mRNA_H-akashiwo_Contig964.6.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig964.6.1 vs. uniprot
Match: A0A7S3Y6S2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6S2_HETAK) HSP 1 Score: 244 bits (623), Expect = 1.890e-79 Identity = 121/141 (85.82%), Postives = 129/141 (91.49%), Query Frame = 1 Query: 1 ESCLYVRRDGAGNELMVAVYVDDRVISGSSSVLVLDFKQSLASKYDLTDQGELTQILGIKVVRDKRNRCFYLCQASFIKDALSKFGLDYLLACKTPIDHTVDLTPTPGFKAELSEAYRYRSMVGTLTWVANWTRPELAFTV 423 ESCLY+ RDG GNELMVAVYVDD VISGSS +V +FKQSLASKY+LTDQGELTQILGIKVVRDKRN+CF+L Q SFIKDAL+KFGLDYL ACKTPIDHTVDLTPTPGFKAELS+A YRSMVGTL WVANWTRPELAFTV Sbjct: 104 ESCLYIHRDG-GNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTV 243
BLAST of mRNA_H-akashiwo_Contig964.6.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK) HSP 1 Score: 243 bits (619), Expect = 1.080e-77 Identity = 120/141 (85.11%), Postives = 128/141 (90.78%), Query Frame = 1 Query: 1 ESCLYVRRDGAGNELMVAVYVDDRVISGSSSVLVLDFKQSLASKYDLTDQGELTQILGIKVVRDKRNRCFYLCQASFIKDALSKFGLDYLLACKTPIDHTVDLTPTPGFKAELSEAYRYRSMVGTLTWVANWTRPELAFTV 423 ESCLY+ RDG GNELMVAVYVDD VISGSS +V +FKQSLASKY LTDQGELTQILGIKVVRDKRN+CF+L Q SFIKDAL+KFGLDYL ACKTP+DHTVDLTPTPGFKAELS+A YRSMVGTL WVANWTRPELAFTV Sbjct: 18 ESCLYIHRDG-GNELMVAVYVDDLVISGSSQAVVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTV 157
BLAST of mRNA_H-akashiwo_Contig964.6.1 vs. uniprot
Match: A0A7S3Y3B6_HETAK (Hypothetical protein (Fragment) n=6 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3B6_HETAK) HSP 1 Score: 142 bits (358), Expect = 4.820e-38 Identity = 69/117 (58.97%), Postives = 86/117 (73.50%), Query Frame = 1 Query: 1 ESCLYVRRDGA-GNELMVAVYVDDRVISGSSSVLVLDFKQSLASKYDLTDQGELTQILGIKVVRDKRNRCFYLCQASFIKDALSKFGLDYLLACKTPIDHTVDLTPTPGFKAELSEA 348 ESCLY R++ G + MVAVYVDD V+S + +V K S S++ +TD G LT ILGIKV RD N+CFYL QASF++DA+SKFGLDYL AC+TP+ + DLTPTPGFKA L +A Sbjct: 292 ESCLYTRKNSVTGEDTMVAVYVDDLVLSSNIPSVVSSLKSSFVSRFSITDLGPLTSILGIKVSRDHTNKCFYLSQASFVRDAISKFGLDYLPACRTPMTNATDLTPTPGFKASLPDA 408
BLAST of mRNA_H-akashiwo_Contig964.6.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK) HSP 1 Score: 101 bits (252), Expect = 2.680e-22 Identity = 51/143 (35.66%), Postives = 86/143 (60.14%), Query Frame = 1 Query: 1 ESCLYVRRDGAGNELMVAVYVDDRVISGSSSVLVLDFKQSLASKYDLTDQGELTQILGIKVVRDKRNRCFYLCQASFIKDALSKFGLDYLLACKTPIDHTVDLTPTPGFKAELS--EAYRYRSMVGTLTWVANWTRPELAFTV 423 +SC+Y + G + +++VYVDD V++ S + K++++ Y+++D GE+ ILGIKV RD+ R L Q SFI++A KF + P++ +D+ LS EA ++RS+VGT+ W+A WT PE+A+++ Sbjct: 662 DSCVYSKVSSTGGKTLISVYVDDIVLASSDKSELSRIKKAISLGYNVSDMGEIESILGIKVQRDRTARTITLSQHSFIEEACEKFQVRSYEPVTNPVNKGIDVNINTDTSRRLSTFEAKKFRSLVGTVNWLALWTFPEVAYSI 804
BLAST of mRNA_H-akashiwo_Contig964.6.1 vs. uniprot
Match: A0A1M2VSW8_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VSW8_TRAPU) HSP 1 Score: 92.4 bits (228), Expect = 3.010e-19 Identity = 52/142 (36.62%), Postives = 90/142 (63.38%), Query Frame = 1 Query: 10 LYVRRDGAGNELMVAVYVDDRVISGSSSVLVLDFKQSLASKYDLTDQGELTQILGIKVVRDKRNRCFYLCQASFIKDALSKFGLDYLLACKTPIDHTVDLTPT--PGFKAELSEAYR--YRSMVGTLTWVANWTRPELAFTV 423 ++ +RDG + +++A++VDD +I+GSS+ L+ ++K+ LA+KY LTD G ++ +LGIKV RD L Q ++I+ +++F D L TP+D T L+ + P A+++ R Y+ +G+L + A TRP++AF V Sbjct: 107 VFFKRDGT-HLVILAIHVDDCLITGSSTRLLAEYKRQLAAKYKLTDLGPVSWLLGIKVSRDLSAHTLALSQHAYIEAIITRFNFDDLKPISTPMDPTSQLSKSQCPESAADVARMRRVPYKEAIGSLMYAAMGTRPDIAFAV 247
BLAST of mRNA_H-akashiwo_Contig964.6.1 vs. uniprot
Match: A0A177UTI3_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177UTI3_9BASI) HSP 1 Score: 92.8 bits (229), Expect = 3.390e-19 Identity = 55/142 (38.73%), Postives = 81/142 (57.04%), Query Frame = 1 Query: 1 ESCLYVRRDGAGNELMVAVYVDDRVISGSSSVLVLDFKQSLASKYDLTDQGELTQILGIKVVRDKRNRCFYLCQASFIKDALSKFGLDYLLACKTPI-DHTVDLTPTPGFKAELSEAYRYRSMVGTLTWVANWTRPELAFTV 423 E CL+VR GAG +++AVYVDD VI+ V K AS Y +TD G L+ ILG++V D R R L Q ++I + K+ ++ A TP+ D + L P +A SE + + +++G L W+A TRP++AF V Sbjct: 806 EPCLFVRF-GAGGSVILAVYVDDIVIAARGQEGVAKVKAEFASWYKITDNGGLSHILGMRVDHDPRTRTAKLGQTAYIDFLVRKYKMESETALPTPMTDASRQLGPNLSGQASKSEVHDFAALIGCLLWLAQGTRPDIAFPV 946
BLAST of mRNA_H-akashiwo_Contig964.6.1 vs. uniprot
Match: A0A2R6NJS8_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6NJS8_9APHY) HSP 1 Score: 91.7 bits (226), Expect = 8.520e-19 Identity = 50/149 (33.56%), Postives = 82/149 (55.03%), Query Frame = 1 Query: 1 ESCLYVRRDGAGNELMVAVYVDDRVISGSSSVLVLDFKQSLASKYDLTDQGELTQILGIKVVRDKRNRCFYLCQASFIKDALSKFGLDYLLACKTPI--DHTVDLTPTPGFKAELSE------AYRYRSMVGTLTWVANWTRPELAFTV 423 + CLYV ++ LMV VYVDD ++G LV FK LA ++D+TD G+LT ILG++V+R+++NR ++ Q ++I+ L +FG+ + TP+ H + +P E +Y +VG + + A TRP++ V Sbjct: 742 DECLYVLKEDGHIVLMVLVYVDDMAVAGKKLALVKRFKHDLAERFDITDGGDLTFILGVQVIRNRQNRTIHMNQTTYIRGFLDRFGMKESMPVHTPLVPKHNLSAMQSPSTPEEQKNYLLYAGELKYLEVVGAVLY-ATQTRPDIQHAV 889
BLAST of mRNA_H-akashiwo_Contig964.6.1 vs. uniprot
Match: A0A4S4K468_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A4S4K468_9APHY) HSP 1 Score: 90.1 bits (222), Expect = 2.220e-18 Identity = 48/135 (35.56%), Postives = 81/135 (60.00%), Query Frame = 1 Query: 31 AGNELMVAVYVDDRVISGSSSVLVLDFKQSLASKYDLTDQGELTQILGIKVVRDKRNRCFYLCQASFIKDALSKFGLDYLLACKTPIDHTVDLTPT--PGFKAELSEAYR--YRSMVGTLTWVANWTRPELAFTV 423 A N ++A++VDD I+GSS+ L+ ++K+ + KY LTD GE++ +LGIKV RD+ R L Q ++I L++F L P+D + LT + P A+++ + YR +G+L + A TRP+++F + Sbjct: 135 ANNITVLAIHVDDCAITGSSTPLISEYKRRIGEKYPLTDLGEVSWLLGIKVARDREARTLSLSQHAYIDSILARFNFTDLKPSSIPMDPNLQLTKSQCPTSLADIARMRKIPYREAIGSLMYAAVGTRPDISFAI 269
BLAST of mRNA_H-akashiwo_Contig964.6.1 vs. uniprot
Match: A0A1K0FVN7_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ustilago bromivora TaxID=307758 RepID=A0A1K0FVN7_9BASI) HSP 1 Score: 89.4 bits (220), Expect = 2.230e-18 Identity = 48/140 (34.29%), Postives = 83/140 (59.29%), Query Frame = 1 Query: 10 LYVRRDGAGNEL-MVAVYVDDRVISGSSSVLVLDFKQSLASKYDLTDQGELTQILGIKVVRDKRNRCFYLCQASFIKDALSKFGLDYLLACKTPIDHTVD-LTPTPGFKAELSEAYRYRSMVGTLTWVANWTRPELAFTV 423 +Y R G+ N + ++AVYVDD ++ G++++ V +Q L+S + +TDQ +++ I+ + V D+ + Q+ +IK L+KFG+D A TP T++ L G A E + Y S+VG+L W+ +RP++ FTV Sbjct: 1 MYTR--GSSNVMVLLAVYVDDLLVIGATALQVKSVRQQLSSAFSITDQDDISHIIRLNVHYDREACMLLINQSGYIKGILTKFGMDEAWAASTPATKTINTLGLREGDTASDEEVHHYASLVGSLLWITQGSRPDITFTV 138
BLAST of mRNA_H-akashiwo_Contig964.6.1 vs. uniprot
Match: A0A2R6PCF8_9APHY (Uncharacterized protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6PCF8_9APHY) HSP 1 Score: 90.1 bits (222), Expect = 3.010e-18 Identity = 48/135 (35.56%), Postives = 81/135 (60.00%), Query Frame = 1 Query: 31 AGNELMVAVYVDDRVISGSSSVLVLDFKQSLASKYDLTDQGELTQILGIKVVRDKRNRCFYLCQASFIKDALSKFGLDYLLACKTPIDHTVDLTPT--PGFKAELSEAYR--YRSMVGTLTWVANWTRPELAFTV 423 A N ++A++VDD I+GSS+ L+ ++K+ + KY LTD GE++ +LGIKV RD+ R L Q ++I L++F L P+D + LT + P A+++ + YR +G+L + A TRP+++F + Sbjct: 1152 ANNITVLAIHVDDCAITGSSTPLISEYKRRIGEKYPLTDLGEVSWLLGIKVARDREARTLSLSQHAYIDSILARFNFTDLKPSSIPMDPNLQLTKSQCPTSLADIARMRKIPYREAIGSLMYAAVGTRPDISFAI 1286 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig964.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig964.6.1 >prot_H-akashiwo_Contig964.6.1 ID=prot_H-akashiwo_Contig964.6.1|Name=mRNA_H-akashiwo_Contig964.6.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=141bp ESCLYVRRDGAGNELMVAVYVDDRVISGSSSVLVLDFKQSLASKYDLTDQback to top mRNA from alignment at H-akashiwo_Contig964:243389..243811+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig964.6.1 ID=mRNA_H-akashiwo_Contig964.6.1|Name=mRNA_H-akashiwo_Contig964.6.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=423bp|location=Sequence derived from alignment at H-akashiwo_Contig964:243389..243811+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig964:243389..243811+ >mRNA_H-akashiwo_Contig964.6.1 ID=mRNA_H-akashiwo_Contig964.6.1|Name=mRNA_H-akashiwo_Contig964.6.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=423bp|location=Sequence derived from alignment at H-akashiwo_Contig964:243389..243811+ (Heterosigma akashiwo CCMP452)back to top |