prot_H-akashiwo_Contig1.105.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-akashiwo_Contig1.105.1
Unique Name	prot_H-akashiwo_Contig1.105.1
Type	polypeptide
Organism	Heterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length	102

Homology

[Close]

BLAST of mRNA_H-akashiwo_Contig1.105.1 vs. uniprot
Match: A0A7S3XY21_HETAK (DNA gyrase subunit B n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY21_HETAK)

HSP 1 Score: 209 bits (533), Expect = 2.750e-62
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0

Query:    2 MMSSTVGNKAYGADQITVLEGLEPVRKRPGMYIGSTGPKGLHHLVFEVVDNSIDEALAGHCDEILIIIHPDGSLSVQDNGRGIPCEVHPKTGRSALETVLT 102
            MMSSTVGNKAYGADQITVLEGLEPVRKRPGMYIGSTGPKGLHHLVFEVVDNSIDEALAGHCDEILIIIHPDGSLSVQDNGRGIPCEVHPKTGRSALETVLT
Sbjct:    1 MMSSTVGNKAYGADQITVLEGLEPVRKRPGMYIGSTGPKGLHHLVFEVVDNSIDEALAGHCDEILIIIHPDGSLSVQDNGRGIPCEVHPKTGRSALETVLT 101

[Close]

BLAST of mRNA_H-akashiwo_Contig1.105.1 vs. uniprot
Match: A0A383AXX9_9ZZZZ (HATPase_c domain-containing protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A383AXX9_9ZZZZ)

HSP 1 Score: 159 bits (401), Expect = 1.620e-48
Identity = 73/99 (73.74%), Postives = 87/99 (87.88%), Query Frame = 0

Query:    4 SSTVGNKAYGADQITVLEGLEPVRKRPGMYIGSTGPKGLHHLVFEVVDNSIDEALAGHCDEILIIIHPDGSLSVQDNGRGIPCEVHPKTGRSALETVLT 102
            S+ V N+ YGA+QI VLEGLEPVRKRPGMYIGSTGP+GLHHL++EVVDNS+DEALAGHCD I I++  DGS  + DNGRGIP ++HP+TG+SALETVLT
Sbjct:    7 SNKVSNE-YGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLIYEVVDNSVDEALAGHCDHIEIVLKADGSALISDNGRGIPTDIHPRTGKSALETVLT 104

[Close]

BLAST of mRNA_H-akashiwo_Contig1.105.1 vs. uniprot
Match: A0A352JFX6_9CYAN (DNA topoisomerase IV subunit B (Fragment) n=1 Tax=Pseudanabaena sp. TaxID=1153 RepID=A0A352JFX6_9CYAN)

HSP 1 Score: 158 bits (399), Expect = 5.210e-48
Identity = 74/93 (79.57%), Postives = 82/93 (88.17%), Query Frame = 0

Query:   10 KAYGADQITVLEGLEPVRKRPGMYIGSTGPKGLHHLVFEVVDNSIDEALAGHCDEILIIIHPDGSLSVQDNGRGIPCEVHPKTGRSALETVLT 102
            + Y A+QI VLEGLE VRKRPGMYIGSTGPKGLHHLVFEVVDNS+DEALAGHCD IL+ +  DGS+SV DNGRGIP + HPKTG+SALETVLT
Sbjct:    7 ETYNANQIQVLEGLEAVRKRPGMYIGSTGPKGLHHLVFEVVDNSVDEALAGHCDHILVELMSDGSVSVSDNGRGIPTDTHPKTGKSALETVLT 99

[Close]

BLAST of mRNA_H-akashiwo_Contig1.105.1 vs. uniprot
Match: T2RDJ1_PAES9 (Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein n=1 Tax=Paeniclostridium sordellii (strain ATCC 9714 / DSM 2141 / JCM 3814 / LMG 15708 / NCIMB 10717 / 211) TaxID=1292036 RepID=T2RDJ1_PAES9)

HSP 1 Score: 156 bits (395), Expect = 2.120e-47
Identity = 72/91 (79.12%), Postives = 82/91 (90.11%), Query Frame = 0

Query:   12 YGADQITVLEGLEPVRKRPGMYIGSTGPKGLHHLVFEVVDNSIDEALAGHCDEILIIIHPDGSLSVQDNGRGIPCEVHPKTGRSALETVLT 102
            YGA QI VLEGLEPVRKRPGMYIGSTGP+GLHHLV+E+VDNSIDEALAG+C +I + I+ DGS+ V+DNGRGIP EVHPKTG+S LETVLT
Sbjct:    5 YGASQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEIVDNSIDEALAGYCSDIYVSINEDGSIFVRDNGRGIPVEVHPKTGKSTLETVLT 95

[Close]

BLAST of mRNA_H-akashiwo_Contig1.105.1 vs. uniprot
Match: A0A8J8AS25_9FIRM (HATPase_c domain-containing protein (Fragment) n=1 Tax=Proteocatella sp. TaxID=2819256 RepID=A0A8J8AS25_9FIRM)

HSP 1 Score: 156 bits (395), Expect = 2.890e-47
Identity = 72/93 (77.42%), Postives = 81/93 (87.10%), Query Frame = 0

Query:   10 KAYGADQITVLEGLEPVRKRPGMYIGSTGPKGLHHLVFEVVDNSIDEALAGHCDEILIIIHPDGSLSVQDNGRGIPCEVHPKTGRSALETVLT 102
            K YGADQI VLEGLEPVRKRPGMYIGSTGPKGLHHLV+EVVDN+IDEALAGHC  I + I  D S++V D+GRGIP E+HPKTG++ LETVLT
Sbjct:   22 KDYGADQIQVLEGLEPVRKRPGMYIGSTGPKGLHHLVYEVVDNAIDEALAGHCQNIYVAIEKDNSITVTDDGRGIPVEIHPKTGKTTLETVLT 114

[Close]

BLAST of mRNA_H-akashiwo_Contig1.105.1 vs. uniprot
Match: A0A356NCY3_9SYNE (DNA topoisomerase IV subunit B (Fragment) n=1 Tax=Synechococcus sp. UBA8638 TaxID=2055762 RepID=A0A356NCY3_9SYNE)

HSP 1 Score: 156 bits (395), Expect = 3.180e-47
Identity = 71/91 (78.02%), Postives = 82/91 (90.11%), Query Frame = 0

Query:   12 YGADQITVLEGLEPVRKRPGMYIGSTGPKGLHHLVFEVVDNSIDEALAGHCDEILIIIHPDGSLSVQDNGRGIPCEVHPKTGRSALETVLT 102
            YGA QI VLEGLEPVRKRPGMYIGSTGP+GLHHLV+EVVDN++DEALAGHC EI + +H DGS  V+DNGRGIP ++HP+TG+SALETVLT
Sbjct:   11 YGAAQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNAVDEALAGHCTEIHVDLHGDGSAEVRDNGRGIPTDIHPRTGKSALETVLT 101

[Close]

BLAST of mRNA_H-akashiwo_Contig1.105.1 vs. uniprot
Match: A0A6N2EIC5_9CYAN (DNA gyrase subunit B n=12 Tax=Cyanobacteria TaxID=1117 RepID=A0A6N2EIC5_9CYAN)

HSP 1 Score: 169 bits (427), Expect = 3.210e-47
Identity = 78/101 (77.23%), Postives = 88/101 (87.13%), Query Frame = 0

Query:    2 MMSSTVGNKAYGADQITVLEGLEPVRKRPGMYIGSTGPKGLHHLVFEVVDNSIDEALAGHCDEILIIIHPDGSLSVQDNGRGIPCEVHPKTGRSALETVLT 102
            M  +T     YGA+QI VLEGLEPVRKRPGMYIGSTGP+GLHHLV+EVVDNS+DEALAGHCD+IL++IH DGS  V DNGRGIP +VHP+TGRSALETVLT
Sbjct:    1 MSEATKVQNDYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGHCDQILVVIHADGSCGVTDNGRGIPTDVHPRTGRSALETVLT 101

[Close]

BLAST of mRNA_H-akashiwo_Contig1.105.1 vs. uniprot
Match: A0A354B1I0_9CYAN (DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1 Tax=Synechococcales bacterium UBA10510 TaxID=2055795 RepID=A0A354B1I0_9CYAN)

HSP 1 Score: 162 bits (411), Expect = 3.610e-47
Identity = 75/101 (74.26%), Postives = 87/101 (86.14%), Query Frame = 0

Query:    2 MMSSTVGNKAYGADQITVLEGLEPVRKRPGMYIGSTGPKGLHHLVFEVVDNSIDEALAGHCDEILIIIHPDGSLSVQDNGRGIPCEVHPKTGRSALETVLT 102
            M  +T    AYGA+QI VLEGLEPVRKRPGMYIG+TGP+GLHHLV+EVVDNS+DEALAGHCD IL+ ++ DGS  V DNGRGIP ++HP+TGRSALETVLT
Sbjct:    1 MSEATKVEAAYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSVDEALAGHCDRILVALNDDGSCLVTDNGRGIPTDIHPRTGRSALETVLT 101

[Close]

BLAST of mRNA_H-akashiwo_Contig1.105.1 vs. uniprot
Match: K9P9X0_CYAGP (DNA gyrase subunit B n=7 Tax=Cyanobacteria TaxID=1117 RepID=K9P9X0_CYAGP)

HSP 1 Score: 167 bits (424), Expect = 8.330e-47
Identity = 76/92 (82.61%), Postives = 86/92 (93.48%), Query Frame = 0

Query:   11 AYGADQITVLEGLEPVRKRPGMYIGSTGPKGLHHLVFEVVDNSIDEALAGHCDEILIIIHPDGSLSVQDNGRGIPCEVHPKTGRSALETVLT 102
            AYGA+QI VLEGLEPVRKRPGMYIG+TGP+GLHHLV+EVVDNS+DEALAGHCDEIL+ +H DGS SV DNGRGIP ++HP+TGRSALETVLT
Sbjct:   10 AYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSVDEALAGHCDEILVTLHGDGSASVTDNGRGIPTDIHPRTGRSALETVLT 101

[Close]

BLAST of mRNA_H-akashiwo_Contig1.105.1 vs. uniprot
Match: A0A4P7ZTJ9_9SYNE (DNA gyrase subunit B n=5 Tax=Synechococcales TaxID=1890424 RepID=A0A4P7ZTJ9_9SYNE)

HSP 1 Score: 166 bits (421), Expect = 2.250e-46
Identity = 76/101 (75.25%), Postives = 90/101 (89.11%), Query Frame = 0

Query:    2 MMSSTVGNKAYGADQITVLEGLEPVRKRPGMYIGSTGPKGLHHLVFEVVDNSIDEALAGHCDEILIIIHPDGSLSVQDNGRGIPCEVHPKTGRSALETVLT 102
            M  +T    AYGA+QI VLEGLEPVRKRPGMYIGSTGP+GLHHLV+EVVDNS+DEALAGHCD+IL++++ DGS +V DNGRGIP +VHP+TG+SALETVLT
Sbjct:    1 MSEATKVQAAYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGHCDQILVVLNEDGSCAVTDNGRGIPTDVHPRTGKSALETVLT 101

The following BLAST results are available for this feature:

BLAST of mRNA_H-akashiwo_Contig1.105.1 vs. uniprot

BLAST of mRNA_H-akashiwo_Contig1.105.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7S3XY21_HETAK	2.750e-62	100.00	DNA gyrase subunit B n=1 Tax=Heterosigma akashiwo ...	[more]
A0A383AXX9_9ZZZZ	1.620e-48	73.74	HATPase_c domain-containing protein (Fragment) n=1...	[more]
A0A352JFX6_9CYAN	5.210e-48	79.57	DNA topoisomerase IV subunit B (Fragment) n=1 Tax=...	[more]
T2RDJ1_PAES9	2.120e-47	79.12	Histidine kinase-, DNA gyrase B-, and HSP90-like A...	[more]
A0A8J8AS25_9FIRM	2.890e-47	77.42	HATPase_c domain-containing protein (Fragment) n=1...	[more]
A0A356NCY3_9SYNE	3.180e-47	78.02	DNA topoisomerase IV subunit B (Fragment) n=1 Tax=...	[more]
A0A6N2EIC5_9CYAN	3.210e-47	77.23	DNA gyrase subunit B n=12 Tax=Cyanobacteria TaxID=...	[more]
A0A354B1I0_9CYAN	3.610e-47	74.26	DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1...	[more]
K9P9X0_CYAGP	8.330e-47	82.61	DNA gyrase subunit B n=7 Tax=Cyanobacteria TaxID=1...	[more]
A0A4P7ZTJ9_9SYNE	2.250e-46	75.25	DNA gyrase subunit B n=5 Tax=Synechococcales TaxID...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00418	TPI2FAMILY	coord: 76..89 score: 56.62 coord: 41..56 score: 59.45
None	No IPR available	PANTHER	PTHR45866	DNA GYRASE/TOPOISOMERASE SUBUNIT B	coord: 5..102
None	No IPR available	PANTHER	PTHR45866:SF1	DNA GYRASE SUBUNIT B, MITOCHONDRIAL	coord: 5..102
IPR003594	Histidine kinase/HSP90-like ATPase	PFAM	PF02518	HATPase_c	coord: 39..93 e-value: 7.0E-12 score: 45.8
IPR036890	Histidine kinase/HSP90-like ATPase superfamily	GENE3D	3.30.565.10		coord: 9..102 e-value: 2.3E-45 score: 157.2
IPR036890	Histidine kinase/HSP90-like ATPase superfamily	SUPERFAMILY	55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	coord: 12..100

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-akashiwo_Contig1	contig	H-akashiwo_Contig1:4490003..4492075 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Heterosigma akashiwo CCMP452 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-akashiwo_Contig1.105.1	mRNA_H-akashiwo_Contig1.105.1	Heterosigma akashiwo CCMP452	mRNA	H-akashiwo_Contig1 4490003..4492391 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-akashiwo_Contig1.105.1 ID=prot_H-akashiwo_Contig1.105.1|Name=mRNA_H-akashiwo_Contig1.105.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=102bp
MMMSSTVGNKAYGADQITVLEGLEPVRKRPGMYIGSTGPKGLHHLVFEVV
DNSIDEALAGHCDEILIIIHPDGSLSVQDNGRGIPCEVHPKTGRSALETV
LT

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003594	HATPase_C
IPR036890	HATPase_C_sf