mRNA_H-akashiwo_Contig952.7.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig952.7.1 vs. uniprot
Match: A0A7S3Y6J5_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6J5_HETAK) HSP 1 Score: 187 bits (476), Expect = 2.920e-57 Identity = 87/107 (81.31%), Postives = 94/107 (87.85%), Query Frame = 1 Query: 1 VPGVSEKLRWQLKKLGVDLVFKRGQALGSMICNVKEKRTAERKKGVIYKIPCQHCQECYIGETCRHWGTRKAEHQGYVRRGEADKSGVANHAINMLHRPDWQNSCVV 321 VPGVS+KLR QLK VDLVFKRGQ LGS+I NVKEKRT ER+KGVIYKIPC+HC+ECYIGET RHWGTRK EHQGYVRRGEA KSGVANHA+NMLH PDW+ S VV Sbjct: 144 VPGVSDKLRRQLKGYNVDLVFKRGQTLGSLISNVKEKRTPERQKGVIYKIPCKHCEECYIGETKRHWGTRKGEHQGYVRRGEASKSGVANHAVNMLHHPDWEKSHVV 250
BLAST of mRNA_H-akashiwo_Contig952.7.1 vs. uniprot
Match: A0A7S4DDA1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DDA1_HETAK) HSP 1 Score: 187 bits (476), Expect = 3.070e-54 Identity = 87/107 (81.31%), Postives = 94/107 (87.85%), Query Frame = 1 Query: 1 VPGVSEKLRWQLKKLGVDLVFKRGQALGSMICNVKEKRTAERKKGVIYKIPCQHCQECYIGETCRHWGTRKAEHQGYVRRGEADKSGVANHAINMLHRPDWQNSCVV 321 VPGVS+KLR QLK VDLVFKRGQ LGS+I NVKEKRT ER+KGVIYKIPC+HC+ECYIGET RHWGTRK EHQGYVRRGEA KSGVANHA+NMLH PDW+ S VV Sbjct: 478 VPGVSDKLRRQLKGYNVDLVFKRGQTLGSLISNVKEKRTPERQKGVIYKIPCKHCEECYIGETKRHWGTRKGEHQGYVRRGEASKSGVANHAVNMLHHPDWEKSHVV 584
BLAST of mRNA_H-akashiwo_Contig952.7.1 vs. uniprot
Match: A0A7S3XRK9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRK9_HETAK) HSP 1 Score: 171 bits (433), Expect = 3.240e-51 Identity = 78/80 (97.50%), Postives = 79/80 (98.75%), Query Frame = 1 Query: 1 VPGVSEKLRWQLKKLGVDLVFKRGQALGSMICNVKEKRTAERKKGVIYKIPCQHCQECYIGETCRHWGTRKAEHQGYVRR 240 VPGVSEKLRWQLKKLGVDLVFKRGQ LGSMICNVKEKRTAER+KGVIYKIPCQHCQECYIGETCRHWGTRKAEHQGYVRR Sbjct: 192 VPGVSEKLRWQLKKLGVDLVFKRGQTLGSMICNVKEKRTAERQKGVIYKIPCQHCQECYIGETCRHWGTRKAEHQGYVRR 271
BLAST of mRNA_H-akashiwo_Contig952.7.1 vs. uniprot
Match: A0A3M6TWS2_POCDA (Uncharacterized protein n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6TWS2_POCDA) HSP 1 Score: 70.9 bits (172), Expect = 8.740e-13 Identity = 37/105 (35.24%), Postives = 53/105 (50.48%), Query Frame = 1 Query: 7 GVSEKLRWQLKKLGVDLVFKRGQALGSMICNVKEKRTAERKKGVIYKIPCQHCQECYIGETCRHWGTRKAEHQGYVRRGEADKSGVANHAINMLHRPDWQNSCVV 321 GV+E ++ L V + K Q LG + K+ T E++ IY IPC C YIG+T R +GTR EHQ V G+ + S ++ H H W NS ++ Sbjct: 59 GVTEPIKRILNSHNVKVAQKPFQTLGHIFAKPKDPVTKEQRTDAIYSIPCNDCDNEYIGQTKRQFGTRLKEHQKAVFLGKKENSALSEHTCLTNHTIGWDNSKII 163
BLAST of mRNA_H-akashiwo_Contig952.7.1 vs. uniprot
Match: A0A3L8DPJ0_OOCBI (GIY-YIG domain-containing protein n=2 Tax=Ooceraea biroi TaxID=2015173 RepID=A0A3L8DPJ0_OOCBI) HSP 1 Score: 71.2 bits (173), Expect = 1.230e-12 Identity = 36/101 (35.64%), Postives = 53/101 (52.48%), Query Frame = 1 Query: 1 VPGVSEKLRWQLKKLGVDLVFKRGQALGSMICNVKEKRTAERKKGVIYKIPCQHCQECYIGETCRHWGTRKAEHQGYVRRGEADKSGVANHAINMLHRPDW 303 V VSE ++ L K GV VF L ++ K++ ++ GV+YKI C +C CYIG+T RH TR EH V++ S ++ H ++ H DW Sbjct: 106 VNNVSEMIKKSLNKYGVRTVFSISNKLDDIVKLGKDRLDSKLLSGVVYKIDCNNCSACYIGQTKRHLETRLKEHMANVKKDVDYYSVISKHRVDYGHEFDW 206
BLAST of mRNA_H-akashiwo_Contig952.7.1 vs. uniprot
Match: A0A026WNV3_OOCBI (GIY-YIG domain-containing protein n=1 Tax=Ooceraea biroi TaxID=2015173 RepID=A0A026WNV3_OOCBI) HSP 1 Score: 68.9 bits (167), Expect = 3.560e-12 Identity = 33/107 (30.84%), Postives = 59/107 (55.14%), Query Frame = 1 Query: 1 VPGVSEKLRWQLKKLGVDLVFKRGQALGSMICNVKEKRTAERKKGVIYKIPCQHCQECYIGETCRHWGTRKAEHQGYVRRGEADKSGVANHAINMLHRPDWQNSCVV 321 + G+ E + LK+ +D + + L +I K++ ++ GV+YKI C++C+ CYIG+T RH TR EH+ + + + +S V+ H H DW N+ ++ Sbjct: 44 IKGLCEGIGRVLKRRNIDFAYTVHKRLNCLIKLGKDRLINDQHMGVVYKIECENCEACYIGQTKRHLETRVKEHRSDISKDDNCRSVVSKHRALKDHNFDWCNTKIL 150
BLAST of mRNA_H-akashiwo_Contig952.7.1 vs. uniprot
Match: UPI000F08A409 (uncharacterized protein LOC113561766 n=1 Tax=Ooceraea biroi TaxID=2015173 RepID=UPI000F08A409) HSP 1 Score: 68.9 bits (167), Expect = 1.830e-11 Identity = 33/107 (30.84%), Postives = 59/107 (55.14%), Query Frame = 1 Query: 1 VPGVSEKLRWQLKKLGVDLVFKRGQALGSMICNVKEKRTAERKKGVIYKIPCQHCQECYIGETCRHWGTRKAEHQGYVRRGEADKSGVANHAINMLHRPDWQNSCVV 321 + G+ E + LK+ +D + + L +I K++ ++ GV+YKI C++C+ CYIG+T RH TR EH+ + + + +S V+ H H DW N+ ++ Sbjct: 218 IKGLCEGIGRVLKRRNIDFAYTVHKRLNCLIKLGKDRLINDQHMGVVYKIECENCEACYIGQTKRHLETRVKEHRSDISKDDNCRSVVSKHRALKDHNFDWCNTKIL 324
BLAST of mRNA_H-akashiwo_Contig952.7.1 vs. uniprot
Match: A0A3M6ULI1_POCDA (Ig-like domain-containing protein n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6ULI1_POCDA) HSP 1 Score: 68.9 bits (167), Expect = 2.210e-11 Identity = 37/105 (35.24%), Postives = 52/105 (49.52%), Query Frame = 1 Query: 7 GVSEKLRWQLKKLGVDLVFKRGQALGSMICNVKEKRTAERKKGVIYKIPCQHCQECYIGETCRHWGTRKAEHQGYVRRGEADKSGVANHAINMLHRPDWQNSCVV 321 GV+E ++ L V + K Q LG + K+ T ER+ IY IPC C YIG+T R +GTR EHQ V + + S ++ H H W NS ++ Sbjct: 261 GVTEPIKRILNSHNVKVAQKPFQTLGHIFAKPKDPVTKERRTDAIYSIPCNDCDNEYIGQTKRQFGTRLKEHQKAVFLCKKENSALSEHTCLTNHTIGWDNSKII 365
BLAST of mRNA_H-akashiwo_Contig952.7.1 vs. uniprot
Match: UPI001EDECDC5 (uncharacterized protein LOC124220465 n=1 Tax=Neodiprion pinetum TaxID=441929 RepID=UPI001EDECDC5) HSP 1 Score: 67.4 bits (163), Expect = 6.070e-11 Identity = 33/107 (30.84%), Postives = 53/107 (49.53%), Query Frame = 1 Query: 1 VPGVSEKLRWQLKKLGVDLVFKRGQALGSMICNVKEKRTAERKKGVIYKIPCQHCQECYIGETCRHWGTRKAEHQGYVRRGEADKSGVANHAINMLHRPDWQNSCVV 321 V G+ E L K + V K + SM + K+ + GV+YKIPC HC + YIG+T R TR EH+ + E + + + HAI+ H ++ + ++ Sbjct: 194 VAGLFESLNRTFSKYKIQFVGKGAHDISSMFDSGKDPLPLVNRSGVVYKIPCNHCNKAYIGQTSRQLHTRITEHRRNIHEHEDNCTALTRHAIDFDHSFNYSQASII 300
BLAST of mRNA_H-akashiwo_Contig952.7.1 vs. uniprot
Match: A0A3L8DEX6_OOCBI (Uncharacterized protein n=1 Tax=Ooceraea biroi TaxID=2015173 RepID=A0A3L8DEX6_OOCBI) HSP 1 Score: 65.1 bits (157), Expect = 4.950e-10 Identity = 32/101 (31.68%), Postives = 52/101 (51.49%), Query Frame = 1 Query: 1 VPGVSEKLRWQLKKLGVDLVFKRGQALGSMICNVKEKRTAERKKGVIYKIPCQHCQECYIGETCRHWGTRKAEHQGYVRRGEADKSGVANHAINMLHRPDW 303 V G+SE+LR + + L +I K+ + ++K V+Y+I C C CY+G+T RH R EH+ +++ E D S V+ H ++ H DW Sbjct: 498 VKGISEQLRRIYMSCDLRVACTVFSKLDRLIKLGKDMLSRDKKTNVVYRIKCNACNACYVGQTKRHLSVRIGEHRSNIKKSEGDWSVVSRHRVDNDHDFDW 598 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig952.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig952.7.1 >prot_H-akashiwo_Contig952.7.1 ID=prot_H-akashiwo_Contig952.7.1|Name=mRNA_H-akashiwo_Contig952.7.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=107bp VPGVSEKLRWQLKKLGVDLVFKRGQALGSMICNVKEKRTAERKKGVIYKIback to top mRNA from alignment at H-akashiwo_Contig952:126234..126554+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig952.7.1 ID=mRNA_H-akashiwo_Contig952.7.1|Name=mRNA_H-akashiwo_Contig952.7.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=321bp|location=Sequence derived from alignment at H-akashiwo_Contig952:126234..126554+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig952:126234..126554+ >mRNA_H-akashiwo_Contig952.7.1 ID=mRNA_H-akashiwo_Contig952.7.1|Name=mRNA_H-akashiwo_Contig952.7.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=321bp|location=Sequence derived from alignment at H-akashiwo_Contig952:126234..126554+ (Heterosigma akashiwo CCMP452)back to top |