mRNA_H-akashiwo_Contig968.3.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig968.3.1 vs. uniprot
Match: A0A8J2PCB9_9HEXA (DNA-directed DNA polymerase n=1 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2PCB9_9HEXA) HSP 1 Score: 95.1 bits (235), Expect = 1.250e-20 Identity = 44/93 (47.31%), Postives = 60/93 (64.52%), Query Frame = 2 Query: 29 NIKLVDSYNFVGSPLASFTKIFSLNPDLAKGYFPHCFARVEHMTYEGPIPSLDWYDADMMKSEARDQFLTWHEEQVEEQVTFNFMDECLRYCS 307 N++++DS+NF+ SPLA F K F L +L KGYFPH F E+ Y G IP+ +Y D MK+EAR FL WH+++ EE F+ E +YCS Sbjct: 928 NLRIIDSHNFIASPLAEFPKTFGLT-ELKKGYFPHLFNTKENENYVGDIPAAHYYCPDQMKAEARKDFLNWHKQKAEEHYQFDMKSELFQYCS 1019
BLAST of mRNA_H-akashiwo_Contig968.3.1 vs. uniprot
Match: UPI0013F2A978 (LOW QUALITY PROTEIN: uncharacterized protein LOC116853627 n=1 Tax=Odontomachus brunneus TaxID=486640 RepID=UPI0013F2A978) HSP 1 Score: 91.7 bits (226), Expect = 1.960e-19 Identity = 40/94 (42.55%), Postives = 56/94 (59.57%), Query Frame = 2 Query: 23 INNIKLVDSYNFVGSPLASFTKIFSLNPDLAKGYFPHCFARVEHMTYEGPIPSLDWYDADMMKSEARDQFLTWHEEQVEEQVTFNFMDECLRYC 304 + K +DS N++ L++ K F L +AKG FP F +E+ Y GP+P +D+Y D MKS+ R+QFLTWH E + FNF E +RYC Sbjct: 137 VGRTKFLDSANYMPMQLSTLPKAFGLKDSVAKGVFPQLFNTIENQNYIGPLPDIDYYSPDTMKSDEREQFLTWHAEMTGKNAVFNFQQEIVRYC 230
BLAST of mRNA_H-akashiwo_Contig968.3.1 vs. uniprot
Match: A0A6J2Y2V4_SITOR (DNA-directed DNA polymerase n=1 Tax=Sitophilus oryzae TaxID=7048 RepID=A0A6J2Y2V4_SITOR) HSP 1 Score: 91.3 bits (225), Expect = 2.720e-19 Identity = 41/95 (43.16%), Postives = 61/95 (64.21%), Query Frame = 2 Query: 20 IINNIKLVDSYNFVGSPLASFTKIFSLNPDLAKGYFPHCFARVEHMTYEGPIPSLDWYDADMMKSEARDQFLTWHEEQVEEQVTFNFMDECLRYC 304 ++ N+K +DS N+ LA K F L +L KGYFPH F V H Y GP+P++++YD D MK+E R++F+ W++E+V E F+F E + YC Sbjct: 241 VVGNVKFLDSLNYFPMALAKLPKAFGLT-ELKKGYFPHLFNTVGHQKYVGPMPAIEYYDPDNMKTEDREKFIKWYQERVAENYMFDFEKEFIEYC 334
BLAST of mRNA_H-akashiwo_Contig968.3.1 vs. uniprot
Match: UPI0013F20DBC (uncharacterized protein LOC116849607 n=1 Tax=Odontomachus brunneus TaxID=486640 RepID=UPI0013F20DBC) HSP 1 Score: 90.9 bits (224), Expect = 3.730e-19 Identity = 40/94 (42.55%), Postives = 56/94 (59.57%), Query Frame = 2 Query: 23 INNIKLVDSYNFVGSPLASFTKIFSLNPDLAKGYFPHCFARVEHMTYEGPIPSLDWYDADMMKSEARDQFLTWHEEQVEEQVTFNFMDECLRYC 304 + K +DS N++ L++ K F L +AKG FPH F +E+ Y P+P +D+Y D MKS+ R+QFLTWH E + FNF E +RYC Sbjct: 291 VGRTKFLDSANYMPMRLSALPKAFGLKDSVAKGVFPHLFNTIENQNYISPLPDIDYYSPDTMKSDEREQFLTWHVEMTGKNAVFNFQREIVRYC 384
BLAST of mRNA_H-akashiwo_Contig968.3.1 vs. uniprot
Match: UPI00193D1A10 (uncharacterized protein LOC120353641 n=1 Tax=Nilaparvata lugens TaxID=108931 RepID=UPI00193D1A10) HSP 1 Score: 90.5 bits (223), Expect = 5.040e-19 Identity = 44/91 (48.35%), Postives = 58/91 (63.74%), Query Frame = 2 Query: 32 IKLVDSYNFVGSPLASFTKIFSLNPDLAKGYFPHCFARVEHMTYEGPIPSLDWYDADMMKSEARDQFLTWHEEQVEEQVTFNFMDECLRYC 304 ++++DS NFV SPL+SF K F L +L KGYFPH F ++ Y GP+P +Y AD MK +AR +FL WH E+V E TF+ E YC Sbjct: 128 LRVIDSVNFVASPLSSFPKTFGLK-ELKKGYFPHYFNTKDNQNYVGPMPDTSFYRADTMKPDARKEFLKWHTERVAEGYTFDMRRELEEYC 217
BLAST of mRNA_H-akashiwo_Contig968.3.1 vs. uniprot
Match: A0A8J9XK52_BRAAE (Hypothetical protein n=1 Tax=Brassicogethes aeneus TaxID=1431903 RepID=A0A8J9XK52_BRAAE) HSP 1 Score: 87.8 bits (216), Expect = 4.560e-18 Identity = 40/93 (43.01%), Postives = 56/93 (60.22%), Query Frame = 2 Query: 26 NNIKLVDSYNFVGSPLASFTKIFSLNPDLAKGYFPHCFARVEHMTYEGPIPSLDWYDADMMKSEARDQFLTWHEEQVEEQVTFNFMDECLRYC 304 N IK +DS N++ PL+ F KGYFPH F + E++ YEGP+P D+Y AD M + +R +F W+ EQV V FNF +E ++YC Sbjct: 638 NKIKFIDSLNYMPLPLSKLPSAFKFEE--VKGYFPHLFNKTENINYEGPMPDADFYMADSMDTVSRTKFFKWYNEQVSNNVLFNFKEELVKYC 728
BLAST of mRNA_H-akashiwo_Contig968.3.1 vs. uniprot
Match: A0A6G0TC89_APHGL (DNA-directed DNA polymerase n=2 Tax=Aphis glycines TaxID=307491 RepID=A0A6G0TC89_APHGL) HSP 1 Score: 85.5 bits (210), Expect = 2.920e-17 Identity = 39/93 (41.94%), Postives = 61/93 (65.59%), Query Frame = 2 Query: 29 NIKLVDSYNFVGSPLASFTKIFSLNPDLAKGYFPHCFARVEHMTYEGPIPSLDWYDADMMKSEARDQFLTWHEEQVEEQVTFNFMDECLRYCS 307 +I+++DS NF+ SPL+SF K F L +L KGYFPH F VE+ Y G +P ++Y + MK+E + +F W+++++ E FNF +E YC+ Sbjct: 644 SIRIIDSSNFIQSPLSSFPKTFGLK-ELKKGYFPHFFNTVENQNYIGILPDKEYYGYETMKTENKQEFEKWYDDKINENYIFNFKEELEAYCN 735
BLAST of mRNA_H-akashiwo_Contig968.3.1 vs. uniprot
Match: D6X3C1_TRICA (DNA-directed DNA polymerase n=1 Tax=Tribolium castaneum TaxID=7070 RepID=D6X3C1_TRICA) HSP 1 Score: 85.5 bits (210), Expect = 2.930e-17 Identity = 40/94 (42.55%), Postives = 58/94 (61.70%), Query Frame = 2 Query: 26 NNIKLVDSYNFVGSPLASFTKIFSLNPDLAKGYFPHCFARVEHMTYEGPIPSLDWYDADMMKSEARDQFLTWHEEQVEEQVTFNFMDECLRYCS 307 NN++++DS NFV PL +F K F L +L KGYFPH F E+ Y G IP +Y + MK + R++FL WH+++ +E F+F E YC+ Sbjct: 478 NNLRIIDSSNFVQGPLKNFPKTFGLK-ELKKGYFPHFFNTTENQNYIGKIPDTKYYGVNSMKPKEREEFLEWHKQKRKENYLFDFKKELYDYCN 570
BLAST of mRNA_H-akashiwo_Contig968.3.1 vs. uniprot
Match: A0A6G0T1J1_APHGL (DNA-directed DNA polymerase (Fragment) n=1 Tax=Aphis glycines TaxID=307491 RepID=A0A6G0T1J1_APHGL) HSP 1 Score: 85.5 bits (210), Expect = 2.940e-17 Identity = 39/93 (41.94%), Postives = 61/93 (65.59%), Query Frame = 2 Query: 29 NIKLVDSYNFVGSPLASFTKIFSLNPDLAKGYFPHCFARVEHMTYEGPIPSLDWYDADMMKSEARDQFLTWHEEQVEEQVTFNFMDECLRYCS 307 +I+++DS NF+ SPL+SF K F L +L KGYFPH F VE+ Y G +P ++Y + MK+E + +F W+++++ E FNF +E YC+ Sbjct: 630 SIRIIDSSNFIQSPLSSFPKTFGLK-ELKKGYFPHFFNTVENQNYIGILPDKEYYGYETMKTENKQEFEKWYDDKINENYIFNFKEELEAYCN 721
BLAST of mRNA_H-akashiwo_Contig968.3.1 vs. uniprot
Match: A0A8J9TA42_BRAAE (Hypothetical protein n=1 Tax=Brassicogethes aeneus TaxID=1431903 RepID=A0A8J9TA42_BRAAE) HSP 1 Score: 79.3 bits (194), Expect = 4.430e-17 Identity = 37/93 (39.78%), Postives = 60/93 (64.52%), Query Frame = 2 Query: 23 INNIKLVDSYNFVGSPLASFTKIFSLNPDLAKGYFPHCFARVEHMTYEGPIPSLDWYDADMMKSEARDQFLTWHEEQVEEQVTFNFMDECLRY 301 + N+K +DS N+ L++ +K F L+ KGYFPH F E+ TY GP+PS+ +Y+ D++K +AR++FL W+EE ++ F+F E + Y Sbjct: 3 LGNVKFLDSLNYFPMALSALSKAFGLDDKFKKGYFPHLFNTWENQTYIGPMPSIKYYNPDIIKEDARNKFLKWYEEHKYDK--FDFQKEFIDY 93 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig968.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig968.3.1 >prot_H-akashiwo_Contig968.3.1 ID=prot_H-akashiwo_Contig968.3.1|Name=mRNA_H-akashiwo_Contig968.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=100bp MTATIINNIKLVDSYNFVGSPLASFTKIFSLNPDLAKGYFPHCFARVEHMback to top mRNA from alignment at H-akashiwo_Contig968:362687..362993+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig968.3.1 ID=mRNA_H-akashiwo_Contig968.3.1|Name=mRNA_H-akashiwo_Contig968.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=307bp|location=Sequence derived from alignment at H-akashiwo_Contig968:362687..362993+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig968:362687..362993+ >mRNA_H-akashiwo_Contig968.3.1 ID=mRNA_H-akashiwo_Contig968.3.1|Name=mRNA_H-akashiwo_Contig968.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=300bp|location=Sequence derived from alignment at H-akashiwo_Contig968:362687..362993+ (Heterosigma akashiwo CCMP452)back to top |