mRNA_H-akashiwo_Contig958.1.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig958.1.1 vs. uniprot
Match: A0A6V1NUE4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NUE4_HETAK) HSP 1 Score: 138 bits (348), Expect = 6.110e-34 Identity = 86/181 (47.51%), Postives = 112/181 (61.88%), Query Frame = 1 Query: 295 GTVQQLVTLPLSPLTSPSLKKHSP-EVASTMSMTAAIFSLAKVLIGAGMLALPGGMAAGKGTGLIPAAIIMAFSALASAYTFYIIGISLHATKTKTFKELMVATRGPRAGAAVNGIILALGLCLGLLYADFVGDLFATLLRG--WLPAWAAQRQVVILILTATVLGPLCLQRDLNALRHSS 828 G +QQ T PLS SPS P + M AA +LAKV+ GAGML+LP GMAAG+GTG YTF+ +G+ L T+T +FK+L++ T GP +G ++ II+ALG LGLLY DFVGDLF+++L W+P W A R VVI++ + LGPL L +DL ALRHSS Sbjct: 44 GYMQQYGT-PLSAAFSPSPFLRRPGDPPIKMGFLAATINLAKVMAGAGMLSLPSGMAAGRGTGYAXXXXXXXXXXXXGGYTFFSLGVCLRYTRTASFKDLLIVTLGPWSGWCIDVIIVALGFSLGLLYVDFVGDLFSSVLASFSWIPDWVASRDVVIIVASICFLGPLSLAKDLYALRHSS 223
BLAST of mRNA_H-akashiwo_Contig958.1.1 vs. uniprot
Match: A0A4D9D223_9STRA (Aa_trans domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D223_9STRA) HSP 1 Score: 130 bits (326), Expect = 2.230e-31 Identity = 74/142 (52.11%), Postives = 102/142 (71.83%), Query Frame = 1 Query: 406 SLAKVLIGAGMLALPGGMAAGKGTGLIPAAIIMAFSALASAYTFYIIGISLHATKTKTFKELMVATRGPRAGAAVNGIILALGLCLGLLYADFVGDLFATLLRG-WLPAWAAQRQVVILILTATVLGPLCLQRDLNALRHSS 828 +LAK +IG GMLALP G+AAG GTG IPA +++AFSA++SAYTF ++G S+ AT++++FKE T GP V+ I AL + ++YA FVGD F +LL+G LPAW + R+ IL +T TVL PL L +DL+AL++SS Sbjct: 3 NLAKNIIGGGMLALPAGLAAGAGTGYIPAYLLLAFSAVSSAYTFVLVGRSVEATRSRSFKEAWSRTVGPAQAWVVDYAITALAFAVCIVYACFVGDTFTSLLKGAGLPAWLSSREASILAVTITVLFPLTLLKDLSALQYSS 144
BLAST of mRNA_H-akashiwo_Contig958.1.1 vs. uniprot
Match: A0A835ZGQ0_9STRA (Transmembrane amino acid transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGQ0_9STRA) HSP 1 Score: 124 bits (311), Expect = 3.690e-29 Identity = 79/159 (49.69%), Postives = 106/159 (66.67%), Query Frame = 1 Query: 388 MTAAIFSLAKVLIGAGMLALPGGMAAGKGTGLIPAAIIMAFSALASAYTFYIIGISLHATKTKTFKELMVATRGPRAGAAVNGIILALGLCLGLLYADFVGDLFATLLRGW--LPAWAAQRQVVILILTATVLGPLCLQRDLNALRHSS-ARARLVLYI 855 MTA+ F+LAK +IG GMLALP GMAAG+GTG PA +MA + + SAYTF ++G S+ AT ++FK+L T GP++ AV+ I AL + ++Y F+GDLF++L +PA A R I+ +TA VL PLCL RDL+ALR SS A VLY+ Sbjct: 1 MTASTFNLAKNIIGGGMLALPAGMAAGRGTGYAPAFALMAATCVLSAYTFVLVGKSVDATGARSFKDLWAKTIGPKSAWAVDAAIFALCFGVCIMYGCFLGDLFSSLAGAVPAIPAALASRTSAIVGITAVVLLPLCLLRDLSALRFSSMAGIGAVLYV 159
BLAST of mRNA_H-akashiwo_Contig958.1.1 vs. uniprot
Match: A0A7S3ZVI9_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZVI9_9STRA) HSP 1 Score: 100 bits (248), Expect = 2.730e-20 Identity = 69/172 (40.12%), Postives = 97/172 (56.40%), Query Frame = 1 Query: 313 VTLPLSPLTSPSLKKHSPEVASTMSMTAAIFSLAKVLIGAGMLALPGGMAAGKGTGLIPAAIIMAFSALASAYTFYIIGISLHATKTKTFKELMVATRGPRAGAAVNGIILALGLCLGLLYADFVGDLFATLLRGWLPAWAAQRQVVILILTATVLGPLCLQRDLNALRHSS 828 +T P S L +P K M+ T A SL K ++G G+LALP GMAAG+GTG++P +I+A A ASAYT+ ++G S+ T++KTF EL A G ++ II+ + L Y+ F GDL L +R I +LT +GPL L RDL+AL+HS+ Sbjct: 16 ITPPKSKLNAPKTLKQ--RGGGAMTETQATVSLFKTIVGGGILALPAGMAAGRGTGVLPGLLILALHAGASAYTYSLVGRSVAKTRSKTFSELWSAAFGRETSWIIDLIIVGVAGGAALTYSCFTGDLLKQLS-------GIERTRAIALLTLFPIGPLALLRDLSALKHST 178
BLAST of mRNA_H-akashiwo_Contig958.1.1 vs. uniprot
Match: A0A7S1Y958_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y958_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 3.190e-18 Identity = 66/162 (40.74%), Postives = 94/162 (58.02%), Query Frame = 1 Query: 346 SLKKHSPEVASTMSMTAAIFSLAKVLIGAGMLALPGGMAAGKGTGLIPAAIIMAFSALASAYTFYIIGISLHATKTKTFKELMVATRGPRAGAAVNGIILALGLCLGLLYADFVGDLFATLL-RGWLPAWAAQRQVVILILTATVLGPLCLQRDLNALRHSS 828 S KK T SM+A+IF+L + GAG+L L GMA GTG + A++I A S++TF +IG + T K FK L T GP + V+G+I L L ++Y+ +GD+F LL R LPA R IL+LTAT+L PLC+ ++L++L +S Sbjct: 16 STKKIDAISGGTSSMSASIFNLVNNVAGAGILTLSAGMA--SGTGWVSASLICAVLGFLSSHTFTLIGEACALTGEKDFKGLWARTMGPNSTFVVDGMITILCLACTVIYSGILGDVFTPLLARAGLPAHMNGRSSNILVLTATMLFPLCMIKNLSSLAFTS 175
BLAST of mRNA_H-akashiwo_Contig958.1.1 vs. uniprot
Match: A0A7S0L936_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L936_9EUKA) HSP 1 Score: 92.4 bits (228), Expect = 3.350e-18 Identity = 64/162 (39.51%), Postives = 92/162 (56.79%), Query Frame = 1 Query: 379 TMSMTAAIFSLAKVLIGAGMLALPGGMAAGKGTGLIPAAIIMAFSALASAYTFYIIGISLHATKTKTFKELMVATRGPRAGAAVNGIILALGLCLGLLYADFVGDLFATLLR-GWLPAWAAQRQVVILILTATVLGPLCLQRDLNALRHSSARARL-VLYIA 858 T S+T + + + GAG+L L GMAAG G +PA +I S +TFY+IG + T +FK+L AT G R+ V+G I + L ++Y+ +GD+F+ LL+ +PA RQ I+ LTA VL PL L +DL+AL +SA L +LY A Sbjct: 109 TCSITMTVLQIVNNVAGAGILTLAAGMAAG--VGWVPALVICVVLGAISGFTFYLIGAACELTGQTSFKDLWGATLGKRSAWVVDGCIALMCLSAAIIYSGILGDVFSALLKLAGVPASKWLRQATIVTLTALVLAPLSLLKDLSALSFTSALGCLAILYTA 268
BLAST of mRNA_H-akashiwo_Contig958.1.1 vs. uniprot
Match: A0A7S4UX82_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4UX82_9DINO) HSP 1 Score: 82.4 bits (202), Expect = 4.610e-14 Identity = 59/152 (38.82%), Postives = 87/152 (57.24%), Query Frame = 1 Query: 385 SMTAAIFSLAKVLIGAGMLALPGGMAAGKGTGLIPAAIIMAFSALASAYTFYIIGISLHATKTKTFKELMVATRGP--RAGAAVNGIILALGLCLGLLYADFVGDLFATLLRG--WLPAWAAQRQVVILILTATVLGPLCLQRDLNALRHSS 828 S+ A+F++ K ++G GML+LP G+AAG G GL A +I+ LA YTF ++G + + T+TKT K A GP AV + CL YA +GD ++ +L W + RQV++L +TA +L PL LQRDL+ L ++S Sbjct: 42 SIPQAVFNIVKNIVGEGMLSLPAGVAAGTGLGL--AIVILTLFGLALGYTFSVMGRACNVTRTKTHKGCGEALSGPVFAQTMAVMCTLKTASTCLA--YAIVLGDSYSRILHFFCWRDPFWTSRQVILLGITALILLPLVLQRDLSCLSYAS 189
BLAST of mRNA_H-akashiwo_Contig958.1.1 vs. uniprot
Match: A0A7S2XUG8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUG8_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 3.540e-13 Identity = 52/142 (36.62%), Postives = 83/142 (58.45%), Query Frame = 1 Query: 409 LAKVLIGAGMLALPGGMAAGKGTGLIPAAIIMAFSALASAYTFYIIGISLHATKTKTFKELMVATRGPRAGAAVNGIILALGLCLGLLYADFVGDLFATLLR--GWLPAWAAQRQVVILILTATVLGPLCLQRDLNALRHSS 828 L K +G+G+L++P MAAG+GTG+ PA +++ S L +++T + + T + F+EL T G R+ A N +I + + L+Y+ F+G+ F+ LL LP+ A R IL LT+ VL PLC+ R + AL +S Sbjct: 2 LTKNSVGSGLLSIPAAMAAGRGTGMGPALVMLVASYLLNSFTMVALARCIQETGARNFRELWEFTLGRRSAWAANTMICLMNFGVLLMYSCFIGETFSRLLLLVPGLPSTLAGRTPAILGLTSVVLFPLCMVRKMAALSITS 143
BLAST of mRNA_H-akashiwo_Contig958.1.1 vs. uniprot
Match: A0A6H5JLR1_9PHAE (Aa_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JLR1_9PHAE) HSP 1 Score: 79.7 bits (195), Expect = 4.090e-13 Identity = 55/150 (36.67%), Postives = 90/150 (60.00%), Query Frame = 1 Query: 388 MTAAIFSLAKVLIGAGMLALPGGMAAGKGT--GLIPAAIIMAFSALASAYTFYIIGISLHATKTKTFKELMVATRGPRAGAAVNGIILALGLCLGLLYADFVGDLFATLLRGW-LPAWAAQRQVVILILTATVLGPLCLQRDLNALRHSS 828 M+A++F+LAK ++GAGML+LP G+AA + +IPA++I+A SAYTF +IG S T +++++ T G R+ G +A L + +GD F+ L + + PA A+R +I+ ++ATVL PL L ++L +L +S Sbjct: 100 MSASVFNLAKNILGAGMLSLPNGVAAFSDSKKAIIPASLIIAVLGAVSAYTFVLIGRSCAETNAESYEQSWARTVGQRSAWVPAGACVATCFAGCLAFTIIIGDSFSALAKTFGAPALVAKRSNIIMAVSATVLLPLSLLKNLKSLGFTS 249
BLAST of mRNA_H-akashiwo_Contig958.1.1 vs. uniprot
Match: A0A836CMH1_9STRA (Transmembrane amino acid transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMH1_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 1.960e-12 Identity = 51/147 (34.69%), Postives = 84/147 (57.14%), Query Frame = 1 Query: 400 IFSLAKVLIGAGMLALPGGMAA---GKGTGLIPAAIIMAFSALASAYTFYIIGISLHATKTKTFKELMVATRGPRAGAAVNGIILALGLCLGLLYADFVGDLFATLLRGWL-PAWAAQRQVVILILTATVLGPLCLQRDLNALRHSS 828 IF+L K ++G+G+LALPGG+AA +G ++PA++++ L S Y F +IG + AT +++ + AT P+ ++A L Y+ +GD FA L + + PAW A R ++ ++ L PLCL DL+ LR++S Sbjct: 33 IFNLVKNIVGSGILALPGGVAAFSHARGA-VVPASVLILLLGLLSGYCFSLIGRACAATNARSYGDAWAATVEPKTVWMPLSSVVAKTFFTCLSYSIIIGDTFAALAQTFAAPAWLAYRPTILSAISGVFLLPLCLMTDLSPLRYTS 178 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig958.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig958.1.1 >prot_H-akashiwo_Contig958.1.1 ID=prot_H-akashiwo_Contig958.1.1|Name=mRNA_H-akashiwo_Contig958.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=236bp MLQQGQTRNYYAGQVADEVNQVHRGGEIELGTAPYGGDISNSQQYSSYGTback to top mRNA from alignment at H-akashiwo_Contig958:79122..81007- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig958.1.1 ID=mRNA_H-akashiwo_Contig958.1.1|Name=mRNA_H-akashiwo_Contig958.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1886bp|location=Sequence derived from alignment at H-akashiwo_Contig958:79122..81007- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig958:79122..81007- >mRNA_H-akashiwo_Contig958.1.1 ID=mRNA_H-akashiwo_Contig958.1.1|Name=mRNA_H-akashiwo_Contig958.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=708bp|location=Sequence derived from alignment at H-akashiwo_Contig958:79122..81007- (Heterosigma akashiwo CCMP452)back to top |