mRNA_H-akashiwo_Contig952.1.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig952.1.1
Unique NamemRNA_H-akashiwo_Contig952.1.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig952.1.1 vs. uniprot
Match: A0A7S3UX78_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UX78_HETAK)

HSP 1 Score: 181 bits (458), Expect = 5.210e-52
Identity = 92/185 (49.73%), Postives = 117/185 (63.24%), Query Frame = 1
Query:    1 VIYCHANSNDVGMCYKYLDAMRSRLNVHVIAVEYPGYGFKKDQ-LPTEHGVNMAVYQVYDYVRGSLHWPAENITVVGRSIGTGPAVHLASTEEVGALVLISAFSSIMDIVDKHFPI-IGRLVVGEQNHWESKKTIRKVKCPVLFLHGDKDKFIPPQQTSVLFEQCTSDRKQFLYLEGYGHNRLDF 549
            ++YCHANS D+G C K+L A+RS L VHVI VEYPGYG       P+E  +N +V +VY+++   +HWP ENI VVGRSIG+GPA  LA    +G L+LISAF SI  I  K     I  LV+   N +++   IR+V CPVLFLHG +D F+P Q    L+  C S RK    L GYGHN  D+
Sbjct:   43 ILYCHANSTDIGHCRKHLQALRSLLGVHVIGVEYPGYGTTYSSGKPSEDNINESVLKVYNFICKQMHWPPENIIVVGRSIGSGPATKLAREVPLGGLILISAFKSITSIARKFVGAGIANLVIA--NQYDNLTAIRQVHCPVLFLHGSEDDFVPFQHCQDLYNACASSRKTLAPLLGYGHNHFDW 225          
BLAST of mRNA_H-akashiwo_Contig952.1.1 vs. uniprot
Match: A0A7S3XMG0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMG0_HETAK)

HSP 1 Score: 156 bits (395), Expect = 2.970e-43
Identity = 76/179 (42.46%), Postives = 116/179 (64.80%), Query Frame = 1
Query:    1 VIYCHANSNDVGMCYKYLDAMRSRLNVHVIAVEYPGYGFKKDQLPTEHGVNMAVYQVYDYVRGSLHWPAENITVVGRSIGTGPAVHLASTEEVGALVLISAFSSIMDIVDKHFPIIGRLVVGEQ---NHWESKKTIRKVKCPVLFLHGDKDKFIPPQQTSVLFEQCTSDRKQFLYLEGY 528
            +I+CH N+ DVG   + L+ +  +L V+++AVEYPGYG + D+ P++ G++++V +VY Y+R  + WPA NI V+GRSIG+GPA  LAS    GAL+L+S FSSI D++++        VV +    N W + + I +V+CPVL LHG +DK IP   ++ LF  C + R  +L   G+
Sbjct:   40 MIHCHGNATDVGRIRETLELLADQLGVNIVAVEYPGYGCRSDEKPSKAGLDVSVLKVYSYLRNEVGWPACNILVMGRSIGSGPATSLASHNRPGALILVSLFSSIEDLIEQRVGHRATRVVTDVFRVNGWNNLEQISQVECPVLLLHGSQDKIIPCSHSTKLFHLCKNGRISYLPRTGH 218          
BLAST of mRNA_H-akashiwo_Contig952.1.1 vs. uniprot
Match: A0A7S0HWG4_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HWG4_9CRYP)

HSP 1 Score: 148 bits (373), Expect = 3.560e-39
Identity = 79/183 (43.17%), Postives = 105/183 (57.38%), Query Frame = 1
Query:    1 VIYCHANSNDVGMCYKYLDAMRSRLNVHVIAVEYPGYGFKKDQLPTEHGVNMAVYQVYDYVRGSLHWPAENITVVGRSIGTGPAVHLASTEEVGALVLISAFSSIMDIVDKHFPIIGRLVVGE-QNHWESKKTIRKVKCPVLFLHGDKDKFIPPQQTSVLFEQCTSDRKQFLYLEGYGHNRLD 546
            VIYCHAN  DVG+ Y+    +   L VHV+  EYPGYG   D  P E  VN  +   YD+    LHW  + +   GRSIGTGPAV LAS  E G L+L+S ++SI D+V +H  I+   +  E  N + S + I  VKCP L +HG  D+ IP +Q   L  +  S  K+ + LEG GH+ +D
Sbjct:   80 VIYCHANGEDVGVLYEAGHWLCDTLGVHVLIPEYPGYGVAPDS-PNELSVNRNILAAYDFAVKGLHWDPKRVIFFGRSIGTGPAVKLASELECGGLILVSPYTSIKDLVSQHAGIVTSWLTAELANLYPSDECISYVKCPSLIVHGATDRVIPCEQARRLHAKSGSKAKRLVVLEGIGHHGID 261          
BLAST of mRNA_H-akashiwo_Contig952.1.1 vs. uniprot
Match: A0A7S0DSL2_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DSL2_9EUKA)

HSP 1 Score: 142 bits (357), Expect = 4.160e-37
Identity = 71/188 (37.77%), Postives = 107/188 (56.91%), Query Frame = 1
Query:    1 VIYCHANSNDVGMCYKYLDAMRSRLNVHVIAVEYPGYGFKKDQLPTEHGVNMAVYQVYDYVRGSLHWPAENITVVGRSIGTGPAVHLAS------TEEVGALVLISAFSSIMDIVDKHFPIIGRLVVGEQNHWESKKTIRKVKCPVLFLHGDKDKFIPPQQTSVLFEQCTSDRKQFLYLEGYGHNRLD 546
            VIYCH N  D+G  +  L   R    VH++A+EYPGYG  +   P+E  +N A+Y VYD+V   LHWP+  + + GRSIGTGPA HLA       +  VG ++L   ++SI  +V K    +   ++ ++  W++ K ++ + CPVL +HG  DK IP + +  L++ C S  KQ + +    HN  D
Sbjct:   55 VIYCHGNGCDLGKIHDELLRYRDYWKVHILAMEYPGYGLCEGT-PSEASINRALYSVYDFVTRKLHWPSLFVFLYGRSIGTGPACHLARYCNKSPSTRVGGIILQCGYTSIRAVVAKSIGTLASNLITDR--WQNIKAMKYIDCPVLLIHGQGDKLIPYEHSEKLYDACKSQHKQLIVVAEADHNTFD 239          
BLAST of mRNA_H-akashiwo_Contig952.1.1 vs. uniprot
Match: A0A817YUD8_9BILA (Hypothetical protein n=5 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A817YUD8_9BILA)

HSP 1 Score: 139 bits (350), Expect = 4.560e-37
Identity = 66/184 (35.87%), Postives = 106/184 (57.61%), Query Frame = 1
Query:    1 VIYCHANSNDVGMCYKYLDAMRSRLNVHVIAVEYPGYGFKKD--QLPTEHGVNMAVYQVYDYVRGSLHWPAENITVVGRSIGTGPAVHLASTEEVGALVLISAFSSIMDIVDKHFPIIGRLVVGEQNHWESKKTIRKVKCPVLFLHGDKDKFIPPQQTSVLFEQCTS-DRKQFLYLEGYGHNRL 543
            +I+CH N  D+G     L  +  RL  HV+  EYP YG  K     P++  +N    + Y +VR +L WP + I + G SIG+G A HLAST+ VGAL+L SA++SI ++V +   ++ +++ G    W++ + ++++ CP LF+HG +D  IP   +  LF+     D+KQ  +L    HN +
Sbjct:   55 IIWCHGNGCDIGSMDMTLTTLSRRLRAHVLIFEYPAYGLLKGITSSPSQASINNHAERAYSFVRDTLKWPTDRIIIYGHSIGSGAACHLASTQPVGALILQSAYTSISNLVREKIGLLSKIITGP--FWDNCEAMKRITCPTLFIHGQRDTLIPSYHSQRLFDSLNLLDKKQLAFLPNDDHNSI 236          
BLAST of mRNA_H-akashiwo_Contig952.1.1 vs. uniprot
Match: A0A815DS09_9BILA (Hypothetical protein n=3 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A815DS09_9BILA)

HSP 1 Score: 136 bits (342), Expect = 3.030e-36
Identity = 63/183 (34.43%), Postives = 106/183 (57.92%), Query Frame = 1
Query:    1 VIYCHANSNDVGMCYKYLDAMRSRLNVHVIAVEYPGYGFKKDQL-PTEHGVNMAVYQVYDYVRGSLHWPAENITVVGRSIGTGPAVHLASTEEVGALVLISAFSSIMDIVDKHFPIIGRLVVGEQNHWESKKTIRKVKCPVLFLHGDKDKFIPPQQTSVLFEQCT-SDRKQFLYLEGYGHNRL 543
            VI+CH N +D+G     ++ +  R+  HV+A EYP YG  K  + PTE  +N    + Y +VR +L WP++ I + G SIG+GPA HLA+T+ VG L+L S + S+  ++ +   I  +L      +W + + I+ ++CP+LF+HG +D  IP   +  L+     +++K+ + L    HN +
Sbjct:   55 VIWCHGNGDDIGSIDMAMNTLSQRIQAHVMAFEYPSYGLCKRSIEPTEETINNHAERAYSFVRDTLRWPSDRILIYGHSIGSGPACHLAATKAVGGLILKSPYKSLSHLIQEKIWIFSKLF--SIPNWNNLEAIKHIRCPILFIHGQRDNLIPFHHSKALYNSLNHNEKKRLVLLPDDDHNSI 235          
BLAST of mRNA_H-akashiwo_Contig952.1.1 vs. uniprot
Match: A0A7S0N4J5_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0N4J5_9CRYP)

HSP 1 Score: 137 bits (345), Expect = 4.180e-36
Identity = 69/182 (37.91%), Postives = 101/182 (55.49%), Query Frame = 1
Query:    1 VIYCHANSNDVGMCYKYLDAMRSRLNVHVIAVEYPGYGFKKDQLPTEHGVNMAVYQVYDYVRGSLHWPAENITVVGRSIGTGPAVHLASTEEVGALVLISAFSSIMDIVDKHFPIIGRLVVGEQNHWESKKTIRKVKCPVLFLHGDKDKFIPPQQTSVLFEQCTSDRKQFLYLEGYGHNRLD 546
            +IYCHANS D+G  Y     +   + VHV+  EYPGYG      P E  VN AV     + + +L W  ++I + GRSIGTGPA++ A    VG LVL+S +++I DI++ H   +  L+    + W+++  IR V  P+L +HG  D  IP   +  L E C +  K+ + LE  GH  +D
Sbjct:   81 LIYCHANSEDLGSIYPCAQWLCQMMGVHVLVPEYPGYGLCTGN-PCEDTVNRAVLAACTFAKDALRWDLDHILIYGRSIGTGPALNAARLGRVGGLVLVSPYTNIRDIIETHVGSVIALIAAGASDWDNRSMIRNVAVPILLIHGTADDIIPCNHSEELHELCQAP-KRLVLLERVGHQDMD 260          
BLAST of mRNA_H-akashiwo_Contig952.1.1 vs. uniprot
Match: A0A7S0QFG7_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QFG7_9CRYP)

HSP 1 Score: 138 bits (347), Expect = 1.810e-35
Identity = 74/183 (40.44%), Postives = 101/183 (55.19%), Query Frame = 1
Query:    1 VIYCHANSNDVGMCYKYLDAMRSRLNVHVIAVEYPGYGFKKDQLPTEHGVNMAVYQVYDYVRGSLHWPAENITVVGRSIGTGPAVHLASTEEVGALVLISAFSSIMDIVDKHFPIIGRLVVGE-QNHWESKKTIRKVKCPVLFLHGDKDKFIPPQQTSVLFEQCTSDRKQFLYLEGYGHNRLD 546
            VIYCHAN  D+G+ Y+    +   L VHV+  EYPGYG    Q P E  V   +   YD+    L W  E I   GRSIGTGPAV LAS  + G LVL+S F+S+ D+V  H   +   +  E  N + +++ I  VKCP L +HG  D+ I  +Q   L   C +  ++ + LEG GH+ +D
Sbjct:  108 VIYCHANGEDIGVLYEAGHWICDTLGVHVLIPEYPGYGMAPGQ-PNEVSVLRNIQAAYDFAIHGLLWDPERIVFFGRSIGTGPAVALASQLKCGGLVLVSPFTSVKDMVRHHAGAVTSFLTAELSNMFPNQERIANVKCPTLIVHGASDRVISCEQARRLHAACKAKERRLVVLEGIGHHGID 289          
BLAST of mRNA_H-akashiwo_Contig952.1.1 vs. uniprot
Match: A0A0G4IXJ1_PLABS (UBA domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IXJ1_PLABS)

HSP 1 Score: 136 bits (343), Expect = 2.430e-35
Identity = 70/188 (37.23%), Postives = 108/188 (57.45%), Query Frame = 1
Query:    1 VIYCHANSNDVGMCYKYL----DAMRSRLNVHVIAVEYPGYGFKKDQLPTEHGVNMAVYQVYDYVRGSLHWPAENITVVGRSIGTGPAVHLASTEEVGALVLISAFSSIMDIVDKHFPIIGRLVVGEQ--NHWESKKTIRKVKCPVLFLHGDKDKFIPPQQTSVLFEQCTSDRKQFLYLEGYGHNRLD 546
            V++ H N  D+G    +L    +A+ + + + V+AVEYPGYG  K  +  E G   A    + +    L WP  N+ ++G SIGTGPAVHLAS  + G LVL++A+ S+  +       +   ++ ++  NH    + IR+V+CP +F+HG +D+ IP  Q+  LFE+C S+ KQ +  EG GHN  D
Sbjct:   62 VLFFHGNGEDLGGAVVFLRDLMNALSNTVRISVLAVEYPGYGIYKG-VANESGALRAAEAAFSFATRELSWPVSNLILLGVSIGTGPAVHLASQFDAGGLVLLAAYESVRSVAKHLVGTLASYLISDRFVNH----RHIREVRCPAIFIHGTQDEMIPCDQSVRLFERCPSENKQIVLAEGVGHNGFD 244          
BLAST of mRNA_H-akashiwo_Contig952.1.1 vs. uniprot
Match: L1I9I4_GUITC (Uncharacterized protein (Fragment) n=2 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I9I4_GUITC)

HSP 1 Score: 131 bits (330), Expect = 3.000e-35
Identity = 66/159 (41.51%), Postives = 93/159 (58.49%), Query Frame = 1
Query:    1 VIYCHANSNDVGMCYKYLDAMRSRLNVHVIAVEYPGYGFKKDQLPTEHGVNMAVYQVYDYVRGSLHWPAENITVVGRSIGTGPAVHLASTEEVGALVLISAFSSIMDIVDKHFPIIGRLVVGEQNHWESKKTIRKVKCPVLFLHGDKDKFIPPQQTSVL 477
            +IYCHANS D+G  Y     +   L VHV+  EYPGYG  +   P E  VN AV     +VR  L W  ++I V GRSIGTGPA++ A    VG ++L+S ++SI DIV++H   +   +    + W S + +++VKCPVL +HG  D+ IP   +  L
Sbjct:    2 MIYCHANSEDLGSIYACAQWISHMLGVHVLVPEYPGYGLCQGN-PCESSVNTAVLTACKWVRDVLCWDLDHIVVYGRSIGTGPAINAARLGLVGGVILVSPYTSIRDIVEEHVGAVFSWLTAGSSDWPSVEMMKEVKCPVLLIHGTTDEIIPASHSKEL 159          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig952.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3UX78_HETAK5.210e-5249.73Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3XMG0_HETAK2.970e-4342.46Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S0HWG4_9CRYP3.560e-3943.17Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7S0DSL2_9EUKA4.160e-3737.77Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A817YUD8_9BILA4.560e-3735.87Hypothetical protein n=5 Tax=Rotaria sp. Silwood1 ... [more]
A0A815DS09_9BILA3.030e-3634.43Hypothetical protein n=3 Tax=Rotaria sp. Silwood1 ... [more]
A0A7S0N4J5_9CRYP4.180e-3637.91Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A7S0QFG7_9CRYP1.810e-3540.44Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A0G4IXJ1_PLABS2.430e-3537.23UBA domain-containing protein n=1 Tax=Plasmodiopho... [more]
L1I9I4_GUITC3.000e-3541.51Uncharacterized protein (Fragment) n=2 Tax=Guillar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig952contigH-akashiwo_Contig952:13981..14747 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog5888.CAK67356
PFAMsAbhydrolase_6,Hydrolase_4
Model size549
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.06e-38
EggNOG OGsCOG1073@1|root,KOG1552@2759|Eukaryota,3ZE8D@5878|Ciliophora
DescriptionAlpha/beta hydrolase family
Cds size549
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388057.0909698-CDS-H-akashiwo_Contig952:13980..144381681388057.0909698-CDS-H-akashiwo_Contig952:13980..14438Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig952 13981..14438 -
1681388057.1032891-CDS-H-akashiwo_Contig952:14656..147471681388057.1032891-CDS-H-akashiwo_Contig952:14656..14747Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig952 14657..14747 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig952.1.1prot_H-akashiwo_Contig952.1.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig952 13981..14747 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig952.1.1

>prot_H-akashiwo_Contig952.1.1 ID=prot_H-akashiwo_Contig952.1.1|Name=mRNA_H-akashiwo_Contig952.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=183bp
VIYCHANSNDVGMCYKYLDAMRSRLNVHVIAVEYPGYGFKKDQLPTEHGV
NMAVYQVYDYVRGSLHWPAENITVVGRSIGTGPAVHLASTEEVGALVLIS
AFSSIMDIVDKHFPIIGRLVVGEQNHWESKKTIRKVKCPVLFLHGDKDKF
IPPQQTSVLFEQCTSDRKQFLYLEGYGHNRLDF
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mRNA from alignment at H-akashiwo_Contig952:13981..14747-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig952.1.1 ID=mRNA_H-akashiwo_Contig952.1.1|Name=mRNA_H-akashiwo_Contig952.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=767bp|location=Sequence derived from alignment at H-akashiwo_Contig952:13981..14747- (Heterosigma akashiwo CCMP452)
GTAATATATTGCCATGCCAACTCAAACGATGTTGGCATGTGCTATAAGTA CTTGGATGCCATGCGGAGTCGTTTGAACGTTCACGTGATTGGTGAGTGGA ACTCTGTTACTGACTCCTTTTTTGCTTGTCTGGCCTACAAATGGACACTT TATGGTGTTTGGATTTACCCATTACAGGTCTTTTTACTGATCTAACTTGT AATTCTTTTCTTTCTTGAATGATTTTTGGATTACCTTGCTTATGACAAGA CGCTTGTTCAATGGATTTAAATTACTTTAACTTTTTTGCTGCACTCCTCA ATATAACAGCTGTAGAGTATCCAGGGTATGGTTTCAAAAAGGACCAGCTG CCAACTGAACATGGCGTAAACATGGCAGTGTACCAGGTTTATGACTATGT TCGAGGAAGCCTGCACTGGCCCGCAGAAAACATTACAGTGGTAGGCCGAA GTATTGGTACAGGACCAGCCGTACATCTTGCAAGCACTGAGGAAGTTGGA GCACTTGTGCTGATTTCGGCTTTTTCCAGCATTATGGATATTGTGGACAA GCATTTCCCTATCATCGGTAGGCTAGTTGTGGGTGAACAGAACCATTGGG AGAGCAAAAAAACAATACGAAAAGTCAAGTGCCCAGTACTCTTCCTGCAT GGAGATAAAGACAAATTCATCCCACCACAGCAAACCTCGGTGTTGTTTGA GCAATGCACCAGTGACCGAAAACAGTTTTTATACTTGGAAGGCTATGGTC ACAACCGCTTAGACTTT
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Coding sequence (CDS) from alignment at H-akashiwo_Contig952:13981..14747-

>mRNA_H-akashiwo_Contig952.1.1 ID=mRNA_H-akashiwo_Contig952.1.1|Name=mRNA_H-akashiwo_Contig952.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=549bp|location=Sequence derived from alignment at H-akashiwo_Contig952:13981..14747- (Heterosigma akashiwo CCMP452)
GTAATATATTGCCATGCCAACTCAAACGATGTTGGCATGTGCTATAAGTA
CTTGGATGCCATGCGGAGTCGTTTGAACGTTCACGTGATTGCTGTAGAGT
ATCCAGGGTATGGTTTCAAAAAGGACCAGCTGCCAACTGAACATGGCGTA
AACATGGCAGTGTACCAGGTTTATGACTATGTTCGAGGAAGCCTGCACTG
GCCCGCAGAAAACATTACAGTGGTAGGCCGAAGTATTGGTACAGGACCAG
CCGTACATCTTGCAAGCACTGAGGAAGTTGGAGCACTTGTGCTGATTTCG
GCTTTTTCCAGCATTATGGATATTGTGGACAAGCATTTCCCTATCATCGG
TAGGCTAGTTGTGGGTGAACAGAACCATTGGGAGAGCAAAAAAACAATAC
GAAAAGTCAAGTGCCCAGTACTCTTCCTGCATGGAGATAAAGACAAATTC
ATCCCACCACAGCAAACCTCGGTGTTGTTTGAGCAATGCACCAGTGACCG
AAAACAGTTTTTATACTTGGAAGGCTATGGTCACAACCGCTTAGACTTT
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