prot_H-akashiwo_Contig1.106.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1.106.1
Unique Nameprot_H-akashiwo_Contig1.106.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length117
Homology
BLAST of mRNA_H-akashiwo_Contig1.106.1 vs. uniprot
Match: A0A7S3XPS0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPS0_HETAK)

HSP 1 Score: 178 bits (451), Expect = 1.570e-55
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
Query:   24 MAEEKINMEDTKEWILVPESELRFEVDAEKIMTVVLKEGKAEVFGVEMAKNREYRFTATKVAVFTWEGATLATAGEALVAYASEETPMEAYVNT 117
            MAEEKINMEDTKEWILVPESELRFEVDAEKIMTVVLKEGKAEVFGVEMAKNREYRFTATKVAVFTWEGATLATAGEALVAYASEETPMEAYVNT
Sbjct:    1 MAEEKINMEDTKEWILVPESELRFEVDAEKIMTVVLKEGKAEVFGVEMAKNREYRFTATKVAVFTWEGATLATAGEALVAYASEETPMEAYVNT 94          
BLAST of mRNA_H-akashiwo_Contig1.106.1 vs. uniprot
Match: A0A6H5KLD2_9PHAE (Protein CLP1 homolog n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLD2_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 1.610e-20
Identity = 46/85 (54.12%), Postives = 63/85 (74.12%), Query Frame = 0
Query:   33 DTKEWILVPESELRFEVDAEKIMTVVLKEGKAEVFGVEMAKNREYRFTATKVAVFTWEGATLATAGEALVAYASEETPMEAYVNT 117
            +T+ W+L  E+ELRF+V AE  +TVVLKE  AE+FG+E+A   EY+F++TK AVFTW G T+ T G     Y ++ETPM++YVNT
Sbjct:    9 ETRTWVLQAETELRFDVSAEHTLTVVLKENTAEMFGIELAAEYEYKFSSTKAAVFTWYGCTIETTGWVSSIYVAQETPMKSYVNT 93          
BLAST of mRNA_H-akashiwo_Contig1.106.1 vs. uniprot
Match: D8LR58_ECTSI (Protein CLP1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR58_ECTSI)

HSP 1 Score: 94.4 bits (233), Expect = 2.850e-20
Identity = 45/85 (52.94%), Postives = 63/85 (74.12%), Query Frame = 0
Query:   33 DTKEWILVPESELRFEVDAEKIMTVVLKEGKAEVFGVEMAKNREYRFTATKVAVFTWEGATLATAGEALVAYASEETPMEAYVNT 117
            +T+ W+L  E+ELRF+V AE  +TVVL+E  AE+FG+E+A   EY+F++TK AVFTW G T+ T G     Y ++ETPM++YVNT
Sbjct:    9 ETRTWVLQAETELRFDVSAEHTLTVVLRENTAEMFGIELAAEYEYKFSSTKAAVFTWYGCTIETTGWVSSIYVAQETPMKSYVNT 93          
BLAST of mRNA_H-akashiwo_Contig1.106.1 vs. uniprot
Match: A0A023FX20_AMBPA (Putative mrna cleavage and polyadenylation factor ia/ii complex subunit clp1 n=1 Tax=Amblyomma parvum TaxID=251391 RepID=A0A023FX20_AMBPA)

HSP 1 Score: 84.3 bits (207), Expect = 5.940e-18
Identity = 48/95 (50.53%), Postives = 66/95 (69.47%), Query Frame = 0
Query:   24 MAEEKINMEDT-KEWILVPESELRFEVDAEKIMTVVLKEGKAEVFGVEMAKNREYRF-TATKVAVFTWEGATLATAGEALVAYASEETPMEAYVN 116
            M+EEK   E+  +E+ + PESELRFEV+ ++ +T+ LK G AE+FGVE+ KN+++ F    KVAVFTW G TL   G+  VAY ++ETPM  Y N
Sbjct:    1 MSEEKETKEEAAQEFRIDPESELRFEVEGKEKVTIELKSGLAEIFGVELVKNKKFTFGPGAKVAVFTWHGCTLELCGKTEVAYVAKETPMIFYAN 95          
BLAST of mRNA_H-akashiwo_Contig1.106.1 vs. uniprot
Match: A0A835YJV7_9STRA (Protein CLP1 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJV7_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 8.660e-18
Identity = 51/87 (58.62%), Postives = 59/87 (67.82%), Query Frame = 0
Query:   32 EDTKEWILVPESELRFEVDAEKIMTVVLKEGKAEVFGVEMAKNREYRFTA-TKVAVFTWEGATLATAGEALVAYASEETPMEAYVNT 117
            ED K W L  ESELRFEV  +K  TVVL E  AE+FGVE+A N EY F+A  KVAVFTW G  L T   A V Y +++TPM +YVNT
Sbjct:   10 EDKKIWTLEKESELRFEVGPDKSFTVVLLEQSAEIFGVELAVNTEYHFSAGAKVAVFTWYGCKLQTTRTAEVLYVAKDTPMLSYVNT 96          
BLAST of mRNA_H-akashiwo_Contig1.106.1 vs. uniprot
Match: UPI001455D1C3 (polyribonucleotide 5'-hydroxyl-kinase Clp1-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001455D1C3)

HSP 1 Score: 86.7 bits (213), Expect = 1.520e-17
Identity = 47/88 (53.41%), Postives = 64/88 (72.73%), Query Frame = 0
Query:   31 MEDTKEWILVPESELRFEVDAEKIMTVVLKEGKAEVFGVEMAKNREYRFTA-TKVAVFTWEGATLATAGEALVAYASEETPMEAYVNT 117
            ++  KE+ LV ++ELRFEV+  +I+ V LKEG AEVFG E+ KNR Y+FTA +KVAV+TW G  L   G+  VAY +++TPM  Y+NT
Sbjct:   20 LQGMKEYRLVKDTELRFEVEKNEIVHVQLKEGLAEVFGTELLKNRTYKFTALSKVAVYTWHGCCLHLKGKTEVAYIAKDTPMTTYLNT 107          
BLAST of mRNA_H-akashiwo_Contig1.106.1 vs. uniprot
Match: A0A482SJV1_9ARCH (CLP1_N domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SJV1_9ARCH)

HSP 1 Score: 79.7 bits (195), Expect = 5.180e-17
Identity = 41/87 (47.13%), Postives = 56/87 (64.37%), Query Frame = 0
Query:   31 MEDTKEWILVPESELRFEVDAEKIMTVVLKEGKAEVFGVEMAKNREYRFTATKVAVFTWEGATLATAGEALVAYASEETPMEAYVNT 117
            M   +EW+L  E+ELR EV    ++T+ L  G AE+FGVEMA N+EY F    +AVFTW G ++ ++G     Y ++ TPM AYVNT
Sbjct:    1 MSTKREWVLQKETELRCEVSEATVLTLKLTAGNAEIFGVEMALNKEYSFKDQNIAVFTWYGCSIESSGGESGMYIADTTPMVAYVNT 87          
BLAST of mRNA_H-akashiwo_Contig1.106.1 vs. uniprot
Match: A0A4Y7QCM0_9AGAM (mRNA cleavage and polyadenylation factor CLP1 n=1 Tax=Rickenella mellea TaxID=50990 RepID=A0A4Y7QCM0_9AGAM)

HSP 1 Score: 84.0 bits (206), Expect = 1.570e-16
Identity = 42/85 (49.41%), Postives = 57/85 (67.06%), Query Frame = 0
Query:   33 DTKEWILVPESELRFEVDAEKIMTVVLKEGKAEVFGVEMAKNREYRF-TATKVAVFTWEGATLATAGEALVAYASEETPMEAYVN 116
            D+KEWIL PE+E RFE+D    + V L  G AE+FG E+A+ + Y F +  K AVFTW+G T+   G+  V Y S+ETPM+ Y+N
Sbjct:    8 DSKEWILDPETEYRFELDQGTTLAVKLTRGHAEIFGAELAEGKTYLFGSECKAAVFTWQGCTIQVTGQPSVEYVSDETPMDPYIN 92          
BLAST of mRNA_H-akashiwo_Contig1.106.1 vs. uniprot
Match: A0A137P8Y2_CONC2 (mRNA cleavage and polyadenylation factor CLP1 n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137P8Y2_CONC2)

HSP 1 Score: 83.6 bits (205), Expect = 1.900e-16
Identity = 42/87 (48.28%), Postives = 58/87 (66.67%), Query Frame = 0
Query:   30 NMEDTKEWILVPESELRFEVDAEKIMTVVLKEGKAEVFGVEMAKNREYRFTATKVAVFTWEGATLATAGEALVAYASEETPMEAYVN 116
            N  +T+ W L PE ELR E D+E + T+ L +G AE+FG+E+  N EY+F   K+A+FTWEG +L   G   VAY ++ETPM  Y+N
Sbjct:    3 NPSNTQSWDLTPEQELRVEFDSE-VATLKLTKGTAEIFGIELGLNIEYKFQLDKLAIFTWEGCSLEIVGNVGVAYVADETPMSVYLN 88          
BLAST of mRNA_H-akashiwo_Contig1.106.1 vs. uniprot
Match: A0A6P7V440_IXOSC (Protein CLP1 homolog n=16 Tax=Ixodidae TaxID=6939 RepID=A0A6P7V440_IXOSC)

HSP 1 Score: 83.2 bits (204), Expect = 2.530e-16
Identity = 48/95 (50.53%), Postives = 66/95 (69.47%), Query Frame = 0
Query:   24 MAEEKINMEDT-KEWILVPESELRFEVDAEKIMTVVLKEGKAEVFGVEMAKNREYRF-TATKVAVFTWEGATLATAGEALVAYASEETPMEAYVN 116
            M EEK   E+  +E+ + PESELRFEV+ ++ +TV LK G AE+FGVE+ KN+++ F +  K+AVFTW G TL   G+  VAY ++ETPM  Y N
Sbjct:    1 MTEEKEAKEEVAQEFRIDPESELRFEVEGKEKVTVELKSGLAEIFGVELVKNKKFVFGSGAKIAVFTWHGCTLELCGKTEVAYVAKETPMIFYAN 95          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1.106.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3XPS0_HETAK1.570e-55100.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A6H5KLD2_9PHAE1.610e-2054.12Protein CLP1 homolog n=1 Tax=Ectocarpus sp. CCAP 1... [more]
D8LR58_ECTSI2.850e-2052.94Protein CLP1 homolog n=1 Tax=Ectocarpus siliculosu... [more]
A0A023FX20_AMBPA5.940e-1850.53Putative mrna cleavage and polyadenylation factor ... [more]
A0A835YJV7_9STRA8.660e-1858.62Protein CLP1 homolog n=1 Tax=Tribonema minus TaxID... [more]
UPI001455D1C31.520e-1753.41polyribonucleotide 5'-hydroxyl-kinase Clp1-like n=... [more]
A0A482SJV1_9ARCH5.180e-1747.13CLP1_N domain-containing protein n=1 Tax=archaeon ... [more]
A0A4Y7QCM0_9AGAM1.570e-1649.41mRNA cleavage and polyadenylation factor CLP1 n=1 ... [more]
A0A137P8Y2_CONC21.900e-1648.28mRNA cleavage and polyadenylation factor CLP1 n=1 ... [more]
A0A6P7V440_IXOSC2.530e-1650.53Protein CLP1 homolog n=16 Tax=Ixodidae TaxID=6939 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038239Clp1, N-terminal beta-sandwich domain superfamilyGENE3D2.60.120.1030Clp1, DNA binding domaincoord: 26..109
e-value: 1.7E-25
score: 90.7
IPR032324Clp1, N-terminal beta-sandwich domainPFAMPF16573CLP1_Ncoord: 39..117
e-value: 5.2E-25
score: 87.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availablePANTHERPTHR12755:SF6POLYRIBONUCLEOTIDE 5'-HYDROXYL-KINASE CLP1coord: 34..117
IPR045116Polyribonucleotide 5-hydroxyl-kinase Clp1/Grc3PANTHERPTHR12755CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1Pcoord: 34..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1contigH-akashiwo_Contig1:4492832..4493611 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1.106.1mRNA_H-akashiwo_Contig1.106.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1 4492832..4493612 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1.106.1 ID=prot_H-akashiwo_Contig1.106.1|Name=mRNA_H-akashiwo_Contig1.106.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=117bp
KTSQSQRKQRERPTTRPKKHSISMAEEKINMEDTKEWILVPESELRFEVD
AEKIMTVVLKEGKAEVFGVEMAKNREYRFTATKVAVFTWEGATLATAGEA
LVAYASEETPMEAYVNT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038239Clp1_N_sf
IPR032324Clp1_N
IPR045116Clp1/Grc3