prot_H-akashiwo_Contig1.230.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1.230.1
Unique Nameprot_H-akashiwo_Contig1.230.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length153
Homology
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BLAST of mRNA_H-akashiwo_Contig1.230.1 vs. uniprot
Match: A0A7S4D8F8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8F8_HETAK)

HSP 1 Score: 259 bits (661), Expect = 5.770e-82
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0 
Query:    1 LVSARPVEPKDEELLRRLREERAKRALEAEAQELEAEAAEEARVAGELRAEEDAADAAQEGGRNPKVEGTNVHYTFSTGRRPRGMTSRGDFKYEAAGAGEGQVLRAFPGCVLFLPLPFGGXXXXXXXXXTPVASYTLTLELSLDRLPLQGQLG 153
            LVSARPVEPKDEELLRRLREERAKRALEAEAQELEAEAAEEARVAGELRAEEDAADAAQEGGRNPKVEGTNVHYTFSTGRRPRGMTSRGDFKYEAAGAGEGQVLRAFPGCVLFLPLPFGGXXXXXXXXXTPVASYTLTLELSLDRLPLQGQLG
Sbjct:  177 LVSARPVEPKDEELLRRLREERAKRALEAEAQELEAEAAEEARVAGELRAEEDAADAAQEGGRNPKVEGTNVHYTFSTGRRPRGMTSRGDFKYEAAGAGEGQVLRAFPGCVLFLPLPFGGXXXXXXXXXTPVASYTLTLELSLDRLPLQGQLG 329
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BLAST of mRNA_H-akashiwo_Contig1.230.1 vs. uniprot
Match: A0A3P3YPG6_PLABS (Uncharacterized protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YPG6_PLABS)

HSP 1 Score: 65.1 bits (157), Expect = 2.490e-9
Identity = 39/92 (42.39%), Postives = 53/92 (57.61%), Query Frame = 0 
Query:   56 DAAQEGGRNPKVEGTNVHYTFSTGRRPRGMTSRGDFKYEAAGAGEGQVLRAFPGCVLFLPLPFGGXXXXXXXXXTPVASYTLTLELSLDRLP 147
            DAAQ GG NPK+    +++ FSTGRRPRG+TS GD  Y  A       LR      LFLPLPF G           + +Y++T+E+ +++LP
Sbjct: 3902 DAAQAGGHNPKITNEQIYFDFSTGRRPRGVTSLGDIAY--ASDSYSTWLRVLRLGSLFLPLPFPGNGGGAH-----LNTYSMTMEILVEQLP 3986
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1.230.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S4D8F8_HETAK5.770e-82100.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A3P3YPG6_PLABS2.490e-942.39Uncharacterized protein n=2 Tax=Plasmodiophora bra... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 15..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1contigH-akashiwo_Contig1:9383127..9383902 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1.230.1mRNA_H-akashiwo_Contig1.230.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1 9383127..9383904 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1.230.1 ID=prot_H-akashiwo_Contig1.230.1|Name=mRNA_H-akashiwo_Contig1.230.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=153bp
LVSARPVEPKDEELLRRLREERAKRALEAEAQELEAEAAEEARVAGELRA
EEDAADAAQEGGRNPKVEGTNVHYTFSTGRRPRGMTSRGDFKYEAAGAGE
GQVLRAFPGCVLFLPLPFGGAGAGAPRPTTPVASYTLTLELSLDRLPLQG
QLG
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