mRNA_H-akashiwo_Contig10.2.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig10.2.1 vs. uniprot
Match: A0A6V1P1T2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P1T2_HETAK) HSP 1 Score: 355 bits (911), Expect = 1.050e-120 Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 1 Query: 19 MLSLRTIVLVFAAITGLAVAFKAPQQSGAVSRRDVINKVGVSTVGAFIAQTTLVVADDEAPAAPVAPKKEKVDLGPAPDAASYKLKYEYYADAAQMVKNMRYATFMDKSTPDFEKIAISTKKQMIDFISYYRRFPNVSGKMSYSTLYTSVNVLAGHYASYGTKFPVPEKRRKRLAQEYAEIEKNLKKQR 585 MLSLRTIVLVFAAITGLAVAFKAPQQSGAVSRRDVINKVGVSTVGAFIAQTTLVVADDEAPAAPVAPKKEKVDLGPAPDAASYKLKYEYYADAAQMVKNMRYATFMDKSTPDFEKIAISTKKQMIDFISYYRRFPNVSGKMSYSTLYTSVNVLAGHYASYGTKFPVPEKRRKRLAQEYAEIEKNLKKQR Sbjct: 1 MLSLRTIVLVFAAITGLAVAFKAPQQSGAVSRRDVINKVGVSTVGAFIAQTTLVVADDEAPAAPVAPKKEKVDLGPAPDAASYKLKYEYYADAAQMVKNMRYATFMDKSTPDFEKIAISTKKQMIDFISYYRRFPNVSGKMSYSTLYTSVNVLAGHYASYGTKFPVPEKRRKRLAQEYAEIEKNLKKQR 189
BLAST of mRNA_H-akashiwo_Contig10.2.1 vs. uniprot
Match: A0A7S1XRA0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRA0_9STRA) HSP 1 Score: 167 bits (422), Expect = 1.130e-46 Identity = 102/194 (52.58%), Postives = 130/194 (67.01%), Query Frame = 1 Query: 31 RTIVLVFAAITGLAVAFKAPQ---------QSGAVSRRDVINKVGVSTVGAFIAQTTLVVADDEAPAAPVAPKKEKVDLGPAPDAASYKLKYEYYADAAQMVKNMRYATFMDKSTPDFEKIAISTKKQMIDFISYYRRFPNVSGKMSYSTLYTSVNVLAGHYASYGTKFPVPEKRRKRLAQEYAEIEKNLKKQR 585 RT+ L AA+ ++ AF AP+ SRRD I + VS V IA + +AD++A A +LGPAP + L EYY DA ++V +MRYAT M K TP++E IA S KK+MIDF+S+YRRFPNV+GK S+STLYT++NVLAGHY +YG KFPVPEKR+KRL QEYAEIEKN+K+QR Sbjct: 24 RTVCL--AALLAVSSAFVAPRTVRSSSQLRMVAGESRRDAIGQSLVS-VATLIAGAQVALADEDAVVAD--------ELGPAP--TDWGLTNEYYKDAPRVVSHMRYATSMPKGTPNYENIAKSCKKEMIDFVSFYRRFPNVAGKPSFSTLYTAINVLAGHYTNYGLKFPVPEKRKKRLFQEYAEIEKNIKRQR 204
BLAST of mRNA_H-akashiwo_Contig10.2.1 vs. uniprot
Match: A0A7S2UVY8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVY8_9STRA) HSP 1 Score: 167 bits (423), Expect = 1.220e-46 Identity = 93/163 (57.06%), Postives = 117/163 (71.78%), Query Frame = 1 Query: 97 SGAVSRRDVINKVGVSTVGAFIAQTTLVVADDEAPAAPVAPKKEKVDLGPAPDAASYKLKYEYYADAAQMVKNMRYATFMDKSTPDFEKIAISTKKQMIDFISYYRRFPNVSGKMSYSTLYTSVNVLAGHYASYGTKFPVPEKRRKRLAQEYAEIEKNLKKQR 585 +G VSRRD+I+ + +V A + T +EA A AP K D+GP P +K+K EYY DA +VKNMRYAT MDK TP+ E+I S +KQM+DF++ YRR V+G++SYSTLYTS+NVLAGHYASYG KFPVPEKRRKRL QEY +IEKN++K R Sbjct: 61 AGPVSRRDLISNIATISV-AGVMTTGAAAFAEEAVAPAAAPAKP--DMGPVP--TDFKVKGEYYPDAILLVKNMRYATLMDKGTPNMEQIGKSVRKQMVDFVAQYRRNNKVNGRLSYSTLYTSINVLAGHYASYGPKFPVPEKRRKRLLQEYNDIEKNMRKNR 218
BLAST of mRNA_H-akashiwo_Contig10.2.1 vs. uniprot
Match: A0A7R9U8B8_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8B8_9STRA) HSP 1 Score: 164 bits (415), Expect = 1.400e-45 Identity = 89/159 (55.97%), Postives = 116/159 (72.96%), Query Frame = 1 Query: 109 SRRDVINKVGVSTVGAFIAQTTLVVADDEAPAAPVAPKKEKVDLGPAPDAASYKLKYEYYADAAQMVKNMRYATFMDKSTPDFEKIAISTKKQMIDFISYYRRFPNVSGKMSYSTLYTSVNVLAGHYASYGTKFPVPEKRRKRLAQEYAEIEKNLKKQR 585 SRRDV + V+ +G+ +A + VAD+ A A +LGP P + L +YY DA ++V +MRYAT M KSTP++E IA + KK+MIDF+S+YRRFPNV+GK S+STLYT++NVLAGHY +YG KFPVPEKR+KRL QEYAEIEKN+K+ R Sbjct: 60 SRRDVAIQ-SVAALGSLLAGAQMAVADEVAAPA-------STELGPPP--TDWGLSNQYYDDAVRVVNHMRYATIMPKSTPNYEAIATNCKKEMIDFVSFYRRFPNVAGKPSFSTLYTAINVLAGHYTNYGVKFPVPEKRKKRLLQEYAEIEKNIKRSR 208
BLAST of mRNA_H-akashiwo_Contig10.2.1 vs. uniprot
Match: A0A836C8X1_9STRA (Photosystem II Pbs27-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8X1_9STRA) HSP 1 Score: 159 bits (403), Expect = 4.130e-44 Identity = 94/193 (48.70%), Postives = 126/193 (65.28%), Query Frame = 1 Query: 16 KMLSLRTIVLVFAAITGLAVAFKAPQQSGAV---SRRDVINKVGVSTVGAFIAQTTLVVADDEAPAAPVAPKKEKVDLGPAPDAASYKLKYEYYADAAQMVKNMRYATFMDKSTPDFEKIAISTKKQMIDFISYYRRFPNVSGKMSYSTLYTSVNVLAGHYASYGTKFPVPEKRRKRLAQEYAEIEKNLKKQR 585 K ++ T+ LV AA +V P+ + SRR ++ V + GA L +A D PA EKV LGP P + L +YY DA+++V +MRYAT M+K + E +A + +++MIDF+SYYRRFPNVSGK+SYS LYTS+NVLAGHYASYG KFPVPEKRRKRL +EY++I+K +K+QR Sbjct: 2 KSTAVATLALVGAASAFHSVTMTVPKSAQVAQDFSRRGFLSTVAAA--GAAAVAPALAIAADGTPAV------EKVPLGPMP--VDWGLTKDYYTDASKVVSHMRYATSMEKGAANIENVAKNCRQEMIDFVSYYRRFPNVSGKLSYSNLYTSINVLAGHYASYGPKFPVPEKRRKRLMEEYSQIDKAIKRQR 184
BLAST of mRNA_H-akashiwo_Contig10.2.1 vs. uniprot
Match: F0YDF6_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDF6_AURAN) HSP 1 Score: 154 bits (389), Expect = 3.950e-43 Identity = 73/102 (71.57%), Postives = 89/102 (87.25%), Query Frame = 1 Query: 280 EYYADAAQMVKNMRYATFMDKSTPDFEKIAISTKKQMIDFISYYRRFPNVSGKMSYSTLYTSVNVLAGHYASYGTKFPVPEKRRKRLAQEYAEIEKNLKKQR 585 +YY DA ++V +MR AT +DK PD EKIA++TKK+MIDF+++YRRF NVSGK S+STLYT++NVLAGHY SYG KFPVPEKRRKRL QEYAEIEKN+KK+R Sbjct: 1 DYYTDAQKVVAHMRLATSLDKGAPDMEKIALNTKKEMIDFVAFYRRFTNVSGKQSFSTLYTAINVLAGHYTSYGPKFPVPEKRRKRLYQEYAEIEKNIKKRR 102
BLAST of mRNA_H-akashiwo_Contig10.2.1 vs. uniprot
Match: W7TYA6_9STRA (Photosystem ii 11 kd protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYA6_9STRA) HSP 1 Score: 154 bits (389), Expect = 5.930e-42 Identity = 75/123 (60.98%), Postives = 97/123 (78.86%), Query Frame = 1 Query: 217 PKKEKVDLGPAPDAASYKLKYEYYADAAQMVKNMRYATFMDKSTPDFEKIAISTKKQMIDFISYYRRFPNVSGKMSYSTLYTSVNVLAGHYASYGTKFPVPEKRRKRLAQEYAEIEKNLKKQR 585 P VDLG P ++ L EYY DAAQ+V +M+YATFM++ TP++E IA S K +M DF+SYYRRF NV+GK S+STLYT++NV+AGHYASYG KFP+PEKRRKRL QE+ EI++N+K+ R Sbjct: 70 PTAAPVDLGVPP--VNFDLSKEYYKDAAQVVNHMKYATFMNRDTPNYENIAKSVKNEMTDFVSYYRRFNNVAGKPSFSTLYTAINVMAGHYASYGPKFPIPEKRRKRLQQEFTEIDRNIKRNR 190
BLAST of mRNA_H-akashiwo_Contig10.2.1 vs. uniprot
Match: A0A7S3ZPN6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPN6_9STRA) HSP 1 Score: 152 bits (383), Expect = 8.310e-42 Identity = 79/132 (59.85%), Postives = 100/132 (75.76%), Query Frame = 1 Query: 190 DEAPAAPVAPKKEKVDLGPAPDAASYKLKYEYYADAAQMVKNMRYATFMDKSTPDFEKIAISTKKQMIDFISYYRRFPNVSGKMSYSTLYTSVNVLAGHYASYGTKFPVPEKRRKRLAQEYAEIEKNLKKQR 585 D+APAAP A E P + + +YY DAA++V +MR AT ++K P+ E IA++ KK+MIDF+S+YRRF NVSGK S+STLYT++NVLAGHY SYG KFPVPEKRRKRL QEYAE+EKN+KK+R Sbjct: 6 DDAPAAPPA---EAEAPAPVEFPKDWGITSDYYTDAAKVVAHMRLATSLEKGAPNMEMIALNCKKEMIDFVSFYRRFTNVSGKQSFSTLYTAINVLAGHYTSYGPKFPVPEKRRKRLFQEYAEVEKNIKKRR 134
BLAST of mRNA_H-akashiwo_Contig10.2.1 vs. uniprot
Match: A0A836CEQ5_9STRA (Photosystem II Pbs27-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEQ5_9STRA) HSP 1 Score: 149 bits (377), Expect = 4.240e-40 Identity = 84/175 (48.00%), Postives = 111/175 (63.43%), Query Frame = 1 Query: 61 TGLAVAFKAPQQSGAVSRRDVINKVGVSTVGAFIAQTTLVVADDEAPAAPVAPKKEKVDLGPAPDAASYKLKYEYYADAAQMVKNMRYATFMDKSTPDFEKIAISTKKQMIDFISYYRRFPNVSGKMSYSTLYTSVNVLAGHYASYGTKFPVPEKRRKRLAQEYAEIEKNLKKQR 585 T A + ++ V RR ++ + + A A+D APA K LGP P + L +YY DA+++V +MRYAT ++K E A + +++MIDF+SYYRRFPNVSGK+SYS LYTS+NVLAGHYASYG KFPVPEKRRKRL +EY +IEK +K+QR Sbjct: 32 TAATSAVRMSSEASDVDRRAFLSSTAAAAMTVASAFVAPAFAEDAAPA--------KAPLGPMP--TDWGLTKDYYTDASKVVSHMRYATSLEKGAAGIEMTAKNCRQEMIDFVSYYRRFPNVSGKLSYSNLYTSINVLAGHYASYGPKFPVPEKRRKRLLEEYNQIEKAIKRQR 196
BLAST of mRNA_H-akashiwo_Contig10.2.1 vs. uniprot
Match: A0A7S3NKQ6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NKQ6_9STRA) HSP 1 Score: 147 bits (371), Expect = 2.230e-39 Identity = 79/136 (58.09%), Postives = 102/136 (75.00%), Query Frame = 1 Query: 181 VADDEA-PAAPVAPKKEKVDLGPAPDAASYKLKYEYYADAAQMVKNMRYATFMDKSTPDFEKIAISTKKQMIDFISYYRRFPNVSGKMSYSTLYTSVNVLAGHYASYGTKFPVPEKRRKRLAQEYAEIEKNLKKQR 585 VADDEA P AP AP ++ +Y + +YY DAA++V +MR AT +DK +P+ E+IAI TKK+M F+++YRRF V+GK S+STLYT++NVLAGHY SYG KFPVPEKRRKRL QEY EIEKN+K++R Sbjct: 55 VADDEATPVAPPAPVVAELPT-------NYGITQDYYTDAAKVVAHMRLATSLDKGSPNIEQIAIETKKEMNAFVAFYRRFTTVTGKQSFSTLYTAINVLAGHYTSYGPKFPVPEKRRKRLYQEYDEIEKNIKRKR 183 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig10.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig10.2.1 >prot_H-akashiwo_Contig10.2.1 ID=prot_H-akashiwo_Contig10.2.1|Name=mRNA_H-akashiwo_Contig10.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=190bp MLSLRTIVLVFAAITGLAVAFKAPQQSGAVSRRDVINKVGVSTVGAFIAQback to top mRNA from alignment at H-akashiwo_Contig10:87125..88216+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig10.2.1 ID=mRNA_H-akashiwo_Contig10.2.1|Name=mRNA_H-akashiwo_Contig10.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1092bp|location=Sequence derived from alignment at H-akashiwo_Contig10:87125..88216+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig10:87125..88216+ >mRNA_H-akashiwo_Contig10.2.1 ID=mRNA_H-akashiwo_Contig10.2.1|Name=mRNA_H-akashiwo_Contig10.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=570bp|location=Sequence derived from alignment at H-akashiwo_Contig10:87125..88216+ (Heterosigma akashiwo CCMP452)back to top |