mRNA_H-akashiwo_Contig966.10.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig966.10.1 vs. uniprot
Match: A0A7S3UWB4_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWB4_HETAK) HSP 1 Score: 194 bits (494), Expect = 4.500e-54 Identity = 104/272 (38.24%), Postives = 146/272 (53.68%), Query Frame = 1 Query: 4 LVNMLCGTACPGSICKPCAKQHFSFIVKTGYDGLCRRMHCPACPHRNVPQERWALLVDEETLELFKQRASKLLSFQCAGCHTRKNLFVEPSPVQAELAPAKISQLFMVKRMYFTNETWALIQDLLKSYIENEVSADGLFKLF-MELWPFLFNCECT-RCSWTFFLEPLLQGIQDYERNANLHLRYLRQFPNTVTTCCNREHCWVCRT-TWDNHQGLTCEEHQAQLVAQGGPGYGQIISCPSCGIQLMKGDGCDSITCVCGHQFRFTDARQQE 810 ++ LCG CP CK CA HF IV YDG+ R+M CP+C VP WA D E L LF++RA+ LLS QCAGCHTRK+LF++ + + + ++ M +E L + ++ + F+L + L+P F W ++P+L I+D + A LHLRYLR FP T CC R C+ CRT W H+G TC + A ++++CP+C IQL+KGDGC S+TCVCG F + D R++E Sbjct: 81 ILKELCGPKCPLVACKSCASSHFEGIVSESYDGILRKMTCPSCISMEVPSSTWANFTDPEMLALFQRRAAILLSLQCAGCHTRKDLFIQDQSLPTDAD----KHMEGIETMLVASEKRDAFSQALGLFTSGSINEEDFFQLICITLFPDQFQSSSPDEGPWEDVMKPILLSIRDARQRAVLHLRYLRSFPKCSTPCCKRVQCFRCRTGQW--HEGQTCSQVLAAQFQNS-----EVLTCPACAIQLVKGDGCSSVTCVCGKTFNW-DQRKKE 340
BLAST of mRNA_H-akashiwo_Contig966.10.1 vs. uniprot
Match: A0A7S4D641_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D641_HETAK) HSP 1 Score: 177 bits (448), Expect = 1.950e-49 Identity = 99/265 (37.36%), Postives = 145/265 (54.72%), Query Frame = 1 Query: 19 CGTACPGSICKPCAKQHFSFIVKTGYDGLCRRMHCPACPHRNVPQERWALLVDEETLELFKQRASKLLSFQCAGCHTRKNLFVEPSPVQAELAPAKISQLFMVKRMYFTNETWALIQDLLKSYIENEVSADGLF---KLFMELWPFLFNCECTRCSWTFFLEPLLQGIQDYERNANLHLRYLRQFPNTVTTCCNREHCWVCRTTWDNHQGLTCEEHQAQLVAQGGPGYGQIISCPSCGIQLMKGDGCDSITCVCGHQFRFTDARQ 804 CG+ CP CK C +HF + +GYDG+ R+M CPAC R+VP W + L+ +RA+ LL+ QC+GCH RK + P + ++ P M K A+ ++LL +E E DG +L+ + + F+ E W ++P+LQ I+D A L+LRYLR +P T CC E C+ CRT D H G+TCEE + +L A+ +++CP C IQL+KGDGC+ +TCVCGH F + + R+ Sbjct: 97 CGSDCPLKACKECIAKHFKDTISSGYDGILRKMTCPACVKRSVPVSLWGPVCSSNQTTLYSRRAAILLTLQCSGCHERKTIL--PDEDENQVLPTD----GMPK---------AVKEELL---MEFERFNDGKINDQELYERISTYFFSFENLPNPWL-VMQPILQKIRDEGFRAELYLRYLRHYPKVSTICCEAEQCFRCRTE-DWHDGMTCEEMRKELEAE--QLSDDVLNCPECDIQLVKGDGCEWVTCVCGHGFDWEELRR 339
BLAST of mRNA_H-akashiwo_Contig966.10.1 vs. uniprot
Match: A0A7S4DEH3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DEH3_HETAK) HSP 1 Score: 182 bits (463), Expect = 1.060e-48 Identity = 102/264 (38.64%), Postives = 144/264 (54.55%), Query Frame = 1 Query: 16 LCGTACPGSICKPCAKQHFSFIVKTGYDGLCRRMHCPACPHRNVPQERWALLVDEETLELFKQRASKLLSFQCAGCHTRKNLFVE----PSPVQAELAPAKISQLFMVKRMYFTNETWALIQDLLKSYIENEVSADGLFK-LFMELWPFLFNC--ECTRCSWTFFLEPLLQGIQDYERNANLHLRYLRQFPNTVTTCCNREHCWVCRT-TWDNHQGLTCEEHQAQLVAQGGPGYGQIISCPSCGIQLMKGDGCDSITCVCGHQF 783 +CG CP + C C K HF IVK GYDG+ ++M CP C VP + W+ VD TLELF++RA+ LLS QC+GCH+RK+LF+ PS + L K + +++ + ++ + L L ++ E + D F+ L +P F + W P+L ++D A LHLRYLR+ P T CC C+ CRT W H G TC E VA + +++C SCG+QL+KGDGC S+TCVCG+ F Sbjct: 85 ICGPDCPLTSCTACLKTHFESIVKQGYDGILKKMTCPGCISMTVPSDAWSPFVDASTLELFQRRAAILLSLQCSGCHSRKDLFIPETELPSNPEQHL---KNTLKPLLENEHAGDQEYRLA---LGRFVRGEDNEDAFFQQLRTRFFPGKFAAAEDPDAGPWAAAARPVLLSVRDARARAVLHLRYLREHPKVTTGCCQATQCFRCRTGRW--HAGQTCAE-----VAAASYQHSDLLTCASCGLQLVKGDGCSSVTCVCGNHF 335
BLAST of mRNA_H-akashiwo_Contig966.10.1 vs. uniprot
Match: A0A7S3XSF2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSF2_HETAK) HSP 1 Score: 168 bits (425), Expect = 1.110e-46 Identity = 95/256 (37.11%), Postives = 140/256 (54.69%), Query Frame = 1 Query: 46 CKPCAKQHFSFIVKTGYDGLCRRMHCPACPHRNVPQERWALLVDEETLELFKQRASKLLSFQCAGCHTRKNLFVEPSPVQAELAPAKISQLFMVKRMYFTNETWALIQDLLKSYIENEVSADGLF---KLFMELWPFLFNCECTRCSWTFFLEPLLQGIQDYERNANLHLRYLRQFPNTVTTCCNREHCWVCRTTWDNHQGLTCEEHQAQLVAQGGPGYGQIISCPSCGIQLMKGDGCDSITCVCGHQFRFTDARQ 804 CK C +HF + +GYDG+ R+M CPAC R+VP W + L+ +RA+ LL+ QC+GCH RK + P + ++ P M K A+ ++LL +E E DG +L+ + + F+ E W ++P+LQ I+D A L+LRYLR +P T CC E C+ CRT D H G+TCEE + +L A+ +++CP C IQL+KGDGC+ +TCVCGH F + + R+ Sbjct: 43 CKECIAKHFKDTISSGYDGILRKMTCPACVKRSVPVSLWGPVCSSNQTTLYSRRAAILLTLQCSGCHERKTIL--PDEDENQVLPTD----GMPK---------AVKEELL---MEFERFNDGKINDQELYERISTYFFSFENLPNPWL-VMQPILQKIRDEGFRAELYLRYLRHYPKVSTICCEAEQCFRCRTE-DWHDGMTCEEMRKELEAE--QLSDDVLNCPECDIQLVKGDGCEWVTCVCGHGFDWEELRR 276
BLAST of mRNA_H-akashiwo_Contig966.10.1 vs. uniprot
Match: A0A835YLL2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLL2_9STRA) HSP 1 Score: 153 bits (386), Expect = 1.840e-39 Identity = 100/261 (38.31%), Postives = 137/261 (52.49%), Query Frame = 1 Query: 46 CKPCAKQHFSFIVKTGYDGLCRRMHCPACPHRNVPQERWALLVDEETLELFKQRASKLLSFQCAGCHTRKNL--FVEPSPVQAELAPAKISQLFMVKRMYFTNETWALIQDLLKSYIENEVSADGL--FKLFMELWPFLFNC--ECTRCSWTFFLEPLLQGIQDYERNANLHLRYLRQFPNTVTTCCNREHCWVCRTTWDNHQGLTCEEHQAQLVAQGGPGYGQIISCPSCGIQLMKGDGCDSITCVCGHQFRFTDARQQE 810 C+ C ++F+ IV GY+G+C RM CP CP VP+ RW+ LV+ ET LF+QRA+ LL+ QC+ CHTR +L F S A+ A L ++ E A+ + I V D + E P L + E T W E +L+ IQD+ER A LH R+L P T CC HC+ CR +H G TC E+QA P + +CP+C I ++K DGC S++CVCGH F F ++R QE Sbjct: 122 CEGCLAKYFTAIVAEGYNGVCPRMKCPFCP-LVVPEMRWSALVEPETSRLFRQRAAILLTLQCSSCHTRCSLMEFAHYSAGSADFERALPGALAADLHLF---EAGAISATVFVERIAAAVDGDIAQPCAVTAEQDPELNHVVPETTAKVWALMRE-VLKCIQDWERRAVLHSRFLSLHPVVQTPCCMAVHCYRCRVGHVHH-GQTCAEYQAATY----PSEELVATCPNCSIYIVKNDGCSSVSCVCGHGFCF-ESRLQE 371
BLAST of mRNA_H-akashiwo_Contig966.10.1 vs. uniprot
Match: D7G6K5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6K5_ECTSI) HSP 1 Score: 153 bits (386), Expect = 2.330e-38 Identity = 96/298 (32.21%), Postives = 142/298 (47.65%), Query Frame = 1 Query: 22 GTACPGSICKPCAKQHFSFIVKTGYDGLCRRMHCPACPHRNVPQERWALLVDEETLELFKQRASKLLSFQCAGCHTRKNLFVEP------------------------SPVQAELAPAKISQLFMVKRMYFTN-------------ETWALIQDLLKSYIENEVSADGLFKLFMELWPFLFNC---ECTRCSWTFFLEPLLQGIQDYERNANLHLRYLRQFPNTVTTCCNREHCWVCRTTWDNHQGLTCEEHQAQLVAQGGPGYGQIISCPSCGIQLMKGDGCDSITCVCGHQFRFTD 795 GT C + C C K +F+ IV+ G+DG C RM C CP R V + WA LV+ LE F++RA+ LLS QC CH+R + V+P +P A A A +Q TN + + + L+ YI L + +E + N + + S + L+ ++D ER ANLH+R++R P VT CC HC+ CR +H TCE+++A G G+ + CP CG+ ++KGDGCDSI+C+CGH F +++ Sbjct: 91 GTDCTVTACVSCLKTYFTGIVEAGFDGACPRMRCMCCP-RVVCEWVWAPLVEATVLETFQKRAATLLSIQCGMCHSRGTIMVKPPADHCYSSALDKLMAMIASGLAPATPPSATTATAITTQGSPANIKSSTNGGDNSVASSTCNAQRLEIFRASLERYISGHEIDPSLCYIALE--AAIANPGIGQAAQESRDELMVLLMSCVEDSERRANLHIRFIRSNPMVVTQCCKSLHCYPCRVVGGHHP-QTCEQYEA------GRGHQDVCKCPGCGVYVVKGDGCDSISCICGHDFSWSE 378
BLAST of mRNA_H-akashiwo_Contig966.10.1 vs. uniprot
Match: A0A482RY51_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RY51_9ARCH) HSP 1 Score: 136 bits (342), Expect = 4.010e-33 Identity = 87/254 (34.25%), Postives = 126/254 (49.61%), Query Frame = 1 Query: 82 VKTGYDGLCRRMHCPACPH------RNVPQERWALLVDEETLELFKQRASKLLSFQCAGCHTRKNLFVEPSPVQAELAPAKISQLFMVKRMYFTNETWALIQDLLKSYIENEVSAD----GLFKLFMELWPFLFNCECTRCSWTFFLEPLLQGIQDYERNANLHLRYLRQFPNTVTTCCNREHCWVCRTTWDNHQGLTCEEHQAQLVAQGGPGYGQIISCPSCGIQLMKGDGCDSITCVCGHQFRFTDARQQEE 813 +++ Y G C +HCP+ H R +P +W + E + A+ LL+F C GCH+ K+L + ++ + QL N A ++ ++SY + D L K F L + E +W F + LL+ I D ER ANLHLRYLR P T CC+REHC+ C+ D H+G TC E+ L I+ CPSCGI L KGDGC+++TCVCG QF ++ ++ E Sbjct: 5 IQSAYMGTCPIIHCPSTMHHKSKKRRVIPYTKWKEALPAEISTKYNSLANSLLAFLCGGCHSLKSLDLGH---ESNRSANCYQQLARNLSDSAGNCKMAALETAVESYCLGGILVDEFYEDLLKSFFTRLTSLNDAE----AWEQFSD-LLRIIPDPERRANLHLRYLRDRPRIKTLCCSREHCFRCKIK-DFHEGKTCMENTESLDHS-------IVCCPSCGIALAKGDGCNTVTCVCGKQFSWSSEKENTE 242
BLAST of mRNA_H-akashiwo_Contig966.10.1 vs. uniprot
Match: A0A7S2SQB9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQB9_9STRA) HSP 1 Score: 137 bits (345), Expect = 6.750e-33 Identity = 90/285 (31.58%), Postives = 120/285 (42.11%), Query Frame = 1 Query: 4 LVNMLCGTACPGSICKPCAKQHFSFIVKTGYDGLCRRMHCPACPHRNVPQERWALLVDEET--------LELFKQRASKLLSFQCAGCHTRKNLFVEPSPVQAELAPAKISQLFMVKRMYFTNETWALIQD-LLKSYIE----NEVSADGLFKLFMELWPFLFNCECTRCSWTFFLEP----------LLQGIQDYERNANLHLRYLRQFPNTVTTCCNREHCWVCRTTWDNHQGLTCEEHQAQLVAQGGPGYGQIISCPSCGIQLMKGDGCDSITCVCGHQFRF 789 LV CG C +C C +H V +GY G RMHCP P R RW V E ++ F A +LS QC CH R++L S A+ K M + A + D L K ++E VS + + + CE F L LL I+D ER A LH +LR+FP ++ CC HC+ C + H TCEE QA ++ CP CG+QL KGDGC S++CVCG+ F + Sbjct: 39 LVGGFCGPDCQTIMCSSCLAEHCRVTVDSGYPGAAIRMHCPIHPKRIAAAGRWQPAVMEHLGQADGKALIDRFTSHARGILSLQCGSCHARRDLMRPTSKALAD------------KAMQALQASHAPVYDHLYKQHVEPFLVGAVSQEHV----------IVQCEAFLPKPEFALTHPSGKDTAFGLLLDSIEDDERKATLHYAFLRRFPKCISNCCKSVHCFRCHIS-GFHTNKTCEEFQASRTT-----VEDVVPCPGCGVQLTKGDGCSSVSCVCGNSFNW 295
BLAST of mRNA_H-akashiwo_Contig966.10.1 vs. uniprot
Match: A0A7S1XW06_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XW06_9STRA) HSP 1 Score: 130 bits (327), Expect = 3.450e-31 Identity = 84/259 (32.43%), Postives = 125/259 (48.26%), Query Frame = 1 Query: 46 CKPCAKQHFSFIVKTGYDGLCRRMHCPACPHRNVPQERWALLV--DEETLELFKQRASKLLSFQCAGCHTRKNLFVEPSPVQAELAPAKISQLFMVKRMYFTNETWALIQDLLKSYIENEVSADGLFKLFMELWPFLFNCECTRCSWTFFLEP-------LLQGIQDYERNANLHLRYLRQFPNTVTTCCNREHCWVCRT-TWDNHQGLTCEEHQAQLVAQGGPGYGQIISCPSCGIQLMKGDGCDSITCVCGHQFRFT 792 C+ C +FS +V G C R+ C R VP RWA +V +E E + A LSFQC CH R++L++E + A + + + T E A +++ Y E ++A+ L+ L P L + +EP + + + D ER A L LR+LR P T CC EHC+ CRT W H +C E+ + A G ++++C C +QL KGDGCDS+TC+CGH F ++ Sbjct: 69 CRGCLDHYFSGVVTGAVIGSCPRVACLYHHARTVPAHRWARVVAKPDELKERHAKAARDALSFQCGSCHARRSLYLEEETANVDSLDAGLCHV-----LGGTAEVKAAVRE----YNEGGMTAEDLYALLAAKLPPL-RAAAENPHGSDVVEPAEVIVDAVARCVADPERRAALQLRHLRTVPRFRTRCCRVEHCFNCRTRAW--HGSQSCAEYARKANASGRV---ELVTCFKCDLQLTKGDGCDSVTCICGHAFSWS 312
BLAST of mRNA_H-akashiwo_Contig966.10.1 vs. uniprot
Match: A0A6G0XXX1_9STRA (RING-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXX1_9STRA) HSP 1 Score: 121 bits (304), Expect = 4.180e-28 Identity = 78/269 (29.00%), Postives = 130/269 (48.33%), Query Frame = 1 Query: 4 LVNMLCGTACPGSICKPCAKQHFSFIVKTGYDGLCRRMHCPACPHRNVPQERWALLVDE--ETLELFKQRASKLLSFQCAGCHTRKNLFVEPSPVQAELAPAKISQLFMVKRMYFTNETWALIQDLLKSYIENEVSADGLFKLFMELWPFLFNCECTRCSWTFFLEPLLQGIQDYERNANLHLRYLRQFPNTVTTCCNREHCWVCRTTWDNHQGLTCEEHQAQLVAQGGPGYGQIISCPSCGIQLMKGDGCDSITCVCGHQFRFTDARQ 804 ++ +CG C S+C C ++ ++ G+ +++CP C +R V + RW + +++F R + + C CH++ N P PV L ++L ++ Y E + ++ + Y ++E+S D L +L + +P + E R LL IQD ER A L LR R+ P T+CC+ + C+ C+T D+H G+ C H + + +CPSC + L+KGDGCD +TC CG F + D Q Sbjct: 42 IITGICGPTCLASVCVDCLAEYIDVRSQSLPRGVLAKLNCPIC-NRPVNETRWKERRPHTADLIDVFADRVAASCTILCPSCHSQYNAL--PCPVDQGL-----NELVDLQPSYL--EKLPALDEICRLYCQHEISPDALCQLVRDAFP-NHHTEVNR--------QLLLYIQDTERRAALFLRLTREQPFIRTSCCSADICFTCKTK-DHHHGVPC--HARTTTNE------DLAACPSCNLTLVKGDGCDQMTCFCGSSFSWRDQVQ 282 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig966.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig966.10.1 >prot_H-akashiwo_Contig966.10.1 ID=prot_H-akashiwo_Contig966.10.1|Name=mRNA_H-akashiwo_Contig966.10.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=268bp MLCGTACPGSICKPCAKQHFSFIVKTGYDGLCRRMHCPACPHRNVPQERWback to top mRNA from alignment at H-akashiwo_Contig966:214144..214959+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig966.10.1 ID=mRNA_H-akashiwo_Contig966.10.1|Name=mRNA_H-akashiwo_Contig966.10.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=816bp|location=Sequence derived from alignment at H-akashiwo_Contig966:214144..214959+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig966:214144..214959+ >mRNA_H-akashiwo_Contig966.10.1 ID=mRNA_H-akashiwo_Contig966.10.1|Name=mRNA_H-akashiwo_Contig966.10.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=804bp|location=Sequence derived from alignment at H-akashiwo_Contig966:214144..214959+ (Heterosigma akashiwo CCMP452)back to top |