mRNA_H-akashiwo_Contig959.3.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig959.3.1
Unique NamemRNA_H-akashiwo_Contig959.3.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig959.3.1 vs. uniprot
Match: A0A6S9LBI5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9LBI5_HETAK)

HSP 1 Score: 669 bits (1727), Expect = 2.500e-242
Identity = 319/339 (94.10%), Postives = 322/339 (94.99%), Query Frame = 1
Query:    1 LANAGPPNNNYPAKMTMDWLERNVLCSEAYAVSFAMDIGLISSNRTCPFQGCGAAMQLKPRAGQPRANGGRGPATFIWKCKRSIAGQKHTCTRSIRDGSWFSKSNLTIGEILRFTFLWCNSCGSTTQASISGHSSATVCDWRNFCREVVQIYFIDNSQPIGGPGMIVEIDEAKFGKRKYNRGHRVEGFWVIGAV-------------PESLLPGDQAPRQHRDADTLLPWIAANVRAGSTIQTDGWPAYNGIAQIPNRNYQHTTVVHAHEFVAADGTHTNSIESAWSKVRARIPRHGARKHFADGFLGEYIFQQKCRHGGLDPFMHFLTTVVLSIYAPP 978
            LANAGPPNNNYPAKMTMDWLERNVLCSEAYAV+FAMDIGLISSNRTCPFQGCGAAM+LKPRAGQPRANGGRGPATFIWKCKRSIAGQKHTCTRSI+DGSWFSKSNLTIGEILRFTFLWCNSCGSTTQASISGHSSATVCDWRNFCREVVQIYFIDNSQPIGGPGMIVEIDEAKFGKRKYNRGHRVEGFWVIGAV             PESLLPGDQAP QHRDA TLLPWIAANVRAGSTIQTDGWPAYNGIAQI NRNYQHTTVVHAHEFVAADGTHTNSIESAWSKVRARIPRHGARKHFADGFLGEYIF QKCRHGGLDPFMHFLTTVVLSIYAPP
Sbjct:   55 LANAGPPNNNYPAKMTMDWLERNVLCSEAYAVTFAMDIGLISSNRTCPFQGCGAAMKLKPRAGQPRANGGRGPATFIWKCKRSIAGQKHTCTRSIKDGSWFSKSNLTIGEILRFTFLWCNSCGSTTQASISGHSSATVCDWRNFCREVVQIYFIDNSQPIGGPGMIVEIDEAKFGKRKYNRGHRVEGFWVIGAVARGHPDEVAMLKVPESLLPGDQAPTQHRDAATLLPWIAANVRAGSTIQTDGWPAYNGIAQIANRNYQHTTVVHAHEFVAADGTHTNSIESAWSKVRARIPRHGARKHFADGFLGEYIFHQKCRHGGLDPFMHFLTTVVLSIYAPP 393          
BLAST of mRNA_H-akashiwo_Contig959.3.1 vs. uniprot
Match: A0A6V1TFZ7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TFZ7_HETAK)

HSP 1 Score: 385 bits (989), Expect = 4.300e-132
Identity = 181/184 (98.37%), Postives = 184/184 (100.00%), Query Frame = 1
Query:    1 LANAGPPNNNYPAKMTMDWLERNVLCSEAYAVSFAMDIGLISSNRTCPFQGCGAAMQLKPRAGQPRANGGRGPATFIWKCKRSIAGQKHTCTRSIRDGSWFSKSNLTIGEILRFTFLWCNSCGSTTQASISGHSSATVCDWRNFCREVVQIYFIDNSQPIGGPGMIVEIDEAKFGKRKYNRGHR 552
            LANAGPPNNNYPAKMTMDWLERNVLCSEAYAV+FAMDIGLISSNRTCPFQGCGAAM+LKPRAGQPRANGGRGPATFIWKCKRSIAGQKHTCTRSI+DGSWFSKSNLTIGEILRFTFLWCNSCGSTTQASISGHSSATVCDWRNFCREVVQIYFIDNSQPIGGPGMIVEIDEAKFGKRKYNRGHR
Sbjct:   55 LANAGPPNNNYPAKMTMDWLERNVLCSEAYAVTFAMDIGLISSNRTCPFQGCGAAMKLKPRAGQPRANGGRGPATFIWKCKRSIAGQKHTCTRSIKDGSWFSKSNLTIGEILRFTFLWCNSCGSTTQASISGHSSATVCDWRNFCREVVQIYFIDNSQPIGGPGMIVEIDEAKFGKRKYNRGHR 238          
BLAST of mRNA_H-akashiwo_Contig959.3.1 vs. uniprot
Match: UPI0018D95A36 (uncharacterized protein LOC119721326 n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D95A36)

HSP 1 Score: 223 bits (569), Expect = 2.380e-67
Identity = 126/326 (38.65%), Postives = 176/326 (53.99%), Query Frame = 1
Query:   13 GPPNNNYPAKMTMDWLERNVLCSEAYAVSFAMDIGLISSNRTCPFQG-CGAAMQLKPRAGQPRANGGRGPATFIWKCKRSIAGQKHTCTRSIRDGSWFSKSNLTIGEILRFTFLWCNSCGSTT---QASISGHSSATVCDWRNFCREVVQIYFID-NSQPIGGPGMIVEIDEAKFGKRKYNRGHRVEGFWVIGAVPESLLPGDQAPRQHRDADTLLPWIAANVRAGSTIQTDGWPAYNGIAQIPNRNYQHTTVVHAHEFVAADGTHTNSIESAWSKVRARIPRHGARKHFADGFLGEYIFQQKCRHGGLDPFMHFLTTVVLSIYAP 975
            G  ++N  A +T D L R VLCS+   +S+  DIGLI+    CP  G C A ++   RA   +           W+C+R I  ++H C +SIR GSWF++SNL++ E L+FT+ WC          Q  +  H   T  DW  FCRE  ++  +  + + +GG G  V+IDE+K GKRKY RGH+VEG WV G + E          +HRD  TLLP I   +  G+TI +D W AY     +P   Y H TV H+ EFV  DG+HTN IE  W +++  +  HG RKH    +L E++++ K  H   D F  F+  VV  +Y P
Sbjct:   36 GKSDDNRDAFLTYDRLCREVLCSQDAIISWCQDIGLIAKAMPCPTCGECMAIVETNDRADHMK-----------WECRRQIGRKRHRCEKSIRSGSWFAQSNLSLEETLKFTYWWCCDLKQDQIRQQLQLGKH---TAVDWDMFCRETCEVVMMQADKKKVGGEGKRVQIDESKIGKRKYYRGHQVEGQWVFGGIEEDSRECFIVTVEHRDEATLLPLIQEWIAPGTTIISDCWKAY---INLPKYGYTHETVNHSKEFVNKDGSHTNKIEGHWRQMKTNLSTHGRRKHHYASYLAEFLYRYK--HKDSDIFKAFIHDVV-KVYNP 341          
BLAST of mRNA_H-akashiwo_Contig959.3.1 vs. uniprot
Match: A0A6S7IH39_PARCT (DDE_Tnp_IS1595 domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7IH39_PARCT)

HSP 1 Score: 221 bits (564), Expect = 1.630e-66
Identity = 118/306 (38.56%), Postives = 169/306 (55.23%), Query Frame = 1
Query:   46 TMDWLERNVLCSEAYAVSFAMDIGLISSNRTCPFQGCGAAMQLKPRAGQPRANGGRGPATFIWKCKRSIAGQKHTCTRSIRDGSWFSKSNLTIGEILRFTFLWCNSCGSTT---QASISGHSSATVCDWRNFCREVVQIYFIDNSQPIGGPGMIVEIDEAKFGKRKYNRGHRVEGFWVIGAVPESLLPGDQAPRQHRDADTLLPWIAANVRAGSTIQTDGWPAYNGIAQIPNRNYQHTTVVHAHEFVAADGTHTNSIESAWSKVRARIPRHGARKHFADGFLGEYIFQQKCRHGGLDPFMHFLTTV 954
            T D L   VL S+   + + MD GLI+ +R C    C   + +K    + R++       + W+C++S+ G++H    SIR GSWF KSN+T+ E+L+FT+ WC          + +I+ H   T  DW +FCRE  ++  ++   PIGGPG IV+IDE+KFGKRKY+RGHRVEG WV G + E          + RD  TLLP I  ++  GS I +D W AY     +    Y+H  V H+ EFV  DG HTN IE  W + + ++P  G RK     +L E++++ +  H G D F  FL  V
Sbjct:   55 TYDLLRDEVLRSKEEIIRWCMDEGLIAKSRLC----CHCDLPMKLVKCEDRSD------KYKWECRKSVNGKRHKVEISIRKGSWFEKSNMTLEEVLKFTYWWCRDVRQEEIRHELNIAAH---TAVDWDSFCRETCEVTLMEREHPIGGPGKIVQIDESKFGKRKYHRGHRVEGQWVFGGIEEESRRSFMVAVEKRDESTLLPIIERHIAKGSIIVSDCWKAY---INLEKHGYEHRLVNHSKEFVNKDGDHTNKIEGHWRQAKCKMPSFGVRKIAFSSYLAEFLWRYE--HKGKDLFSTFLWDV 342          
BLAST of mRNA_H-akashiwo_Contig959.3.1 vs. uniprot
Match: UPI00077AD346 (uncharacterized protein LOC107354628 n=2 Tax=Acropora TaxID=6127 RepID=UPI00077AD346)

HSP 1 Score: 216 bits (549), Expect = 2.220e-64
Identity = 119/302 (39.40%), Postives = 172/302 (56.95%), Query Frame = 1
Query:   58 LERNVLCSEAYAVSFAMDIGLISSNRTCPFQGCGAAMQLKPRAGQPRANGGRGPATFIWKCKRSIAGQKHTCTRSIRDGSWFSKSNLTIGEILRFTFLWC---NSCGSTTQASISGHSSATVCDWRNFCREVVQIYFIDNSQPIGGPGMIVEIDEAKFGKRKYNRGHRVEGFWVIGAVPESLLPGDQAPRQHRDADTLLPWIAANVRAGSTIQTDGWPAYNGIAQIPNRNYQHTTVVHAHEFVAADGTHTNSIESAWSKVRARIPRHGARKHFADGFLGEYIFQQKCRHGGLDPFMHFLTTV 954
            L +N L  + + +S+  D GLI+ +R C    CG+ M+L  ++G  R++G      + W+C++ + G++H C RSIR+GSWF K+NLTI E+L+FT+ WC   N      Q  +  H   T  DW  FCREV ++   D  + IGGPG  V+IDE+K GKRKY+RGH VEG WV G + E       A  + R  +TLL  I   +  G+TI +D W  Y  +++     Y H TV H+ EFV  +G HTN IE  W +++AR+P HG +K     +L E  F+ +  H G D +  FL  +
Sbjct:   50 LLQNYLWDKDFTLSWLKDEGLIAPSRICTI--CGSEMKLV-KSGD-RSDG------YYWECRKQVNGKRHRCERSIREGSWFEKANLTIEEVLKFTYWWCQDLNQWQIKQQLQLGSH---TAVDWDMFCREVCEVALFDGREKIGGPGRFVQIDESKIGKRKYHRGHVVEGQWVFGGIEEDSRKCFIATVEDRKEETLLNLIKQWIEPGTTIISDCWKGYVNLSR---HGYIHKTVNHSVEFVNEEGFHTNKIEGHWRQMKARLPTHGRKKEHYSSYLAE--FKWRYIHSGEDLWKAFLKDI 333          
BLAST of mRNA_H-akashiwo_Contig959.3.1 vs. uniprot
Match: UPI001069C47C (uncharacterized protein LOC114531145 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI001069C47C)

HSP 1 Score: 207 bits (527), Expect = 3.900e-62
Identity = 100/244 (40.98%), Postives = 141/244 (57.79%), Query Frame = 1
Query:  232 WKCKRSIAGQKHTCTRSIRDGSWFSKSNLTIGEILRFTFLWCNSCGSTT---QASISGHSSATVCDWRNFCREVVQIYFIDNSQPIGGPGMIVEIDEAKFGKRKYNRGHRVEGFWVIGAVPESLLPGDQAPRQHRDADTLLPWIAANVRAGSTIQTDGWPAYNGIAQIPNRNYQHTTVVHAHEFVAADGTHTNSIESAWSKVRARIPRHGARKHFADGFLGEYIFQQKCRHGGLDPFMHFLTTV 954
            W+C+R I G++H    SIR  SWF +SNLT+ EI++ T+ WC          + +IS H   T  DW +FCRE+ ++  ++  + IGGPG  V+IDE+KFGKRKY+RGH+VEG WV G + E          + RD +TLLP I  ++  GSTI +D W AY     +    Y H  V H+ EFV  DG HTN IE  W + + ++P  G RK+     L E++++ +  H G D F+ FL  V
Sbjct:   16 WECRRQIDGKRHRVEMSIRKDSWFEESNLTLAEIVKLTYWWCRGVSQENIRHEVNISEH---TAVDWDSFCREICEVTLLEREEKIGGPGKTVQIDESKFGKRKYHRGHKVEGQWVFGGIEEESRRSFMVAVEKRDEETLLPLIKRHIAEGSTIVSDCWKAY---VNLKKHGYVHKCVNHSKEFVNTDGDHTNKIEGHWRQAKTKMPDFGTRKYMFSSHLAEFLWRYE--HKGSDLFLRFLVDV 251          
BLAST of mRNA_H-akashiwo_Contig959.3.1 vs. uniprot
Match: UPI00106D5865 (uncharacterized protein LOC114527760 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106D5865)

HSP 1 Score: 209 bits (532), Expect = 1.180e-61
Identity = 114/309 (36.89%), Postives = 168/309 (54.37%), Query Frame = 1
Query:   46 TMDWLERNVLCSEAYAVSFAMDIGLISSNRTCPFQGCGAAMQLKPRAGQPRANGGRGPATFIWKCKRSIAGQKHTCTRSIRDGSWFSKSNLTIGEILRFTFLWCNSCGSTTQASISGHSSATVCDWRNFCREVVQIYFIDNSQPIGGPGMIVEIDEAKFGKRKYNRGHRVEGFWVIGAVPESLLPGDQAPRQHRDADTLLPWIAANVRAGSTIQTDGWPAYNGIAQIPNRNYQHTTVVHAHEFVAADGTHTNSIESAWSKVRARIPRHGARKHFADGFLGEYIFQQKCRHGGLDPFMHFLTTVVLSIYA 972
            T D L+  VL S+   +S+ M+  LI+++R CP   C    ++K      R++G +      W+C++ +  ++H    SIR GSWF +SNLT+ EIL+ T+ WC              S  TV DW +FCRE+ ++ +++  + IGGP   V+IDE+KFGKRKY+RGHRVEG WV G + E            R   TLLP I   +  G+TI +D W AY  + +     Y+H  V H+ EFV  DG HTN IE  W + + + P  G RK+    +L E++++ + +  G D F  FL    L IY+
Sbjct:   61 TYDKLKDEVLLSKNRVLSWLMEKRLIANSRLCPQCDC----EMKLVECNDRSDGCK------WECRKQMHSKRHKIELSIRKGSWFERSNLTLEEILKLTYWWCRGVEQEVMRFEVDVSGNTVADWDSFCREICEVNYLECKEKIGGPNKRVQIDESKFGKRKYHRGHRVEGQWVFGGIEEDSRKSFMFAVDDRSEKTLLPIIETFIEKGTTIISDCWKAYTNLEK---HGYKHLLVNHSKEFVKKDGDHTNKIEGHWRQAKVKFPAFGIRKYMCSSYLAEFLWRYEYK--GEDLFEVFLKDA-LKIYS 353          
BLAST of mRNA_H-akashiwo_Contig959.3.1 vs. uniprot
Match: UPI00077A710A (uncharacterized protein LOC107343859 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A710A)

HSP 1 Score: 209 bits (532), Expect = 1.210e-61
Identity = 121/324 (37.35%), Postives = 174/324 (53.70%), Query Frame = 1
Query:    1 LANAGPPNNNYPAKMTMDWLERNVLCSEAYAVSFAMDIGLISSNRTCPFQGCGAAMQLKPRAGQPRANGGRGPATFIWKCKRSIAGQKHTCTRSIRDGSWFSKSNLTIGEILRFTFLWCNSCGSTTQASISGHSSATVCDWRNFCREVVQIYFIDNSQPIGGPGMIVEIDEAKFGKRKYNRGHRVEGFWVIGAVPESLLPGDQAPRQHRDADTLLPWIAANVRAGSTIQTDGWPAYNGIAQIPNRNYQHTTVVHAHEFVAADGTHTNSIESAWSKVRARIPRHGARKHFADGFLGEYIFQQKCRHGGLDPFMHFLTTVVLSIYA 972
            L NA    NN   K   + L  +V   E   + + M  GL++  R CP   C A M+L   +   R++G      F W+C+  + G++H    SIR GSWF++SN+T+ E+L+FT+ WC     +      G +  T  DW +FCREV +I   +NS  IGG G +V+IDE+KFGKRKY+RGH VEG WV G + E          + RD +TLLP I   +  G+ I +D W AY  + +     Y H+TV H+ EFV   G HTN IE  W + + ++P  G RKH    +L E++++   ++   D F  FL  V   +YA
Sbjct:   48 LTNASYDRNNAQKKWRFEDLLDHVKDKELL-IKWLMCEGLMAKARVCPR--CSAEMKLV--SCNDRSDG------FKWECQLQMDGKRHKVETSIRKGSWFAQSNMTLEEVLKFTYWWCLDLDQSQIRHEMGLACGTGVDWDSFCREVCEIAMFENSAKIGGEGKVVQIDESKFGKRKYHRGHHVEGQWVFGGIEEDSRRSFLIAVEKRDEETLLPLIKKWIEPGTVIVSDCWKAYYNLEK---HGYTHSTVNHSQEFVNNQGKHTNKIEGHWRQAKVKLPPFGVRKHHFSSYLAEFMWRYTNKNK--DLFAVFLEDVK-KVYA 354          
BLAST of mRNA_H-akashiwo_Contig959.3.1 vs. uniprot
Match: UPI001CF0F3E9 (uncharacterized protein LOC114949467 n=2 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF0F3E9)

HSP 1 Score: 207 bits (527), Expect = 2.260e-61
Identity = 110/293 (37.54%), Postives = 162/293 (55.29%), Query Frame = 1
Query:   94 VSFAMDIGLISSNRTCPFQGCGAAMQLKPRAGQPRANGGRGPATFIWKCKRSIAGQKHTCTRSIRDGSWFSKSNLTIGEILRFTFLWCNSCGSTTQASISGHSSATVCDWRNFCREVVQIYFIDNSQPIGGPGMIVEIDEAKFGKRKYNRGHRVEGFWVIGAVPESLLPGDQAPRQHRDADTLLPWIAANVRAGSTIQTDGWPAYNGIAQIPNRNYQHTTVVHAHEFVAADGTHTNSIESAWSKVRARIPRHGARKHFADGFLGEYIFQQKCRHGGLDPFMHFLTTVVLSIYA 972
            V + MD  L++  R+CP   C   M L     + R++G        W+C++ + G++H    SIR GSWF  S +T+ EIL+ T+ WC     +      G + +T  DW NFC EV +I  ++NS+ +GG G +V+IDE+KFGKRKY+RGH VEG WV G + E          + RD  TLLP I   +  G+ I +D W AY+   ++    Y+H TV H+ EFV  DG HTN IE  W   ++++P+ G RK+    ++ E+I++   R    D F  FL+ V   +YA
Sbjct:   32 VHWLMDKELMAKERSCPM--CAGEMSLTRC--EDRSDG------LKWECRKQVNGKRHKTEVSIRKGSWFDNSKMTLEEILKLTYWWCQDLDQSQIKHELGLAESTGVDWDNFCHEVCEITLVENSEKLGGNGKVVQIDESKFGKRKYHRGHHVEGQWVFGGIEEDSRKCFLVAVEKRDEQTLLPIIKKWIEPGTIIVSDCWKAYS---KLETHGYEHRTVNHSREFVNKDGDHTNKIEGHWRHAKSKLPKFGVRKYLFSTYMAEFIWRYMQRDE--DLFQVFLSDVK-KVYA 308          
BLAST of mRNA_H-akashiwo_Contig959.3.1 vs. uniprot
Match: UPI000C05569D (uncharacterized protein LOC111343674 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C05569D)

HSP 1 Score: 207 bits (527), Expect = 7.980e-61
Identity = 105/277 (37.91%), Postives = 153/277 (55.23%), Query Frame = 1
Query:   94 VSFAMDIGLISSNRTCPFQGCGAAMQLKPRAGQPRANGGRGPATFIWKCKRSIAGQKHTCTRSIRDGSWFSKSNLTIGEILRFTFLWCNSCGSTTQASISGHSSATVCDWRNFCREVVQIYFIDNSQPIGGPGMIVEIDEAKFGKRKYNRGHRVEGFWVIGAVPESLLPGDQAPRQHRDADTLLPWIAANVRAGSTIQTDGWPAYNGIAQIPNRNYQHTTVVHAHEFVAADGTHTNSIESAWSKVRARIPRHGARKHFADGFLGEYIFQQKCRHGGL 924
            V + MD GL++  R+CP   C   M L     + R++G        W+C++ + G++H    SIR GSWF KSN+T+ EIL+ T+ WC            G + +T  DW +FCREV +I  ++N + +GG G +V+IDE+KFGKRKY+RGH VEG WV G + E          + RD  TLLP I   +  G+ I +D W  Y+    +   +Y+H TV H+ EFV  +G HTN IE  W   + ++P  G RKH    +L E++++   R   L
Sbjct:   74 VYWLMDEGLMAKGRSCPM--CAGEMSLTRC--EDRSDG------LKWECRKQVNGKRHKAEVSIRKGSWFEKSNMTLEEILKLTYWWCQDLDQAQIKHEVGLAESTGVDWDSFCREVCEIILLENGEKLGGKGKVVQIDESKFGKRKYHRGHHVEGQWVFGGIEEGTRKCFVVAVEKRDEQTLLPIIQKWIEPGTIIVSDCWKTYS---TLDKHDYEHRTVNHSVEFVNKEGDHTNKIEGHWRHAKCKLPMFGVRKHLFSTYLAEFMWRYMHRDNDL 337          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig959.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6S9LBI5_HETAK2.500e-24294.10Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6V1TFZ7_HETAK4.300e-13298.37Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
UPI0018D95A362.380e-6738.65uncharacterized protein LOC119721326 n=1 Tax=Patir... [more]
A0A6S7IH39_PARCT1.630e-6638.56DDE_Tnp_IS1595 domain-containing protein n=1 Tax=P... [more]
UPI00077AD3462.220e-6439.40uncharacterized protein LOC107354628 n=2 Tax=Acrop... [more]
UPI001069C47C3.900e-6240.98uncharacterized protein LOC114531145 n=1 Tax=Dendr... [more]
UPI00106D58651.180e-6136.89uncharacterized protein LOC114527760 n=1 Tax=Dendr... [more]
UPI00077A710A1.210e-6137.35uncharacterized protein LOC107343859 n=1 Tax=Acrop... [more]
UPI001CF0F3E92.260e-6137.54uncharacterized protein LOC114949467 n=2 Tax=Acrop... [more]
UPI000C05569D7.980e-6137.91uncharacterized protein LOC111343674 n=1 Tax=Stylo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig959contigH-akashiwo_Contig959:14202..15221 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog7668.SPU_009567-tr
PFAMsDDE_Tnp_IS1595
Model size981
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons2
Evalue9.71e-55
EggNOG OGs2CY95@1|root,2S2X3@2759|Eukaryota,3A4AR@33154|Opisthokonta,3BRVC@33208|Metazoa,3D8TC@33213|Bilateria
DescriptionISXO2-like transposase domain
Cds size981
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388059.035663-CDS-H-akashiwo_Contig959:14201..146031681388059.035663-CDS-H-akashiwo_Contig959:14201..14603Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig959 14202..14603 -
1681388059.0476422-CDS-H-akashiwo_Contig959:14642..152211681388059.0476422-CDS-H-akashiwo_Contig959:14642..15221Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig959 14643..15221 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig959.3.1prot_H-akashiwo_Contig959.3.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig959 14202..15221 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig959.3.1

>prot_H-akashiwo_Contig959.3.1 ID=prot_H-akashiwo_Contig959.3.1|Name=mRNA_H-akashiwo_Contig959.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=327bp
LANAGPPNNNYPAKMTMDWLERNVLCSEAYAVSFAMDIGLISSNRTCPFQ
GCGAAMQLKPRAGQPRANGGRGPATFIWKCKRSIAGQKHTCTRSIRDGSW
FSKSNLTIGEILRFTFLWCNSCGSTTQASISGHSSATVCDWRNFCREVVQ
IYFIDNSQPIGGPGMIVEIDEAKFGKRKYNRGHRVEGFWVIGAVPESLLP
GDQAPRQHRDADTLLPWIAANVRAGSTIQTDGWPAYNGIAQIPNRNYQHT
TVVHAHEFVAADGTHTNSIESAWSKVRARIPRHGARKHFADGFLGEYIFQ
QKCRHGGLDPFMHFLTTVVLSIYAPP*
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mRNA from alignment at H-akashiwo_Contig959:14202..15221-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig959.3.1 ID=mRNA_H-akashiwo_Contig959.3.1|Name=mRNA_H-akashiwo_Contig959.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1020bp|location=Sequence derived from alignment at H-akashiwo_Contig959:14202..15221- (Heterosigma akashiwo CCMP452)
CTTGCTAATGCTGGCCCTCCAAACAACAACTACCCGGCAAAGATGACCAT GGATTGGCTGGAGCGAAATGTTCTGTGCTCTGAAGCATACGCCGTGAGTT TTGCAATGGACATTGGGCTTATTTCGAGCAACAGAACATGCCCATTTCAA GGGTGTGGTGCGGCGATGCAGCTCAAGCCCCGTGCTGGTCAGCCTCGTGC CAATGGAGGTCGTGGCCCTGCCACCTTTATCTGGAAATGCAAGCGTTCCA TTGCTGGCCAGAAGCACACATGCACCCGTTCTATCAGGGATGGCTCTTGG TTCTCAAAGTCCAACCTAACCATCGGCGAGATCCTGCGTTTTACTTTCCT GTGGTGCAACAGTTGCGGCTCAACCACCCAGGCATCCATCTCAGGCCATA GCAGTGCAACTGTATGTGACTGGCGCAACTTCTGCAGAGAGGTTGTCCAG ATTTACTTCATTGACAACAGCCAACCCATTGGAGGACCTGGAATGATCGT CGAGATCGACGAGGCCAAATTCGGCAAGAGGAAGTACAACAGGGGGCACC GTGTTGAAGGCTTCTGGGTCATTGGCGCTGTTGCCAGGGGCCACCCTGAT GAGGTGGCCATGCTGAAGGTCCCCGAGTCCCTGCTTCCTGGTGACCAAGC ACCCCGCCAGCACCGTGATGCTGACACCCTCCTCCCTTGGATTGCAGCCA ATGTGCGTGCTGGGTCTACCATCCAGACTGACGGCTGGCCAGCCTACAAT GGCATTGCCCAGATTCCCAACCGCAACTACCAGCACACCACTGTGGTGCA CGCCCACGAATTTGTTGCTGCTGATGGCACCCACACCAACTCCATTGAGT CTGCCTGGAGCAAGGTACGGGCACGCATCCCACGCCATGGTGCCCGCAAG CATTTTGCTGATGGTTTCCTGGGTGAGTACATCTTCCAGCAGAAGTGCCG CCATGGTGGATTGGACCCATTCATGCATTTCCTGACCACTGTGGTCCTCT CCATCTACGCTCCTCCTTGA
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Coding sequence (CDS) from alignment at H-akashiwo_Contig959:14202..15221-

>mRNA_H-akashiwo_Contig959.3.1 ID=mRNA_H-akashiwo_Contig959.3.1|Name=mRNA_H-akashiwo_Contig959.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=981bp|location=Sequence derived from alignment at H-akashiwo_Contig959:14202..15221- (Heterosigma akashiwo CCMP452)
CTTGCTAATGCTGGCCCTCCAAACAACAACTACCCGGCAAAGATGACCAT
GGATTGGCTGGAGCGAAATGTTCTGTGCTCTGAAGCATACGCCGTGAGTT
TTGCAATGGACATTGGGCTTATTTCGAGCAACAGAACATGCCCATTTCAA
GGGTGTGGTGCGGCGATGCAGCTCAAGCCCCGTGCTGGTCAGCCTCGTGC
CAATGGAGGTCGTGGCCCTGCCACCTTTATCTGGAAATGCAAGCGTTCCA
TTGCTGGCCAGAAGCACACATGCACCCGTTCTATCAGGGATGGCTCTTGG
TTCTCAAAGTCCAACCTAACCATCGGCGAGATCCTGCGTTTTACTTTCCT
GTGGTGCAACAGTTGCGGCTCAACCACCCAGGCATCCATCTCAGGCCATA
GCAGTGCAACTGTATGTGACTGGCGCAACTTCTGCAGAGAGGTTGTCCAG
ATTTACTTCATTGACAACAGCCAACCCATTGGAGGACCTGGAATGATCGT
CGAGATCGACGAGGCCAAATTCGGCAAGAGGAAGTACAACAGGGGGCACC
GTGTTGAAGGCTTCTGGGTCATTGGCGCTGTCCCCGAGTCCCTGCTTCCT
GGTGACCAAGCACCCCGCCAGCACCGTGATGCTGACACCCTCCTCCCTTG
GATTGCAGCCAATGTGCGTGCTGGGTCTACCATCCAGACTGACGGCTGGC
CAGCCTACAATGGCATTGCCCAGATTCCCAACCGCAACTACCAGCACACC
ACTGTGGTGCACGCCCACGAATTTGTTGCTGCTGATGGCACCCACACCAA
CTCCATTGAGTCTGCCTGGAGCAAGGTACGGGCACGCATCCCACGCCATG
GTGCCCGCAAGCATTTTGCTGATGGTTTCCTGGGTGAGTACATCTTCCAG
CAGAAGTGCCGCCATGGTGGATTGGACCCATTCATGCATTTCCTGACCAC
TGTGGTCCTCTCCATCTACGCTCCTCCTTGA
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