mRNA_H-akashiwo_Contig954.1.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig954.1.1 vs. uniprot
Match: A0A7S3XVA0_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVA0_HETAK) HSP 1 Score: 267 bits (682), Expect = 3.760e-84 Identity = 154/344 (44.77%), Postives = 182/344 (52.91%), Query Frame = 1 Query: 1 MVDELLKQGVIEESSSEFNAPIVLVQKKTGDLRMCLDLRCLNQITKKAKFPLPTTREI----------------------------------------------------------------------------------------------------------------------------------EGIKPDPKKIEAVKGMRRPASKKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPKGVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETDHGRKPVAYASRVCSSTEANYSATELECLGVIYAVQQFRCYILG 642 + ++LLKQGVI ESSS FNAPIV+V KK+G+ RMCLDLR LN IT +KFPLPT RE+ EG+KPDPKKIEAV+ +RRP SKK QVRQ LGLASYYRQFV F+ IA PLY+LTKD PKGV W DDCEW++Q +KD L S P+L+YPR+D+PFIVETDAS GLGA+L Q+T G +P+AYASR+CS TEANYSATELECLGVIYA+QQFRCY++G Sbjct: 116 ITEDLLKQGVISESSSNFNAPIVMVAKKSGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREGLKPDPKKIEAVRKLRRPESKK-QVRQLLGLASYYRQFVPNFASIAAPLYKLTKDKPKGVLWDDDCEWAFQEIKDSLTSAPVLMYPRWDKPFIVETDASKTGLGAILLQQTQRGTRPIAYASRLCSPTEANYSATELECLGVIYALQQFRCYVMG 458
BLAST of mRNA_H-akashiwo_Contig954.1.1 vs. uniprot
Match: A0A7S3XV63_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV63_HETAK) HSP 1 Score: 267 bits (682), Expect = 3.290e-82 Identity = 154/344 (44.77%), Postives = 182/344 (52.91%), Query Frame = 1 Query: 1 MVDELLKQGVIEESSSEFNAPIVLVQKKTGDLRMCLDLRCLNQITKKAKFPLPTTREI----------------------------------------------------------------------------------------------------------------------------------EGIKPDPKKIEAVKGMRRPASKKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPKGVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETDHGRKPVAYASRVCSSTEANYSATELECLGVIYAVQQFRCYILG 642 + ++LLKQGVI ESSS FNAPIV+V KK+G+ RMCLDLR LN IT +KFPLPT RE+ EG+KPDPKKIEAV+ +RRP SKK QVRQ LGLASYYRQFV F+ IA PLY+LTKD PKGV W DDCEW++Q +KD L S P+L+YPR+D+PFIVETDAS GLGA+L Q+T G +P+AYASR+CS TEANYSATELECLGVIYA+QQFRCY++G Sbjct: 116 ITEDLLKQGVISESSSNFNAPIVMVAKKSGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREGLKPDPKKIEAVRKLRRPESKK-QVRQLLGLASYYRQFVPNFASIAAPLYKLTKDKPKGVLWDDDCEWAFQEIKDSLTSAPVLMYPRWDKPFIVETDASKTGLGAILLQQTQRGTRPIAYASRLCSPTEANYSATELECLGVIYALQQFRCYVMG 458
BLAST of mRNA_H-akashiwo_Contig954.1.1 vs. uniprot
Match: A0A7S3XU57_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU57_HETAK) HSP 1 Score: 236 bits (601), Expect = 3.800e-74 Identity = 113/156 (72.44%), Postives = 131/156 (83.97%), Query Frame = 1 Query: 175 EGIKPDPKKIEAVKGMRRPASKKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPKGVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETDHGRKPVAYASRVCSSTEANYSATELECLGVIYAVQQFRCYILG 642 EG+KPDPKKIEA+K ++RP +KK QVRQ LGLASYYRQFV F+ A PLY LTK PKGVEWTDDCEW++Q LKD L + PILI+P F++ F +ETDAS GLGA+LSQ+T GRKPVAYASRVC+S EANYSATELECLGVI+ +QQFRCYILG Sbjct: 166 EGLKPDPKKIEAIKKLQRPQTKK-QVRQVLGLASYYRQFVPNFAATAAPLYTLTKKEPKGVEWTDDCEWAFQNLKDTLTTAPILIFPNFNKEFTIETDASKHGLGAILSQDTTEGRKPVAYASRVCNSAEANYSATELECLGVIFGIQQFRCYILG 320
BLAST of mRNA_H-akashiwo_Contig954.1.1 vs. uniprot
Match: A0A5C6NL01_9TELE (Retrovirus-related Pol polyprotein from transposon opus (Fragment) n=1 Tax=Takifugu flavidus TaxID=433684 RepID=A0A5C6NL01_9TELE) HSP 1 Score: 192 bits (487), Expect = 9.550e-53 Identity = 119/257 (46.30%), Postives = 154/257 (59.92%), Query Frame = 1 Query: 4 VDELLKQGVIEESSSEFNAPIVLVQKKTGDLRMCLDLRCLNQITKKAKFPLPTTREI-----------------------------EGIKPDPKKIEAVKGMRRPASKKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPK-----------GVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETDHGRKPVAYASRVCSSTE---ANYSATELECLGVIYAV-QQFRCYILG 642 +++LL+ VI ESSS + +PIVLV+KK G LR+C+D R LN T+K FPLP E +G+ DPKKIEAV G + P ++R FLG ASYYR+FV+GF+++AKPL+QL D G WT +CE S+ LK +LVSTP+L Y F RPFI+ETDAS GLGAVLSQETD +PVAYASR TE +NYS+ +LE L + +AV ++FR Y+LG Sbjct: 572 INQLLESQVICESSSPYASPIVLVRKKDGGLRLCVDYRLLNSKTRKDAFPLPHIEESLDALSGAAGFPLLTLPVGAVSYLGHIISSQGVSTDPKKIEAVAGWQCPRHIS-ELRSFLGFASYYRRFVDGFAKMAKPLHQLVADLAGTKTKRGSGRALGSAWTPECEESFNALKSRLVSTPVLAYADFSRPFILETDASHSGLGAVLSQETDGCVRPVAYASRGLRPTERNMSNYSSMKLEFLALKWAVTEKFREYLLG 827
BLAST of mRNA_H-akashiwo_Contig954.1.1 vs. uniprot
Match: A0A4Y2UJM5_ARAVE (Retrovirus-related Pol polyprotein from transposon 297 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2UJM5_ARAVE) HSP 1 Score: 167 bits (422), Expect = 1.440e-45 Identity = 92/215 (42.79%), Postives = 134/215 (62.33%), Query Frame = 1 Query: 1 MVDELLKQGVIEESSSEFNAPIVLVQKKTGDLRMCLDLRCLNQITKKAKFP-LPTTREIEGIKPDPKKIEAVKGMRRPASKKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPKGVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETDHGRKPVAYASRVCSSTEANYSATELECLGVIYAVQQFRCYILG 642 +V ++ G+IEESS + +PIVLV+KK G R C+D R LN+ITKK + L E +K DP KI+AV RP + +R FLGL +YYR FV+ FS I++ L++LT + T++CE S+ +LK L S+PIL YPR D+ FI++TDAS +G+GAVLSQ ++ + +AY S+ E NY T E L ++ +++ F Y+ G Sbjct: 156 LVKGMVDNGIIEESSGPWASPIVLVKKKDGSTRFCVDYRKLNEITKKTEVTNLGHVISAERVKTDPGKIKAVVDWPRPETVH-DLRSFLGLCTYYRCFVKNFSTISRTLHKLT-EAKSNFNCTEECEKSFNSLKQALTSSPILTYPRTDKDFILDTDASNEGIGAVLSQNIENEERVIAYFSKSLGKPERNYCVTRKELLSIVKSIEHFHHYLYG 368
BLAST of mRNA_H-akashiwo_Contig954.1.1 vs. uniprot
Match: A0A5C6N0M9_9TELE (Ribonuclease H n=1 Tax=Takifugu flavidus TaxID=433684 RepID=A0A5C6N0M9_9TELE) HSP 1 Score: 168 bits (425), Expect = 1.040e-44 Identity = 119/324 (36.73%), Postives = 154/324 (47.53%), Query Frame = 1 Query: 4 VDELLKQGVIEESSSEFNAPIVLVQKKTGDLRMCLDLRCLNQITKKAKFPLPTTREI------------------------------------------------------------------------------------------------EGIKPDPKKIEAVKGMRRPASKKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPK-----------GVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETDHGRKPVAYASRVCSSTE---ANYSATELECLGVIYAV-QQFRCYILG 642 +++LL+ VI ESSS + +PIVLV+KK G LR+C+D R LN T+K FPLP E +G+ DPKKIEAV G +RP ++R FLG ASYYR+FV+GF+++AKPL+QL D G WT +CE S+ LK +LVSTP+L Y F RPFI+ETD S GLGAVLSQETD +PVAYASR TE +NYS+ +LE L + +AV ++FR Y+LG Sbjct: 239 INQLLESQVICESSSPYASPIVLVRKKDGGLRLCVDYRLLNSKTRKDAFPLPRIEESLDALSGARWFSTLDLASGYNQVPVAEQDRPKTAFCTPFGLFEFNRMPFGLCNAPSTFQRLMQRMFGDQQGQGLKVKAEKCAIFQEQVSYLGHIISSQGVSTDPKKIEAVAGWQRPRHIS-ELRSFLGFASYYRRFVDGFAKMAKPLHQLVADLAGTKTKRGSGRALGSAWTPECEESFNALKSRLVSTPVLAYADFSRPFILETDTSHSGLGAVLSQETDGCVRPVAYASRGLRPTERNMSNYSSMKLEFLALKWAVTEKFREYLLG 561
BLAST of mRNA_H-akashiwo_Contig954.1.1 vs. uniprot
Match: A0A814M118_9BILA (Hypothetical protein n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A814M118_9BILA) HSP 1 Score: 167 bits (424), Expect = 2.840e-44 Identity = 99/250 (39.60%), Postives = 141/250 (56.40%), Query Frame = 1 Query: 1 MVDELLKQGVIEESSSEFNAPIVLVQKKTGDLRMCLDLRCLNQITKKAKFPLPTTREI-------------------------------------EGIKPDPKKIEAVKGMRRPASKKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPKGVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQ-ETDHGRKPVAYASRVCSSTEANYSATELECLGVIYAVQQFRCYI 636 MVD++LKQ VI +S S + +P+VLV+KK G R C+D R LN +T K +PLP E +GIKP+ KI+ VK P +++ +V++FLG ASYYR+F+ FS +A P+ +L K K EWT CE S++ + + L + P+L YP F +PF + TDASG G+ VL Q + + K +AYASR +E NY A ELECL +++AV+QFR Y+ Sbjct: 423 MVDDMLKQKVISKSKSPWASPVVLVKKKDGTERFCVDFRKLNSVTIKDNYPLPLIDETIDKLRNAKFYSTMDLASGYWQMALDDESKEKTAFITHKGIKPNEDKIKVVKNYPTPENQR-EVKRFLGFASYYRKFIRDFSSLADPINRLLKKDTK-FEWTRLCEESFRKIIEHLTNPPLLAYPDFSKPFHLATDASGVGIAGVLFQYDEQNNEKVIAYASRNLRPSERNYPAIELECLAIVWAVEQFRPYL 670
BLAST of mRNA_H-akashiwo_Contig954.1.1 vs. uniprot
Match: A0A8M1HLT4_BETSP (uncharacterized mitochondrial protein AtMg00860-like n=1 Tax=Betta splendens TaxID=158456 RepID=A0A8M1HLT4_BETSP) HSP 1 Score: 155 bits (391), Expect = 9.770e-44 Identity = 86/160 (53.75%), Postives = 114/160 (71.25%), Query Frame = 1 Query: 175 EGIKPDPKKIEAVKGMRRPASKKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPKGVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETDHGRKPVAYASRVCSSTEAN---YSATELECLGVIYAV-QQFRCYILG 642 +G+ DPKK+EAV G RRP + ++R FLG ASYYR+FVEGF+++A PL+++ + + +WT CE S++ LK KLVS P+L Y F RPFI+E DAS GLGAVLSQETD G KPVAYASR TE N YS+ +LE L + +A+ ++FR Y+LG Sbjct: 37 QGVSTDPKKVEAVAGWRRP-QQVSELRTFLGFASYYRRFVEGFAKLAGPLHRVVAELTES-KWTPQCEQSFEALKAKLVSAPVLAYADFGRPFILEIDASHDGLGAVLSQETDSGVKPVAYASRGLRPTERNMDNYSSMKLEFLALKWAMTEKFREYLLG 194
BLAST of mRNA_H-akashiwo_Contig954.1.1 vs. uniprot
Match: A0A4Y2F4W6_ARAVE (Retrovirus-related Pol polyprotein from transposon 297 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2F4W6_ARAVE) HSP 1 Score: 159 bits (401), Expect = 2.270e-43 Identity = 97/269 (36.06%), Postives = 140/269 (52.04%), Query Frame = 1 Query: 1 MVDELLKQGVIEESSSEFNAPIVLVQKKTGDLRMCLDLRCLNQITKKAKFPLP---------------TTREI----------------------------------------EGIKPDPKKIEAVKGMRRPASKKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPKGVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETDHGRKPVAYASRVCSSTEANYSATELECLGVIYAVQQFRCYILG 642 +V E++ G+IEESS + +PIVLV+KK G R C+D R LN+IT K +PLP TT ++ E +K DP KI+AV RP + +R FLGL + YR+FV+ S IA+PL++LT + WT++CE S+ +LK L S+PIL YPR D+ FI++TDAS +G+GAVLSQ + + +AY S+ E NY T E L ++ +++ F Y+ G Sbjct: 32 IVKEMVDNGIIEESSGPWASPIVLVKKKDGSTRFCVDYRKLNEITIKDSYPLPRIDDNLDALNGSKCFTTLDLKSGYWQVEVRPEDREKTAFTTGQGLWQFKEVTYLGHVISAEEVKTDPGKIKAVVDWPRPETVH-DLRSFLGLCTNYRRFVKNVSTIARPLHKLT-EAKSNFTWTEECEKSFNSLKQALTSSPILTYPRTDKEFILDTDASNEGIGAVLSQNIGNEERVIAYFSKTLGKPERNYCVTHKELLAIVKSIEHFHHYLYG 298
BLAST of mRNA_H-akashiwo_Contig954.1.1 vs. uniprot
Match: A0A1B6LP54_9HEMI (RNA-directed DNA polymerase n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6LP54_9HEMI) HSP 1 Score: 165 bits (417), Expect = 2.420e-43 Identity = 82/156 (52.56%), Postives = 113/156 (72.44%), Query Frame = 1 Query: 175 EGIKPDPKKIEAVKGMRRPASKKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKDTPKGVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETDHGRKPVAYASRVCSSTEANYSATELECLGVIYAVQQFRCYILG 642 EG++P KK+EA+ RP S + +VR FLGL+ YYR ++ F++IAKPL QLTK + WTD+CE ++++LK+KL+S PIL+YP F +PF++ TDAS GLGA+L+ D P+ YASR +S+E NYSATELE L VI+AV+ FRCY+ G Sbjct: 451 EGVRPLKKKVEAIHNYPRPQSVR-EVRGFLGLSGYYRTHIKNFADIAKPLTQLTKGN-QSFNWTDECEQAFKSLKEKLMSEPILVYPDFSKPFLLSTDASSVGLGAILANVIDGQEHPICYASRQLNSSERNYSATELEMLAVIWAVKYFRCYLTG 604 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig954.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig954.1.1 >prot_H-akashiwo_Contig954.1.1 ID=prot_H-akashiwo_Contig954.1.1|Name=mRNA_H-akashiwo_Contig954.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=214bp MVDELLKQGVIEESSSEFNAPIVLVQKKTGDLRMCLDLRCLNQITKKAKFback to top mRNA from alignment at H-akashiwo_Contig954:124484..125514+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig954.1.1 ID=mRNA_H-akashiwo_Contig954.1.1|Name=mRNA_H-akashiwo_Contig954.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1031bp|location=Sequence derived from alignment at H-akashiwo_Contig954:124484..125514+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig954:124484..125514+ >mRNA_H-akashiwo_Contig954.1.1 ID=mRNA_H-akashiwo_Contig954.1.1|Name=mRNA_H-akashiwo_Contig954.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=642bp|location=Sequence derived from alignment at H-akashiwo_Contig954:124484..125514+ (Heterosigma akashiwo CCMP452)back to top |