYSTLYTSVNVLAGHYASYGTKFPVPEKRRKRLAQEYAEIEKNLKKQR
Sbjct:    1 MLSLRTIVLVFAAITGLAVAFKAPQQSGAVSRRDVINKVGVSTVGAFIAQTTLVVADDEAPAAPVAPKKEKVDLGPAPDAASYKLKYEYYADAAQMVKNMRYATFMDKSTPDFEKIAISTKKQMIDFISYYRRFPNVSGKMSYSTLYTSVNVLAGHYASYGTKFPVPEKRRKRLAQEYAEIEKNLKKQR 189          
BLAST of mRNA_H-akashiwo_Contig10.2.1 vs. uniprot
Match: A0A7S2UVY8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVY8_9STRA)

HSP 1 Score: 166 bits (421), Expect = 1.100e-48
Identity = 93/163 (57.06%), Postives = 117/163 (71.78%), Query Frame = 0
Query:   27 SGAVSRRDVINKVGVSTVGAFIAQTTLVVADDEAPAAPVAPKKEKVDLGPAPDAASYKLKYEYYADAAQMVKNMRYATFMDKSTPDFEKIAISTKKQMIDFISYYRRFPNVSGKMSYSTLYTSVNVLAGHYASYGTKFPVPEKRRKRLAQEYAEIEKNLKKQR 189
            +G VSRRD+I+ +   +V A +  T      +EA A   AP K   D+GP P    +K+K EYY DA  +VKNMRYAT MDK TP+ E+I  S +KQM+DF++ YRR   V+G++SYSTLYTS+NVLAGHYASYG KFPVPEKRRKRL QEY +IEKN++K R
Sbjct:   61 AGPVSRRDLISNIATISV-AGVMTTGAAAFAEEAVAPAAAPAKP--DMGPVP--TDFKVKGEYYPDAILLVKNMRYATLMDKGTPNMEQIGKSVRKQMVDFVAQYRRNNKVNGRLSYSTLYTSINVLAGHYASYGPKFPVPEKRRKRLLQEYNDIEKNMRKNR 218          
BLAST of mRNA_H-akashiwo_Contig10.2.1 vs. uniprot
Match: A0A7S1XRA0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRA0_9STRA)

HSP 1 Score: 164 bits (416), Expect = 4.110e-48
Identity = 102/194 (52.58%), Postives = 130/194 (67.01%), Query Frame = 0
Query:    5 RTIVLVFAAITGLAVAFKAPQ---------QSGAVSRRDVINKVGVSTVGAFIAQTTLVVADDEAPAAPVAPKKEKVDLGPAPDAASYKLKYEYYADAAQMVKNMRYATFMDKSTPDFEKIAISTKKQMIDFISYYRRFPNVSGKMSYSTLYTSVNVLAGHYASYGTKFPVPEKRRKRLAQEYAEIEKNLKKQR 189
            RT+ L  AA+  ++ AF AP+              SRRD I +  VS V   IA   + +AD++A  A         +LGPAP    + L  EYY DA ++V +MRYAT M K TP++E IA S KK+MIDF+S+YRRFPNV+GK S+STLYT++NVLAGHY +YG KFPVPEKR+KRL QEYAEIEKN+K+QR
Sbjct:   24 RTVCL--AALLAVSSAFVAPRTVRSSSQLRMVAGESRRDAIGQSLVS-VATLIAGAQVALADEDAVVAD--------ELGPAP--TDWGLTNEYYKDAPRVVSHMRYATSMPKGTPNYENIAKSCKKEMIDFVSFYRRFPNVAGKPSFSTLYTAINVLAGHYTNYGLKFPVPEKRKKRLFQEYAEIEKNIKRQR 204          
BLAST of mRNA_H-akashiwo_Contig10.2.1 vs. uniprot
Match: A0A7R9U8B8_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8B8_9STRA)

HSP 1 Score: 163 bits (413), Expect = 1.320e-47
Identity = 89/159 (55.97%), Postives = 116/159 (72.96%), Query Frame = 0
Query:   31 SRRDVINKVGVSTVGAFIAQTTLVVADDEAPAAPVAPKKEKVDLGPAPDAASYKLKYEYYADAAQMVKNMRYATFMDKSTPDFEKIAISTKKQMIDFISYYRRFPNVSGKMSYSTLYTSVNVLAGHYASYGTKFPVPEKRRKRLAQEYAEIEKNLKKQR 189
            SRRDV  +  V+ +G+ +A   + VAD+ A  A         +LGP P    + L  +YY DA ++V +MRYAT M KSTP++E IA + KK+MIDF+S+YRRFPNV+GK S+STLYT++NVLAGHY +YG KFPVPEKR+KRL QEYAEIEKN+K+ R
Sbjct:   60 SRRDVAIQ-SVAALGSLLAGAQMAVADEVAAPA-------STELGPPP--TDWGLSNQYYDDAVRVVNHMRYATIMPKSTPNYEAIATNCKKEMIDFVSFYRRFPNVAGKPSFSTLYTAINVLAGHYTNYGVKFPVPEKRKKRLLQEYAEIEKNIKRSR 208          
BLAST of mRNA_H-akashiwo_Contig10.2.1 vs. uniprot
Match: A0A836C8X1_9STRA (Photosystem II Pbs27-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8X1_9STRA)

HSP 1 Score: 157 bits (398), Expect = 1.180e-45
Identity = 93/185 (50.27%), Postives = 122/185 (65.95%), Query Frame = 0
Query:   13 AITGLAVAF--------KAPQQSGAVSRRDVINKVGVSTVGAFIAQTTLVVADDEAPAAPVAPKKEKVDLGPAPDAASYKLKYEYYADAAQMVKNMRYATFMDKSTPDFEKIAISTKKQMIDFISYYRRFPNVSGKMSYSTLYTSVNVLAGHYASYGTKFPVPEKRRKRLAQEYAEIEKNLKKQR 189
            A+ G A AF        K+ Q +   SRR  ++ V  +  GA      L +A D  PA       EKV LGP P    + L  +YY DA+++V +MRYAT M+K   + E +A + +++MIDF+SYYRRFPNVSGK+SYS LYTS+NVLAGHYASYG KFPVPEKRRKRL +EY++I+K +K+QR
Sbjct:   10 ALVGAASAFHSVTMTVPKSAQVAQDFSRRGFLSTVAAA--GAAAVAPALAIAADGTPAV------EKVPLGPMP--VDWGLTKDYYTDASKVVSHMRYATSMEKGAANIENVAKNCRQEMIDFVSYYRRFPNVSGKLSYSNLYTSINVLAGHYASYGPKFPVPEKRRKRLMEEYSQIDKAIKRQR 184          
BLAST of mRNA_H-akashiwo_Contig10.2.1 vs. uniprot
Match: F0YDF6_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDF6_AURAN)

HSP 1 Score: 153 bits (387), Expect = 4.360e-45
Identity = 73/102 (71.57%), Postives = 89/102 (87.25%), Query Frame = 0
Query:   88 EYYADAAQMVKNMRYATFMDKSTPDFEKIAISTKKQMIDFISYYRRFPNVSGKMSYSTLYTSVNVLAGHYASYGTKFPVPEKRRKRLAQEYAEIEKNLKKQR 189
            +YY DA ++V +MR AT +DK  PD EKIA++TKK+MIDF+++YRRF NVSGK S+STLYT++NVLAGHY SYG KFPVPEKRRKRL QEYAEIEKN+KK+R
Sbjct:    1 DYYTDAQKVVAHMRLATSLDKGAPDMEKIALNTKKEMIDFVAFYRRFTNVSGKQSFSTLYTAINVLAGHYTSYGPKFPVPEKRRKRLYQEYAEIEKNIKKRR 102          
BLAST of mRNA_H-akashiwo_Contig10.2.1 vs. uniprot
Match: W7TYA6_9STRA (Photosystem ii 11 kd protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYA6_9STRA)

HSP 1 Score: 153 bits (387), Expect = 6.520e-44
Identity = 75/123 (60.98%), Postives = 97/123 (78.86%), Query Frame = 0
Query:   67 PKKEKVDLGPAPDAASYKLKYEYYADAAQMVKNMRYATFMDKSTPDFEKIAISTKKQMIDFISYYRRFPNVSGKMSYSTLYTSVNVLAGHYASYGTKFPVPEKRRKRLAQEYAEIEKNLKKQR 189
            P    VDLG  P   ++ L  EYY DAAQ+V +M+YATFM++ TP++E IA S K +M DF+SYYRRF NV+GK S+STLYT++NV+AGHYASYG KFP+PEKRRKRL QE+ EI++N+K+ R
Sbjct:   70 PTAAPVDLGVPP--VNFDLSKEYYKDAAQVVNHMKYATFMNRDTPNYENIAKSVKNEMTDFVSYYRRFNNVAGKPSFSTLYTAINVMAGHYASYGPKFPIPEKRRKRLQQEFTEIDRNIKRNR 190          
BLAST of mRNA_H-akashiwo_Contig10.2.1 vs. uniprot
Match: A0A7S3ZPN6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPN6_9STRA)

HSP 1 Score: 151 bits (381), Expect = 9.540e-44
Identity = 79/132 (59.85%), Postives = 100/132 (75.76%), Query Frame = 0
Query:   58 DEAPAAPVAPKKEKVDLGPAPDAASYKLKYEYYADAAQMVKNMRYATFMDKSTPDFEKIAISTKKQMIDFISYYRRFPNVSGKMSYSTLYTSVNVLAGHYASYGTKFPVPEKRRKRLAQEYAEIEKNLKKQR 189
            D+APAAP A   E     P      + +  +YY DAA++V +MR AT ++K  P+ E IA++ KK+MIDF+S+YRRF NVSGK S+STLYT++NVLAGHY SYG KFPVPEKRRKRL QEYAE+EKN+KK+R
Sbjct:    6 DDAPAAPPA---EAEAPAPVEFPKDWGITSDYYTDAAKVVAHMRLATSLEKGAPNMEMIALNCKKEMIDFVSFYRRFTNVSGKQSFSTLYTAINVLAGHYTSYGPKFPVPEKRRKRLFQEYAEVEKNIKKRR 134          
BLAST of mRNA_H-akashiwo_Contig10.2.1 vs. uniprot
Match: A0A836CEQ5_9STRA (Photosystem II Pbs27-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEQ5_9STRA)

HSP 1 Score: 149 bits (375), Expect = 5.050e-42
Identity = 84/175 (48.00%), Postives = 111/175 (63.43%), Query Frame = 0
Query:   15 TGLAVAFKAPQQSGAVSRRDVINKVGVSTVGAFIAQTTLVVADDEAPAAPVAPKKEKVDLGPAPDAASYKLKYEYYADAAQMVKNMRYATFMDKSTPDFEKIAISTKKQMIDFISYYRRFPNVSGKMSYSTLYTSVNVLAGHYASYGTKFPVPEKRRKRLAQEYAEIEKNLKKQR 189
            T    A +   ++  V RR  ++    + +    A      A+D APA        K  LGP P    + L  +YY DA+++V +MRYAT ++K     E  A + +++MIDF+SYYRRFPNVSGK+SYS LYTS+NVLAGHYASYG KFPVPEKRRKRL +EY +IEK +K+QR
Sbjct:   32 TAATSAVRMSSEASDVDRRAFLSSTAAAAMTVASAFVAPAFAEDAAPA--------KAPLGPMP--TDWGLTKDYYTDASKVVSHMRYATSLEKGAAGIEMTAKNCRQEMIDFVSYYRRFPNVSGKLSYSNLYTSINVLAGHYASYGPKFPVPEKRRKRLLEEYNQIEKAIKRQR 196          
BLAST of mRNA_H-akashiwo_Contig10.2.1 vs. uniprot
Match: A0A7S3NKQ6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NKQ6_9STRA)

HSP 1 Score: 146 bits (369), Expect = 2.770e-41
Identity = 79/136 (58.09%), Postives = 102/136 (75.00%), Query Frame = 0
Query:   55 VADDEA-PAAPVAPKKEKVDLGPAPDAASYKLKYEYYADAAQMVKNMRYATFMDKSTPDFEKIAISTKKQMIDFISYYRRFPNVSGKMSYSTLYTSVNVLAGHYASYGTKFPVPEKRRKRLAQEYAEIEKNLKKQR 189
            VADDEA P AP AP   ++         +Y +  +YY DAA++V +MR AT +DK +P+ E+IAI TKK+M  F+++YRRF  V+GK S+STLYT++NVLAGHY SYG KFPVPEKRRKRL QEY EIEKN+K++R
Sbjct:   55 VADDEATPVAPPAPVVAELPT-------NYGITQDYYTDAAKVVAHMRLATSLDKGSPNIEQIAIETKKEMNAFVAFYRRFTTVTGKQSFSTLYTAINVLAGHYTSYGPKFPVPEKRRKRLYQEYDEIEKNIKRKR 183          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig10.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6V1P1T2_HETAK1.550e-122100.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2UVY8_9STRA1.100e-4857.06Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1XRA0_9STRA4.110e-4852.58Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7R9U8B8_9STRA1.320e-4755.97Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A836C8X1_9STRA1.180e-4550.27Photosystem II Pbs27-domain-containing protein n=1... [more]
F0YDF6_AURAN4.360e-4571.57Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
W7TYA6_9STRA6.520e-4460.98Photosystem ii 11 kd protein n=2 Tax=Monodopsidace... [more]
A0A7S3ZPN6_9STRA9.540e-4459.85Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A836CEQ5_9STRA5.050e-4248.00Photosystem II Pbs27-domain-containing protein n=1... [more]
A0A7S3NKQ6_9STRA2.770e-4158.09Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 171..189
NoneNo IPR availablePANTHERPTHR34041:SF1PHOTOSYSTEM II REPAIR PROTEIN PSB27-H1, CHLOROPLASTICcoord: 25..189
IPR025585Photosystem II Pbs27PFAMPF13326PSII_Pbs27coord: 32..185
e-value: 1.5E-28
score: 99.9
IPR025585Photosystem II Pbs27PANTHERPTHR34041PHOTOSYSTEM II REPAIR PROTEIN PSB27-H1, CHLOROPLASTICcoord: 25..189
IPR025585Photosystem II Pbs27HAMAPMF_01481PSII_Psb27coord: 42..185
score: 20.056824
IPR038450Photosystem II Pbs27 superfamilyGENE3D1.20.58.810Photosystem II Pbs27coord: 80..189
e-value: 7.3E-30
score: 105.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig10contigH-akashiwo_Contig10:87143..87712 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig10.2.1mRNA_H-akashiwo_Contig10.2.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig10 87125..88216 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig10.2.1 ID=prot_H-akashiwo_Contig10.2.1|Name=mRNA_H-akashiwo_Contig10.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=190bp
MLSLRTIVLVFAAITGLAVAFKAPQQSGAVSRRDVINKVGVSTVGAFIAQ
TTLVVADDEAPAAPVAPKKEKVDLGPAPDAASYKLKYEYYADAAQMVKNM
RYATFMDKSTPDFEKIAISTKKQMIDFISYYRRFPNVSGKMSYSTLYTSV
NVLAGHYASYGTKFPVPEKRRKRLAQEYAEIEKNLKKQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025585PSII_Pbs27
IPR038450PSII_Pbs27_sf