mRNA_H-akashiwo_Contig955.3.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig955.3.1 vs. uniprot
Match: A0A6S9GSP2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GSP2_HETAK) HSP 1 Score: 434 bits (1115), Expect = 9.210e-151 Identity = 224/225 (99.56%), Postives = 225/225 (100.00%), Query Frame = 3 Query: 3 RIVFVAVLAVLFLAVTDAFLPSAQRLSVVRNESNVQMKGYVPDGLSAEQYAKIKKEEAEKLKNLGKVGPNRFKSRSFADWHAAGGKHLFPVDPRKVKSGEIAIEDVPYMQRKGAWDNSDLKGNKNVRDKNKLNVQKTKSEIEYEKGGFRKEQSVSIFGGRNMPWTQKYEAMDVDLAIKGKGPKVRSKLDGGVSKEELDKMREELKKKPTVSRRRSPLDNLFGKKK 677 RIVFVAVLAVLFLAVTDAFLPSAQRLSVVRNESNVQMKGYVPDGLSAEQYAKIKKEEAEKLKNLGKVGPNRFKSRSFADWHAAGGKHLFPVDPRKVKSGEIAIEDVPYMQRKGAWDNSDLKGNKNVRDKNKLNVQKTKSE+EYEKGGFRKEQSVSIFGGRNMPWTQKYEAMDVDLAIKGKGPKVRSKLDGGVSKEELDKMREELKKKPTVSRRRSPLDNLFGKKK Sbjct: 3 RIVFVAVLAVLFLAVTDAFLPSAQRLSVVRNESNVQMKGYVPDGLSAEQYAKIKKEEAEKLKNLGKVGPNRFKSRSFADWHAAGGKHLFPVDPRKVKSGEIAIEDVPYMQRKGAWDNSDLKGNKNVRDKNKLNVQKTKSEVEYEKGGFRKEQSVSIFGGRNMPWTQKYEAMDVDLAIKGKGPKVRSKLDGGVSKEELDKMREELKKKPTVSRRRSPLDNLFGKKK 227
BLAST of mRNA_H-akashiwo_Contig955.3.1 vs. uniprot
Match: A0A7S2US33_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2US33_9STRA) HSP 1 Score: 173 bits (439), Expect = 1.150e-48 Identity = 99/166 (59.64%), Postives = 123/166 (74.10%), Query Frame = 3 Query: 39 LAVTDAFLPSAQR-LSVVRNESNVQMKGYVPDGLSAEQYAKIKKEEAEKLK-NLGKVGPNRFKSRSFADWHAAGGKHLFPVDPRKVKSGEIAIEDVPYMQRKGAWDNSDL--KGNKNVRDKNKLNVQKTKSEIEYEKGGFRKEQSVSIFGGRNMPWTQKYEAMDVD 524 L + AF+P+A LS VR + ++M GYVP+GL+ EQ+ KI +E +K K NLG++GP RFKSRSFA W AAGGKHLFPVDP+KVK+GEIA++DVPYMQR GAWDNSDL KG K + V+ + + +Y GGFRKEQSVSIFGG +MPWTQ Y+ MD D Sbjct: 15 LGIAQAFIPNAGLGLSPVRTCTPLRM-GYVPEGLTPEQWKKI--QEKDKAKGNLGEMGPKRFKSRSFAAWQAAGGKHLFPVDPKKVKTGEIAMKDVPYMQRGGAWDNSDLIKKGEKAPK------VEWSDRDKQYAAGGFRKEQSVSIFGGVSMPWTQGYKKMDKD 171
BLAST of mRNA_H-akashiwo_Contig955.3.1 vs. uniprot
Match: D7G4S4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4S4_ECTSI) HSP 1 Score: 143 bits (361), Expect = 8.440e-37 Identity = 86/179 (48.04%), Postives = 112/179 (62.57%), Query Frame = 3 Query: 54 AFLPSAQRLSVV--RNESNVQMKG-YVPDGLSAEQYAKIKKEEAEKLKNLGKVGPNRFKSRSFADWHAAGGKHLFPVDPRKVKSGEIAIEDVPYMQRKGAWDNSDLKGNKNV------RDKNKLNVQKTK---------SEIEYEKGGFRKEQSVSIFGGRNMPWT----QKYEAMDVD 524 AF P + L V R+ S+ +K Y+PDGLS ++ KIK + +K +NLGK+GP+RFKSRSF W +G HLFPVDP+KVKSGEI ++ VPYMQR GAWDNSDL K +DK LN + +K ++ Y GG++KEQSVSIFGG +PW QK ++VD Sbjct: 20 AFAPPSAPLRPVTTRSSSSAALKMVYIPDGLSPAEWKKIKDADKKKQENLGKLGPSRFKSRSFQAWQESGAGHLFPVDPKKVKSGEIPMDKVPYMQRGGAWDNSDLTSKKGQAAMRARKDKVVLNNKVSKGVKQKAWSSTDKAYAAGGYKKEQSVSIFGGTPLPWVSGAAQKSPGVEVD 198
BLAST of mRNA_H-akashiwo_Contig955.3.1 vs. uniprot
Match: A0A835ZE56_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE56_9STRA) HSP 1 Score: 125 bits (313), Expect = 5.240e-30 Identity = 77/158 (48.73%), Postives = 98/158 (62.03%), Query Frame = 3 Query: 48 TDAFLPSAQRLSVVRNESNVQMKGYVPDGLSAEQYAKIK-KEEAEKLKNLGKVGPNRFKSRSFADWHAA----GGKHLFPVDPRKVKSGEIAIEDVPYMQRKGAWDNSDLKGNKNVRDKNKLNVQK---TKSEIEYEKGGFRKEQSVSIFG-GRNMPW 494 T AF P A S + V M+ Y+PDGL+ Q+ IK KE+A+ KNLG+VG FKSRSF W A G HLFPVDPRKVK+GEI + +VPYMQR+G+WD+ DL K + +QK T ++ Y GG R +QSV+IFG G N+PW Sbjct: 21 TLAFAPGAALPSCATSTCQVTMR-YIPDGLTQAQWDAIKEKEQAKASKNLGRVGATSFKSRSFQAWQQAMENGEGGHLFPVDPRKVKTGEIKLSEVPYMQRRGSWDDEDLL-------KKEKGIQKKAWTPTDKAYADGGERAQQSVNIFGTGANLPW 170
BLAST of mRNA_H-akashiwo_Contig955.3.1 vs. uniprot
Match: A0A7S1D0M1_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D0M1_CYCTE) HSP 1 Score: 119 bits (299), Expect = 2.750e-28 Identity = 79/170 (46.47%), Postives = 97/170 (57.06%), Query Frame = 3 Query: 69 AQRLSVVRNESNVQMKGYVPDGLSAEQYAKIKKEEAEKLK--NLGKVGPNRFKSRSFADWHAA----GGKHLFPV--DPRKVKSGEIAIEDVPYMQRKGAWDNSDLKGNKNVRDKNKLNVQKTKSEIEYEKGGFRKEQSVSIFG-GRNMPWTQKYEAMDVDLAIKGKGPK 551 A RL+ VR + V GYVP G + EQY K K+EE +K++ NLG++GP F+SRSF + A KHL PV KV GEI EDVPYMQR G+WDNSD+KG K R S+ Y GG++KEQSVSIFG G + WT K +I G PK Sbjct: 45 APRLNAVRLSTAVH--GYVPSGFTPEQYKKFKEEEKKKMQKQNLGRLGPKGFQSRSFQSFQEALERGEAKHLLPVFNAKEKVARGEIRPEDVPYMQRGGSWDNSDVKGAKKKR--------WLSSDKSYADGGYKKEQSVSIFGYGEGLDWTGKNARTGPSESIPGAAPK 204
BLAST of mRNA_H-akashiwo_Contig955.3.1 vs. uniprot
Match: A0A1Z5KB69_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KB69_FISSO) HSP 1 Score: 118 bits (295), Expect = 1.090e-27 Identity = 74/154 (48.05%), Postives = 90/154 (58.44%), Query Frame = 3 Query: 117 GYVPDGLSAEQYAKIKKEEAEK--LKNLGKVGPNRFKSRSFADWHAA----GGKHLFPVDPRK--VKSGEIAIEDVPYMQRKGAWDNSDLKGNKNVRDKNKLNVQKTKSEIEYEKGGFRKEQSVSIFG-GRNMPWTQKYEAMDVDLAIKGKGPK 551 GYVPDG + E Y K K+EE +K KNLG+VGP FKSRSF + A HL PV K VK GE+ ED+PYMQR G+WDNSD+KG K VR +S+ EY GG+ KEQSVSIFG G+ + WT ++ G PK Sbjct: 37 GYVPDGFTPESYKKFKEEERKKNEKKNLGRVGPKGFKSRSFQSFQEALERGEATHLLPVMNAKERVKKGELKWEDIPYMQRGGSWDNSDVKGAKKVR--------WLQSDKEYANGGYLKEQSVSIFGYGQGLDWTGTRSRSGPAESVPGAAPK 182
BLAST of mRNA_H-akashiwo_Contig955.3.1 vs. uniprot
Match: A0A8J5XDF9_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XDF9_DIALT) HSP 1 Score: 117 bits (292), Expect = 3.270e-27 Identity = 74/151 (49.01%), Postives = 93/151 (61.59%), Query Frame = 3 Query: 63 PSAQRLSV-VRNESNVQMKGYVPDGLSAEQYAKIKKEEAEKLKNLGKVGPNRFKSRSFADWHAA----GGKHLFPVDPRKVKSGEIAIEDVPYMQRK-GAWDNSDLKGNKNVRDKNKLNVQKTKSEIEYEKGGFRKEQSVSIFGGRNMPWT 497 P A RL+ S V M GYVPDGL+AE+Y KIK+ E + KNLG G NRF+SRS + A HLFPVDP+KVK+G I +EDVPYMQR+ G WD SD+KG + ++ + YE GG + SVSIFGG ++PWT Sbjct: 18 PCAPRLAARAAGLSRVAM-GYVPDGLTAEEYKKIKEREKAQ-KNLGASGTNRFQSRSMYAFQKALESGEAAHLFPVDPKKVKAGAIKLEDVPYMQRRDGRWDQSDVKG--------AAKRKWSRWDKAYENGGRAQSTSVSIFGGASLPWT 158
BLAST of mRNA_H-akashiwo_Contig955.3.1 vs. uniprot
Match: A0A6U3BRN0_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A6U3BRN0_9STRA) HSP 1 Score: 116 bits (291), Expect = 3.900e-27 Identity = 80/189 (42.33%), Postives = 105/189 (55.56%), Query Frame = 3 Query: 15 VAVLAVLFLAVT-DAFLPSAQRLSVVRNESNVQMKGYVPDGLSAEQYAKIKKEEAEKLK--NLGKVGPNRFKSRSFADWHAA----GGKHLFPVDPRK--VKSGEIAIEDVPYMQRKGAWDNSDLKGNKNVRDKNKLNVQKTKSEIEYEKGGFRKEQSVSIFG-GRNMPWTQKYEAMDVDLAIKGKGPK 551 + VL++L A T +AF S Q + + + YVPDG + E Y K K+ EA+KL+ NLGK+GP FKSRSF + A HL PV K VK GE+ ED+PYMQR G+WDNSD+K KN + + S+ EY GG++KEQSVS+ G G + WT K +KG PK Sbjct: 3 ITVLSLLLAASTVNAFTSSTQ--APATRDGLTRAYAYVPDGFTPESYKKFKEAEAKKLQKQNLGKLGPKGFKSRSFQSFQEALERGEADHLMPVFNAKERVKKGELRTEDIPYMQRGGSWDNSDVKNAKNKK-------RWLSSDKEYANGGYKKEQSVSVLGFGSGLDWTGKGARTGPSETVKGAAPK 182
BLAST of mRNA_H-akashiwo_Contig955.3.1 vs. uniprot
Match: B7FS70_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FS70_PHATC) HSP 1 Score: 114 bits (286), Expect = 8.340e-27 Identity = 73/167 (43.71%), Postives = 96/167 (57.49%), Query Frame = 3 Query: 24 LAVLFLAVTDAFLPSAQRLSVVRNESNVQMKGYVPDGLSAEQYAKIKKEEAEKLKN--LGKVGPNRFKSRSFADW-----HAAGGKHLFPVDPR-KVKSGEIAIEDVPYMQRKGAWDNSDLKGNKNVRDKNKLNVQKTKSEIEYEKGGFRKEQSVSIFG-GRNMPWT 497 LAV+FL+ AF P + + ++ E GYVPDGL+ +QY KIK ++A K K LG++GP FKSRS W H G P+D + +VK G + EDVPYM R G WDNSD+KG K + Q +K + +Y KGG++KEQS SI G G WT Sbjct: 10 LAVVFLSAATAFAPGFVKHTAMKLEM-----GYVPDGLTEDQYRKIKMDDARKAKGKELGRLGPKGFKSRSLQSWQEAFDHGKAGHTFAPIDYKERVKQGLMKKEDVPYMVRGGNWDNSDVKGAKKL--------QWSKKDKDYAKGGYKKEQSASILGSGPGFDWT 163
BLAST of mRNA_H-akashiwo_Contig955.3.1 vs. uniprot
Match: A0A836CGF0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGF0_9STRA) HSP 1 Score: 115 bits (289), Expect = 1.440e-26 Identity = 73/154 (47.40%), Postives = 92/154 (59.74%), Query Frame = 3 Query: 57 FLPSAQR-LSVVRNESNVQMKGYVPDGLSAEQYAKIKKEEAEKL-KNLGKVGPNRFKSRSFADWHAA----GGKHLFPVDPRKVKSGEIAIEDVPYMQRKGAWDNSDL-KGNKNVRDKNKLNVQKTKSEIEYEKGGFRKEQSVSIFG-GRNMPW 494 F PSA ++ R ++ Y+PDGL+ EQ+ IK++E EK KNLG+VG FKSRSF W A G HLFPVDP KVK GEI + VPYMQR G+WD+ DL K K ++ K + K Y GG R QS++IFG G N+PW Sbjct: 20 FAPSAALPAALARPATSSLSMAYIPDGLTPEQWKVIKEKEQEKASKNLGRVGATSFKSRSFQAWQEAMERGEGGHLFPVDPVKVKRGEIPLSKVPYMQRGGSWDDEDLVKKEKGIKKKEWSPLDKA-----YATGGERANQSINIFGRGANLPW 168 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig955.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig955.3.1 >prot_H-akashiwo_Contig955.3.1 ID=prot_H-akashiwo_Contig955.3.1|Name=mRNA_H-akashiwo_Contig955.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=190bp MKGYVPDGLSAEQYAKIKKEEAEKLKNLGKVGPNRFKSRSFADWHAAGGKback to top mRNA from alignment at H-akashiwo_Contig955:427250..428413+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig955.3.1 ID=mRNA_H-akashiwo_Contig955.3.1|Name=mRNA_H-akashiwo_Contig955.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1164bp|location=Sequence derived from alignment at H-akashiwo_Contig955:427250..428413+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig955:427250..428413+ >mRNA_H-akashiwo_Contig955.3.1 ID=mRNA_H-akashiwo_Contig955.3.1|Name=mRNA_H-akashiwo_Contig955.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=570bp|location=Sequence derived from alignment at H-akashiwo_Contig955:427250..428413+ (Heterosigma akashiwo CCMP452)back to top |