mRNA_H-akashiwo_Contig1.105.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1.105.1 vs. uniprot
Match: A0A7S3XY21_HETAK (DNA gyrase subunit B n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY21_HETAK) HSP 1 Score: 209 bits (532), Expect = 9.320e-61 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 2
Query: 245 MMSSTVGNKAYGADQITVLEGLEPVRKRPGMYIGSTGPKGLHHLVFEVVDNSIDEALAGHCDEILIIIHPDGSLSVQDNGRGIPCEVHPKTGRSALETVLT 547
MMSSTVGNKAYGADQITVLEGLEPVRKRPGMYIGSTGPKGLHHLVFEVVDNSIDEALAGHCDEILIIIHPDGSLSVQDNGRGIPCEVHPKTGRSALETVLT
Sbjct: 1 MMSSTVGNKAYGADQITVLEGLEPVRKRPGMYIGSTGPKGLHHLVFEVVDNSIDEALAGHCDEILIIIHPDGSLSVQDNGRGIPCEVHPKTGRSALETVLT 101
BLAST of mRNA_H-akashiwo_Contig1.105.1 vs. uniprot
Match: A0A383AXX9_9ZZZZ (HATPase_c domain-containing protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A383AXX9_9ZZZZ) HSP 1 Score: 158 bits (400), Expect = 4.900e-47 Identity = 73/99 (73.74%), Postives = 87/99 (87.88%), Query Frame = 2
Query: 251 SSTVGNKAYGADQITVLEGLEPVRKRPGMYIGSTGPKGLHHLVFEVVDNSIDEALAGHCDEILIIIHPDGSLSVQDNGRGIPCEVHPKTGRSALETVLT 547
S+ V N+ YGA+QI VLEGLEPVRKRPGMYIGSTGP+GLHHL++EVVDNS+DEALAGHCD I I++ DGS + DNGRGIP ++HP+TG+SALETVLT
Sbjct: 7 SNKVSNE-YGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLIYEVVDNSVDEALAGHCDHIEIVLKADGSALISDNGRGIPTDIHPRTGKSALETVLT 104
BLAST of mRNA_H-akashiwo_Contig1.105.1 vs. uniprot
Match: A0A352JFX6_9CYAN (DNA topoisomerase IV subunit B (Fragment) n=1 Tax=Pseudanabaena sp. TaxID=1153 RepID=A0A352JFX6_9CYAN) HSP 1 Score: 157 bits (398), Expect = 1.580e-46 Identity = 74/93 (79.57%), Postives = 82/93 (88.17%), Query Frame = 2
Query: 269 KAYGADQITVLEGLEPVRKRPGMYIGSTGPKGLHHLVFEVVDNSIDEALAGHCDEILIIIHPDGSLSVQDNGRGIPCEVHPKTGRSALETVLT 547
+ Y A+QI VLEGLE VRKRPGMYIGSTGPKGLHHLVFEVVDNS+DEALAGHCD IL+ + DGS+SV DNGRGIP + HPKTG+SALETVLT
Sbjct: 7 ETYNANQIQVLEGLEAVRKRPGMYIGSTGPKGLHHLVFEVVDNSVDEALAGHCDHILVELMSDGSVSVSDNGRGIPTDTHPKTGKSALETVLT 99
BLAST of mRNA_H-akashiwo_Contig1.105.1 vs. uniprot
Match: T2RDJ1_PAES9 (Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein n=1 Tax=Paeniclostridium sordellii (strain ATCC 9714 / DSM 2141 / JCM 3814 / LMG 15708 / NCIMB 10717 / 211) TaxID=1292036 RepID=T2RDJ1_PAES9) HSP 1 Score: 156 bits (394), Expect = 6.370e-46 Identity = 72/91 (79.12%), Postives = 82/91 (90.11%), Query Frame = 2
Query: 275 YGADQITVLEGLEPVRKRPGMYIGSTGPKGLHHLVFEVVDNSIDEALAGHCDEILIIIHPDGSLSVQDNGRGIPCEVHPKTGRSALETVLT 547
YGA QI VLEGLEPVRKRPGMYIGSTGP+GLHHLV+E+VDNSIDEALAG+C +I + I+ DGS+ V+DNGRGIP EVHPKTG+S LETVLT
Sbjct: 5 YGASQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEIVDNSIDEALAGYCSDIYVSINEDGSIFVRDNGRGIPVEVHPKTGKSTLETVLT 95
BLAST of mRNA_H-akashiwo_Contig1.105.1 vs. uniprot
Match: A0A8J8AS25_9FIRM (HATPase_c domain-containing protein (Fragment) n=1 Tax=Proteocatella sp. TaxID=2819256 RepID=A0A8J8AS25_9FIRM) HSP 1 Score: 156 bits (394), Expect = 8.710e-46 Identity = 72/93 (77.42%), Postives = 81/93 (87.10%), Query Frame = 2
Query: 269 KAYGADQITVLEGLEPVRKRPGMYIGSTGPKGLHHLVFEVVDNSIDEALAGHCDEILIIIHPDGSLSVQDNGRGIPCEVHPKTGRSALETVLT 547
K YGADQI VLEGLEPVRKRPGMYIGSTGPKGLHHLV+EVVDN+IDEALAGHC I + I D S++V D+GRGIP E+HPKTG++ LETVLT
Sbjct: 22 KDYGADQIQVLEGLEPVRKRPGMYIGSTGPKGLHHLVYEVVDNAIDEALAGHCQNIYVAIEKDNSITVTDDGRGIPVEIHPKTGKTTLETVLT 114
BLAST of mRNA_H-akashiwo_Contig1.105.1 vs. uniprot
Match: A0A356NCY3_9SYNE (DNA topoisomerase IV subunit B (Fragment) n=1 Tax=Synechococcus sp. UBA8638 TaxID=2055762 RepID=A0A356NCY3_9SYNE) HSP 1 Score: 156 bits (394), Expect = 9.560e-46 Identity = 71/91 (78.02%), Postives = 82/91 (90.11%), Query Frame = 2
Query: 275 YGADQITVLEGLEPVRKRPGMYIGSTGPKGLHHLVFEVVDNSIDEALAGHCDEILIIIHPDGSLSVQDNGRGIPCEVHPKTGRSALETVLT 547
YGA QI VLEGLEPVRKRPGMYIGSTGP+GLHHLV+EVVDN++DEALAGHC EI + +H DGS V+DNGRGIP ++HP+TG+SALETVLT
Sbjct: 11 YGAAQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNAVDEALAGHCTEIHVDLHGDGSAEVRDNGRGIPTDIHPRTGKSALETVLT 101
BLAST of mRNA_H-akashiwo_Contig1.105.1 vs. uniprot
Match: A0A6N2EIC5_9CYAN (DNA gyrase subunit B n=12 Tax=Cyanobacteria TaxID=1117 RepID=A0A6N2EIC5_9CYAN) HSP 1 Score: 168 bits (426), Expect = 9.870e-46 Identity = 78/101 (77.23%), Postives = 88/101 (87.13%), Query Frame = 2
Query: 245 MMSSTVGNKAYGADQITVLEGLEPVRKRPGMYIGSTGPKGLHHLVFEVVDNSIDEALAGHCDEILIIIHPDGSLSVQDNGRGIPCEVHPKTGRSALETVLT 547
M +T YGA+QI VLEGLEPVRKRPGMYIGSTGP+GLHHLV+EVVDNS+DEALAGHCD+IL++IH DGS V DNGRGIP +VHP+TGRSALETVLT
Sbjct: 1 MSEATKVQNDYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGHCDQILVVIHADGSCGVTDNGRGIPTDVHPRTGRSALETVLT 101
BLAST of mRNA_H-akashiwo_Contig1.105.1 vs. uniprot
Match: A0A354B1I0_9CYAN (DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1 Tax=Synechococcales bacterium UBA10510 TaxID=2055795 RepID=A0A354B1I0_9CYAN) HSP 1 Score: 162 bits (410), Expect = 1.100e-45 Identity = 75/101 (74.26%), Postives = 87/101 (86.14%), Query Frame = 2
Query: 245 MMSSTVGNKAYGADQITVLEGLEPVRKRPGMYIGSTGPKGLHHLVFEVVDNSIDEALAGHCDEILIIIHPDGSLSVQDNGRGIPCEVHPKTGRSALETVLT 547
M +T AYGA+QI VLEGLEPVRKRPGMYIG+TGP+GLHHLV+EVVDNS+DEALAGHCD IL+ ++ DGS V DNGRGIP ++HP+TGRSALETVLT
Sbjct: 1 MSEATKVEAAYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSVDEALAGHCDRILVALNDDGSCLVTDNGRGIPTDIHPRTGRSALETVLT 101
BLAST of mRNA_H-akashiwo_Contig1.105.1 vs. uniprot
Match: K9P9X0_CYAGP (DNA gyrase subunit B n=7 Tax=Cyanobacteria TaxID=1117 RepID=K9P9X0_CYAGP) HSP 1 Score: 167 bits (423), Expect = 2.550e-45 Identity = 76/92 (82.61%), Postives = 86/92 (93.48%), Query Frame = 2
Query: 272 AYGADQITVLEGLEPVRKRPGMYIGSTGPKGLHHLVFEVVDNSIDEALAGHCDEILIIIHPDGSLSVQDNGRGIPCEVHPKTGRSALETVLT 547
AYGA+QI VLEGLEPVRKRPGMYIG+TGP+GLHHLV+EVVDNS+DEALAGHCDEIL+ +H DGS SV DNGRGIP ++HP+TGRSALETVLT
Sbjct: 10 AYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSVDEALAGHCDEILVTLHGDGSASVTDNGRGIPTDIHPRTGRSALETVLT 101
BLAST of mRNA_H-akashiwo_Contig1.105.1 vs. uniprot
Match: A0A4P7ZTJ9_9SYNE (DNA gyrase subunit B n=5 Tax=Synechococcales TaxID=1890424 RepID=A0A4P7ZTJ9_9SYNE) HSP 1 Score: 166 bits (420), Expect = 6.880e-45 Identity = 76/101 (75.25%), Postives = 90/101 (89.11%), Query Frame = 2
Query: 245 MMSSTVGNKAYGADQITVLEGLEPVRKRPGMYIGSTGPKGLHHLVFEVVDNSIDEALAGHCDEILIIIHPDGSLSVQDNGRGIPCEVHPKTGRSALETVLT 547
M +T AYGA+QI VLEGLEPVRKRPGMYIGSTGP+GLHHLV+EVVDNS+DEALAGHCD+IL++++ DGS +V DNGRGIP +VHP+TG+SALETVLT
Sbjct: 1 MSEATKVQAAYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGHCDQILVVLNEDGSCAVTDNGRGIPTDVHPRTGKSALETVLT 101 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1.105.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1.105.1 >prot_H-akashiwo_Contig1.105.1 ID=prot_H-akashiwo_Contig1.105.1|Name=mRNA_H-akashiwo_Contig1.105.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=102bp MMMSSTVGNKAYGADQITVLEGLEPVRKRPGMYIGSTGPKGLHHLVFEVVback to top mRNA from alignment at H-akashiwo_Contig1:4490003..4492391- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1.105.1 ID=mRNA_H-akashiwo_Contig1.105.1|Name=mRNA_H-akashiwo_Contig1.105.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=2389bp|location=Sequence derived from alignment at H-akashiwo_Contig1:4490003..4492391- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1:4490003..4492391- >mRNA_H-akashiwo_Contig1.105.1 ID=mRNA_H-akashiwo_Contig1.105.1|Name=mRNA_H-akashiwo_Contig1.105.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=306bp|location=Sequence derived from alignment at H-akashiwo_Contig1:4490003..4492391- (Heterosigma akashiwo CCMP452)back to top |