|
|
Homology
BLAST of mRNA_H-akashiwo_Contig947.5.1 vs. uniprot
Match: A0A7S4D9L0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9L0_HETAK) HSP 1 Score: 372 bits (956), Expect = 5.180e-120 Identity = 290/351 (82.62%), Postives = 292/351 (83.19%), Query Frame = 2
Query: 419 PGDGAPAFYIKLLAELEDAVAAGLANKAAVKKMNGPNAKGLNRMKLVLRKHNKQYEDRIAAFRENPGGAEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKDLADLDSDEWPXXXXXXXXXXXXXXXELKASSLGEKR--CRRGPKKKEKGRGRTREAGAAARPGRRRFSAKEAAKA---------KELALDANLTAADLEQKVLEAAAARGRSKTDAKALLKRLGALAYLARRFGPRKELPVLFQLVSVQLDAVRTLDDYLELPVWKSCWSYLSRALGVLEAHPKLTLGAISEEDLADLVLAAANRKAGRENPAAAVSEKERA 1438
PGDGAPAFYIKLLAELEDAVAAGLANKAAVKKMNGPNAKGLNRMKLVLRKHNKQYEDRIAAFRENPGGAE E XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KKDLADLDSDEWP XXXXXXXXXX ELK + K+ KKKEKG AGA KELALDANLTAADLEQKVLEAAAARGRSKTDAKALLKRLGALAYLARRFGPRKELPVLFQLVSVQLDAVRTLDDYLELPVWKSCWSYLSRALGVLEAHPKLTLGAISEEDLADLVLAAANRKAGRENPAAAVSEKERA
Sbjct: 106 PGDGAPAFYIKLLAELEDAVAAGLANKAAVKKMNGPNAKGLNRMKLVLRKHNKQYEDRIAAFRENPGGAEEEGGSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASKPKKDLADLDSDEWPSXXXXXXXXXXGEEAELKGRARWVKKVPAAGAEKKKEKG------AGAKXXXXXXXXXXXXXXXXXXXXXXXXXKELALDANLTAADLEQKVLEAAAARGRSKTDAKALLKRLGALAYLARRFGPRKELPVLFQLVSVQLDAVRTLDDYLELPVWKSCWSYLSRALGVLEAHPKLTLGAISEEDLADLVLAAANRKAGRENPAAAVSEKERA 450
BLAST of mRNA_H-akashiwo_Contig947.5.1 vs. uniprot
Match: A0A7S2HV13_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HV13_9STRA) HSP 1 Score: 140 bits (352), Expect = 9.600e-32 Identity = 144/329 (43.77%), Postives = 196/329 (59.57%), Query Frame = 2
Query: 428 GAPAFYIKLLAELEDAVAAGLANKAAVKKMNGPNAKGLNRMKLVLRKHNKQYEDRIAAFRENPG----GAEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKDLADLDSDEWPXXXXXXXXXXXXXXXE---------LKASSLGEKRCRRGPKKKEKGRGRTREAGAAARPGRRRFSAKEAAKAKELALDANLTAADLEQKVLEAAAARGRSKTDAKALLKRLGALAYLARRFGPRKELPVLFQLVSVQLDAVRTLDDYLELPVWKSCWSYLSRALGVLEAHPKLTLGAISEEDLADLVLA 1375
G P FYI+LLAELED + L +K A KKMN N + LNRMKL LRKHN ++E I A+RENP G G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KK L ++DSD+W XXXXXXXXXX + LK +++ KR R+ KK + + ++ +K + K E ++ ++++ ADL+ K++E + RGR TD K L+K L L + ++FGPR E+P L LVS D R +DD+++LP+WK+C ++ R +L +P+L L +I +D+AD++LA
Sbjct: 106 GVPRFYIRLLAELEDLLLTTLKDKDAQKKMNKANGRALNRMKLNLRKHNLKFETEIKAYRENPEEEKEGGSGSSDNSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGKKKAP----------KKSLDEMDSDDWASXXXXXXXXXXEDVVDKALTGRDKWLKTNTVETKRVRKDKTKKPE------------QESKKADKSKTSNKRAEFSVSSDISEADLKHKIIELVSMRGRRNTDPKELIKNLNMLCQVTKKFGPRCEIPALCHLVSSFFDMQRNMDDFMDLPIWKTCHGHMMRISQILNENPELVLTSIGADDIADMILA 412
BLAST of mRNA_H-akashiwo_Contig947.5.1 vs. uniprot
Match: A0A7S2UU87_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU87_9STRA) HSP 1 Score: 136 bits (342), Expect = 1.870e-30 Identity = 178/326 (54.60%), Postives = 215/326 (65.95%), Query Frame = 2
Query: 425 DGAPAFYIKLLAELEDAVAAGLANKAAVKKMNGPNAKGLNRMKLVLRKHNKQYEDRIAAFRENPGGAEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKDLADLDSDEWPXXXXXXXXXXXXXXXELKASSLGEKRCRRGPKKKEKGRGRTREAGAAARPGR--------RRFSAKEAAKAKELALDANLTAADLEQKVLEAAAARGRSKTDAKALLKRLGALAYLARRFGPRKELPVLFQLVSVQLDAV-RTLDDYLELPVWKSCWSYLSRALGVLEAHPKLTLGAISEEDLADLVLA 1375
+G P FYI+LLA+LED +A L +K A+KKMN N++ LNRMKLVL+KHNK +E +A +RENP +EGE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXX+LK + K+ KK K + K AA+ + +D N+TA +LE KVLEA A+RGR T+ + LL++L ALAY AR+FGPR ELPVLF LVS Q D R +DDY++ WK ++ L R + VLE H L L +++ DLADLVLA
Sbjct: 119 EGMPQFYIRLLAQLEDLLAVALKDKEAIKKMNSSNSRSLNRMKLVLKKHNKNHEAALAKYRENPVESEGEESAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXQLKGRARWLKKTPAETTKKAKXXXXXXXXXXXXXXXXXXXXXXXAQALGDKAAAQQGLVRVDENITAEELEVKVLEAVASRGRRGTNIRDLLRQLQALAYAARKFGPRVELPVLFHLVSAQFDTTSRQIDDYMQTTSWKHVYACLMRVVSVLEGHQDLKLAVVADTDLADLVLA 441
BLAST of mRNA_H-akashiwo_Contig947.5.1 vs. uniprot
Match: A0A7S4E4E4_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E4E4_9STRA) HSP 1 Score: 130 bits (326), Expect = 2.040e-28 Identity = 146/330 (44.24%), Postives = 192/330 (58.18%), Query Frame = 2
Query: 413 HRPGDGAPAFYIKLLAELEDAVAAGLANKAAVKKMNGPNAKGLNRMKLVLRKHNKQYEDRIAAFRENPGGAEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKDLADLDSDEWPXXXXXXXXXXXXXXX--ELKASSLGEKRCRRGPKKKEKGRGRTREAGAAARPGRRRFSAKEAAKAKE-----LALDANLTAADLEQKVLEAAAARGRSKTDAKALLKRLGALAYLAR-RFGPRKELPVLFQLVSVQLDAVRTLDDYLELPVWKSCWSYLSRALGVLEAHPKLTLGAISEEDLADLVLAA 1378
H +G P FYI+ LAELED++ L +K A KKM+ N + LNRMKL LR+HNK++E +I +R NP E XXXXXXXXXXXXXXXXXXXXXXXXX +K+L D+DSD+W XXXXXXXXXXXXXXX ELK + KR K+ +K R +E K K+ L LDA T AD ++K+ E AARGR TD + L + L LA A+ +FG +EL L++ D+ RT+DDY+++P W++C L++A +LEAHP+ TLG + +++LADL LAA
Sbjct: 97 HIQKEGLPRFYIRTLAELEDSLDVALKDKEAQKKMSKANGRALNRMKLQLRRHNKEFEAKITEYRANPDAEE--------------------ESXXXXXXXXXXXXXXXXXXXXXXXXXSVEEKPKKVQKNLEDMDSDDWXXXXXXXXXXXXXXXXTGELKGRARWLKRTVTTTKRVKKER--------VIEKXXXXXXXEEVKKDKKGLVSSLRLDAIQTGADFDKKLTEVMAARGRKGTDPRDLKQALEVLAKAAQEKFGFHRELQCCMHLIASHFDSNRTIDDYMDVPTWRACHGQLTKACSILEAHPQATLGTVDDDELADLALAA 398
BLAST of mRNA_H-akashiwo_Contig947.5.1 vs. uniprot
Match: D8LM18_ECTSI (Eukaryotic translation initiation factor 3 subunit C n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM18_ECTSI) HSP 1 Score: 130 bits (326), Expect = 2.090e-28 Identity = 154/355 (43.38%), Postives = 199/355 (56.06%), Query Frame = 2
Query: 425 DGAPAFYIKLLAELEDAVAAGLANKAAVKKMNGPNAKGLNRMKLVLRKHNKQYEDRIAAFRENPGGAEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------KKDLADL--------------------DSDEWPXXXXXXXXXXXXXXXELKASSLGEKRCRRGPKKKEKGRGRTREAGAAARPGRRRFSAKEAAKAKELALDANLTAADLEQKVLEAAAARGRSKTDAKALLKRLGALAYLARRFGPRKELPVLFQLVSVQLDAVRTLDDYLELPVWKSCWSYLSRALGVLEAHPKLTLGAISEEDLADLVLA 1375
+G P+FYIKLLA LED +A L +K A+KKM+ N + LNRMKL LRKHNK YE IA FR NP E XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +K+L D D D + + + G KKK+K A G+ + +A L LD ++++ +LE+K+ E A+RGR TD K +L++L LAY+ARR GP +E+P++ LVS D +R +D+++E +WKSC Y+SR +LE+ P+LTLG + E +ADL+ A
Sbjct: 106 EGVPSFYIKLLANLEDLLAVTLKDKPAIKKMSATNTRSLNRMKLQLRKHNKGYEKEIADFRANPDAYAEESSSEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVKTQKNLEDXXXXXXXXXXXXXXXXXXXXXDGDMLKGRAKWLKKTDDTSDIKKRKDEKRAAKVEDGKKKKDK---------AVVTAGKEKGAA--------LKLDLDISSEELEKKLRECLASRGRKATDPKEVLRQLSVLAYIARRLGPVREIPIIMYLVSAMFDTLRNIDEFMETSMWKSCREYISRVADLLESRPELTLGQMGNEVVADLIQA 443
BLAST of mRNA_H-akashiwo_Contig947.5.1 vs. uniprot
Match: A0A835YUE3_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUE3_9STRA) HSP 1 Score: 116 bits (290), Expect = 8.080e-24 Identity = 165/364 (45.33%), Postives = 211/364 (57.97%), Query Frame = 2
Query: 425 DGAPAFYIKLLAELEDAVAAGLANKAAVKKMNGPNAKGLNRMKLVLRKHNKQYEDRIAAFRENPGGAEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK-------------------KDLADLDSDEWPXXXXXXXXXXXXXXXEL----------KASSLGEKRCRRGPKKKEK---------------------GRGRTREAGAAARPGRRRFSAKEAAKAKELALDANLTAADLEQKVLEAAAARGRSKTDAKALLKRLGALAYLARRFGPRKELPVLFQLVSVQLDAVRTLDDYLELPVWKSCWSYLSRALGVLEAHPKLTLGAISEEDLADL 1366
+G P F+IKLL +LED + L +KA VKKM+ N + LNRMKL L+KHNK YE IA R P G+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX K L ++DSDEW XXXXXXXXXXXX + K + + + +R +K K GRG +AR G R LD +T A +++KV E +RGR TD + +L++L ALAY++RRFGP +ELPVL V+ D +R++DDY+E +WK+C + L+R +G L+ P L LG+++ +D+ADL
Sbjct: 104 EGTPKFFIKLLVDLEDKLTETLKDKAGVKKMSATNTRSLNRMKLQLKKHNKAYEAEIADCRAKPDEYAGDAGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPKKVKKPTKPLDEMDSDEWXXXXXXXXXXXXXDEAPMAGLKGRAFWVKTVATDDAKAKREQRKLAKQEESXXXXXXXXXXXXXXXXAGRGVL----VSARLGFR--------------LDEKMTPAAVDRKVKEVLQSRGRKGTDPRDVLRQLAALAYVSRRFGPARELPVLMHTVAAMFDTLRSIDDYMETAMWKNCHATLTRVVGCLDECPDLRLGSMTADDMADL 449
BLAST of mRNA_H-akashiwo_Contig947.5.1 vs. uniprot
Match: A0A7S0GHY7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GHY7_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 5.140e-16 Identity = 168/349 (48.14%), Postives = 210/349 (60.17%), Query Frame = 2
Query: 428 GAPAFYIKLLAELEDAVAAGLANKAAVKKMNGPNAKGLNRMKLVLRKHNKQYEDRIAAFRENPGGAEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKDLADLDSDEWPXXXXXXXXXXXXXXXELKASSLGEKRCRRGPKKKEKGRGRTREAGAAARPG---------RRRFSAKEAAKAKELAL------DANLTAADLEQKVLEAAAARGRSKTDAKALLKRLGALAYLAR-RFG--PRKELPVLFQLVSVQLDAVRTLDDYLELPVWKSCWSYLSRALGVLEAHP-KLTLGAISEEDLADLVLAAANRKAGRENPAAA 1417
G P FYI++L +LED + + + NKA KK + N + LNRMKL LRKHNK YE + +R NP +E E XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXX S P KGR R ++ ++R KEA K K ++ D +LT + L +K E RGR D K L++ L +LA LAR RFG R E+P+L V+ D R++DDY+E+ WKSC SYL+R + VLE+ + TLG ++ EDLA+ +L + K+G++ AA
Sbjct: 110 GIPRFYIRMLCDLEDFILSKIKNKAEFKKYSASNGRALNRMKLTLRKHNKAYEKVMTEYRSNPVESEVEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDS---------PYGALKGRARWLKSTKVVETKVKEDKDVRIKKRQEEKEAKKTKSVSRRTILPDDESLTPSVLNRKCKELLMTRGRKGADPKELVRGLESLAKLARERFGNDARVEIPLLMNTVTSMFDLQRSMDDYMEMFQWKSCHSYLTRIVDVLESEGGRYTLGVLAAEDLANDLLMERSSKSGKKMKGAA 449
BLAST of mRNA_H-akashiwo_Contig947.5.1 vs. uniprot
Match: A0A6U3ZAQ9_9STRA (Eukaryotic translation initiation factor 3 subunit C n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ZAQ9_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 1.080e-15 Identity = 153/310 (49.35%), Postives = 189/310 (60.97%), Query Frame = 2
Query: 428 GAPAFYIKLLAELEDAVAAGLANKAAVKKMNGPNAKGLNRMKLVLRKHNKQYEDRIAAFRENPGGAEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKDLADLDSDEWPXXXXXXXXXXXXXXXELKASSLGEKRCR------------RGPKKKEKGRGRTREAGAAARPGRRRFSAKEAAK---AKELALDANLTAADLEQKVLEAAAARGRSKTDAKALLKRLGALAYLARRFGPRKELPVLFQLVSVQLDAVRTLDDYLELPVWKSCWSYLSRALGVLE 1312
G P F++++L +LED V LA+KA KK++ N + LNRMKL LRKHNKQY+ + +R+NP G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXX LGE + R RGPK E+ + R +K + +++LT + L +K+ E A RGR TD K +L++L L+ LA RFGPR E+P L +++ Q D VRTLDDY+E W+SC YL R +L+
Sbjct: 111 GVPRFFVRILVDLEDFVKTSLADKAGFKKLSPTNGRALNRMKLTLRKHNKQYDAIMEEYRKNPV-VSGSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGELKGRARWLKKVSTDTKRGPKDAEEKKRRAXXXXXXXXXXXXXXXXXXXXXXXTSKSIIPESSLTPSLLVKKIGEVVALRGRKGTDNKVVLRQLEGLSRLAARFGPRSEVPALIFVITAQFDLVRTLDDYMETKTWRSCAEYLGRVANILD 419
BLAST of mRNA_H-akashiwo_Contig947.5.1 vs. uniprot
Match: A0A421GR70_9STRA (Eukaryotic translation initiation factor 3 subunit C n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GR70_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 5.390e-11 Identity = 53/106 (50.00%), Postives = 67/106 (63.21%), Query Frame = 3
Query: 105 MASRFWAGGSSSXXXXXXXXXXXXXXDSAPVTTTKGPQRT---WAIESDSDSEDEVRVVKSAKQKALEGMKAAATKIKNRLKVGDWSGRAGGLDELNKAVAKADRS 413
MASRFWAGGSSS XXXXX T+ + QR WA++SDSDS++EVRVVKSAK KALE M+ IKN +K+ DW+ DEL+K + +A +S
Sbjct: 522 MASRFWAGGSSSEEESDVSXXXXXE------TSQQXXQRAASRWAVQSDSDSDEEVRVVKSAKDKALENMERNCANIKNHMKINDWTQIQTEFDELSKLMDRAKKS 621
BLAST of mRNA_H-akashiwo_Contig947.5.1 vs. uniprot
Match: A0A812VFM2_SYMMI (EIF3C protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VFM2_SYMMI) HSP 1 Score: 73.6 bits (179), Expect = 8.660e-11 Identity = 36/64 (56.25%), Postives = 44/64 (68.75%), Query Frame = 2
Query: 425 DGAPAFYIKLLAELEDAVAAGLANKAAVKKMNGPNAKGLNRMKLVLRKHNKQYEDRIAAFRENP 616
+G P FYIK+L +LED + A L +K +KKM +K N MKL LRKHNK YED IAA+R NP
Sbjct: 30 NGIPKFYIKMLGDLEDFLVATLKDKDGIKKMKAQISKSFNTMKLTLRKHNKTYEDEIAAYRANP 93
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Seed ortholog | 2880.D8LM18 |
| Preferred name | EIF3C |
| PFAMs | PCI,eIF-3c_N |
| Model size | 1445 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K03252,ko:K08597 |
| KEGG Pathway | ko03013,map03013 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003743,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005852,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0031369,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 |
| Exons | 10 |
| Evalue | 8.04e-23 |
| EggNOG OGs | KOG1076@1|root,KOG1076@2759|Eukaryota |
| EC | 3.4.22.68 |
| Description | Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation |
| Cds size | 930 |
| COG category | J |
| BRITE | ko00000,ko00001,ko01000,ko01002,ko03012,ko04121 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681388054.146295-UTR-H-akashiwo_Contig947:186387..186471 | 1681388054.146295-UTR-H-akashiwo_Contig947:186387..186471 | Heterosigma akashiwo CCMP452 | UTR | H-akashiwo_Contig947 186388..186471 + |
| 1681388054.169808-UTR-H-akashiwo_Contig947:186828..186990 | 1681388054.169808-UTR-H-akashiwo_Contig947:186828..186990 | Heterosigma akashiwo CCMP452 | UTR | H-akashiwo_Contig947 186829..186990 + |
| 1681388054.1826837-UTR-H-akashiwo_Contig947:187223..187318 | 1681388054.1826837-UTR-H-akashiwo_Contig947:187223..187318 | Heterosigma akashiwo CCMP452 | UTR | H-akashiwo_Contig947 187224..187318 + |
| 1681388054.1913116-UTR-H-akashiwo_Contig947:187628..187738 | 1681388054.1913116-UTR-H-akashiwo_Contig947:187628..187738 | Heterosigma akashiwo CCMP452 | UTR | H-akashiwo_Contig947 187629..187738 + |
| 1681388054.2020376-UTR-H-akashiwo_Contig947:188170..188233 | 1681388054.2020376-UTR-H-akashiwo_Contig947:188170..188233 | Heterosigma akashiwo CCMP452 | UTR | H-akashiwo_Contig947 188171..188233 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681388054.212634-CDS-H-akashiwo_Contig947:188233..188329 | 1681388054.212634-CDS-H-akashiwo_Contig947:188233..188329 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig947 188234..188329 + |
| 1681388054.222993-CDS-H-akashiwo_Contig947:188645..188764 | 1681388054.222993-CDS-H-akashiwo_Contig947:188645..188764 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig947 188646..188764 + |
| 1681388054.2343695-CDS-H-akashiwo_Contig947:189042..189388 | 1681388054.2343695-CDS-H-akashiwo_Contig947:189042..189388 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig947 189043..189388 + |
| 1681388054.2450902-CDS-H-akashiwo_Contig947:195018..195147 | 1681388054.2450902-CDS-H-akashiwo_Contig947:195018..195147 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig947 195019..195147 + |
| 1681388054.2589135-CDS-H-akashiwo_Contig947:204176..204316 | 1681388054.2589135-CDS-H-akashiwo_Contig947:204176..204316 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig947 204177..204316 + |
| 1681388054.2807415-CDS-H-akashiwo_Contig947:204860..204960 | 1681388054.2807415-CDS-H-akashiwo_Contig947:204860..204960 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig947 204861..204960 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig947.5.1 >prot_H-akashiwo_Contig947.5.1 ID=prot_H-akashiwo_Contig947.5.1|Name=mRNA_H-akashiwo_Contig947.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=310bp
MNGPNAKGLNRMKLVLRKHNKQYEDRIAAFRENPGGAEGEGGSASSSSSS
SGSDSDSSSSGSSSGSDSGSDSDSDSGSESDASEKKKKKPASKPKKDLAD
LDSDEWPSDAESDSDSSDGEEAELKASSLGEKRCRRGPKKKEKGRGRTRE
AGAAARPGRRRFSAKEAAKAKELALDANLTAADLEQKVLEAAAARGRSKT
DAKALLKRLGALAYLARRFGPRKELPVLFQLVSVQLDAVRTLDDYLELPV
WKSCWSYLSRALGVLEAHPKLTLGAISEEDLADLVLAAANRKAGRENPAA
AVSEKERAAE back to topmRNA from alignment at H-akashiwo_Contig947:186388..204960+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-akashiwo_Contig947.5.1 ID=mRNA_H-akashiwo_Contig947.5.1|Name=mRNA_H-akashiwo_Contig947.5.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=18573bp|location=Sequence derived from alignment at H-akashiwo_Contig947:186388..204960+ (Heterosigma akashiwo CCMP452)
CCAGCAGCCAGCAAAAAGAGCCTTTGTCTGCCCACCAGCCAAGCCTTGTA
CTATAATCCTTGGTGGCATCGTTTTATTGCCCAGGTAAGCGTAGTGAAAT
TTCCATTGTGAATTGAAATGCTGTGTTTACAATGATGCAATTCGATTCTT
GTTTTCCTGGCAAAATCGTGTCAAAAATAGAATTTGAGATAGAAAAGGGC
AAGTGATCTCAACTCAAATGTAGTAGCATCTGTACCATAAAAAGTGGGGA
AGTTTTTTAGTAAGATGACGGCTCGGCGAAACTAGACCATAACTTTTTTG
CACTCCGTGTTTTCTTTTTCAAATCTGGGTAAGGCCTGATCTGGGTGAGA
AAGCACTAATGTGCATGAGGCCGGAGGAGTTCTGTAAAAATATTTATGAA
ATATACTATCGATCAGCATTTTCATTTTTTTCCGGATGCAGGTGCCAATT
CCTAAACGACCATGGCTTCGAGATTTTGGGCCGGAGGATCATCCTCCGAT
TCAGACAGCGATTCTTCTAGCGGCAGCAGCAGCTCCGATGACTCCGCACC
CGTGACCACCACGAAGGGTCCTCAGAGAACCTGGGCAATTGAAAGCGACT
CAGGTAATCGAGCTTGCGGGTGTGGTATTAGTTTTGAGCGATCTTTCACG
ATTGTTGCACGCACCAGATGCCACTCTCATATTCCCCTCCCTCAATGATA
GAGTGGCAAGTGGCTCTGCTTATAGAAAGAAGCTAGGGCTTCTGCCCCGG
AAGTGATTTGAAAGGCGAGACTTGAAACTAAAATTAACATCATCATCCCC
TTTGCCCACTTCCCCCCCGCTGTTGGTTCTCCTCAGATTCCGAGGACGAA
GTGCGCGTGGTGAAGTCCGCGAAGCAGAAGGCCCTGGAGGGCATGAAAGC
GGCCGCCACCAAGATCAAGAACCGCCTCAAGGTGCGAGGGGCGGAGCCGG
GTTGGCAAGGAAGGGCGTTCGGGGGCAAGAGACATCGTTCTGCAGATAAC
AACGGGGGTGGGGCCTCAGCAGCGATCGCGGTCCCCATGCTCCCAAGGGC
GCAGCCGCAGCTCGAATCTTCATCTCAGCTTGTCGTTCTGGACCTTCTTC
CCCCCCATCTTCCTGCTTGTGTGTGCATTTATGAATATCTATACAAATTT
ATATTCTGACATCCACACACCAGCTCCAAATCATAGAGCACCTGAAGCTG
GTGAGGCCACCGCCCCAGACTTTTGTTcCCTCTGCCCGCAGGTGGGCGAT
TGGAGCGGGCGTGCAGGCGGACTTGACGAACTCAACAAAGCGGTGGCCAA
GGCCGACCGCAGCACCGGCCCGGCGACGGCGCCCCCGCCTTCTACATCAA
GGTGCGCGATGAAAAACACACCCCCAGGGTGCGGGGCGCTCTTGACAAAA
AATGTATACTTGATAGTGGTGTTGTTATGTTTTTATTATCCTCTTTGTTT
TAATAATAATTAGTTGCTCTTGGGCAATTGCTCCGTTGTTTTGTTGGCTT
TGATTATCCAAGCACAGGCTGTGGCTGCTGGCAACCGGTTCAACTGGTGC
ACAGCAGAACCTCCAGAGTAGGGAGGAGGGCGGGAGGCGGGGCTGGGGCG
CACAGCGTCTCTTCAATGCGGCACCGTTCCTGCACCCCCACCGCCCGTGT
ACCAAGTGCCAGGCAGCGCCGCCATGAACAGGTCCGCGCGGCACAGGCCC
ACCCCCCTTCTTCTCCGCGAACACTATGGGTATTATATCCTGATCAGTGA
GTTTGATTTCTTTATACTCTGTATGGCGCGCAGCTGCTGGCGGAGCTGGA
GGACGCGGTCGCGGCGGGGCTGGCCAACAAGGCCGCGGTGAAGAAGATGA
ACGGCCCCAACGCCAAGGGCCTGAACCGCATGAAGCTCGTGCTGCGCAAG
CACAACAAGCAGTACGAGGACCGCATCGCGGCCTTCCGCGAGGTACGCGG
GCGGCGGCGGCGGCGGCGGCACCGAGGCCCCGCCCGCCCCTGCCTTAGCA
CCGCGCGCCCCTCCTCTGCAAGCTGCGCCCGCTGCTTTTTGCCAAAGGGT
GCGACGTGCGGGCCCGCGCCGCCCGCCCTCCTTTGGGAAGGCCGTGTAGC
AAGCAGCAGCCGGGCCGCCTCAATGTTAGGGAGTTCTATGTGGGCCGCCG
GGTGAGAAGCGCGGCGGCACCGCGGATCGGCCCGCCTCCTGGTGCGCCTC
CTGCCTCACCCCCACCCTGGGCATGGCCGCCCCCCCCCTCCTGGGCCGGC
CGCCGCAGAACCCGGGGGGCGCGGAGGGGGAGGGGGGCAGCGCGAGCAGC
AGCAGCAGCAGCAGCGGCTCCGACTCGGACTCCTCCAGCTCGGGCTCCTC
CAGCGGCTCCGACTCCGGGTCCGACAGGTGGGCGTCTGGGGGCAGCTAGG
GTGGGGCTTGAACACCCCTCTCCGGCGCAAGGTGGGGGGCCTTGTTTGGG
GGGGCGGCGCCCCTCCTGCTGTGGTGCGAGGTTCCTCCTTCCTGGGAAAA
AACGATCTGGGGCGGGGAGGGGAGGCTGTGGCGACGTCGCCCCCCCCCGC
CCGGCGCCCTCCAACTTGATGGGAGAGGAGAGGGGCACGCCTGTTTGCTT
CGACACCGCCGCCGCGTTTTTGCCGTTCCCCCCCCTCCCTTTCCTTCCCC
CCCAGCGACTCGGACAGCGGGTCGGAAAGCGACGCCTCCGAGAAGAAGAA
GAAGAAGCCGGCCTCCAAGCCCAAGAAGGACCTGGCGGACCTGGACTCCG
ACGAGTGGCCCTCGGACGCGGAGTCCGACTCGGACAGCAGCGACGGCGAG
GAGGCCGAGCTCAAGGCCTCAAGTCTGGGTGAAAAAAGGTGCCGGCGGGG
GCCGAAGAAGAAGGAGAAGGGGCGGGGAAGGACAAGGGAGGCGGGCGCTG
CAGCTCGCCCGGGCAGGAGGAGGTTTAGCGCCAAGGAGGCGGCCAAGGCC
AAGGAGCTGGCGCTGGACGCCAACCTCACCGCCGCGGACCTCGAGCAGAA
GGCGTGACCCCTCCCCCCCACCCTATGGCCACCCCCTAACCTTATCACCC
CCTCACCCAACCCTGCGTAACCCTGACCCGATCACCCCCCCGCCGCACAC
CTGCCGCCCGCCTCTTGCTGCCTTCGCCGGCCCTGCCGGCTTTGCTGCTC
TTCGCATGGAAATTTTTTACTCTCCTCCTAGCCAATCATCATCGAAGGTT
TTTTAATGGTCAACCAGCCAATGATCTTGGGGAACTTTCAAGTCACTTGG
ACTAAATAATCCCCAACAAGGACTAAAAAATCCTCAAGATCAATGGCTGG
TGGGTCCAGTGGGCTCGGGAAGCAATTCTATGATGGTCTGATTTTGCAAA
GGTATGAATCAATTCATTTAATGACTTTTGGTTGTTTTTGGGATAAATTA
GCCTAGCTTGAGTAATGATGCATGAAATAGACAGCAGTGGAACGGGACGT
TTTGTTGCGGGGAACTGTATATCACCTGGGGGCTTTTGGGCGAGGGGACG
CTCTATATCTGTGGGCCACAAAGGGTTCTTGGGCTATTTTCCCTGACCTT
AGGCTGCAGTGAAACTCAATATTGGTAAAATATCAAGTGTTTTGAACTCA
CCTGTTTGTCCAAATGGGTATATATTCGCTGATTTGTATTACTAAGAGGT
TTCAATTGCCTAAAGAAGCTTGACAGTCCAATGCCGCACCATTTTACTCC
CAATACCATTCCGCTGAAGAACGAAAAGGCCTACAGTGTTCTCTCGACTT
TCAGATTCGGTCATTTTCGCGTTAAGTTAAAATATTCTTAGCGTTCGCGG
ACCTTACCTTTGATTATTCTTAAGTATTTTCGAGGTGGAGAAGAAGTAGA
AGAAGAAGTAAAGGAGAAGAAGCAGAAGGACAGCCACAATGACAATGATG
ACAATAAGCAGTAGAAAAAGAACAAAACGATTGCAAAAAACAATGACGAA
AAAATTCAATTTTCGATCCGTCGTTTATTTATATTTTTCCCTCCATGTGA
ATCAGAAAGAGCAAAAGACGGCACAATTGTGACCGTTTTCTCCACATCGT
ACCAACCCCGCCCAACAACCACCTCCTCCTCCATAAAAGCAGCAGCCAAA
CTCAAAAACAGCAGCAAAGGCGACATTGAAAATTCCAATTCCAGCTGTCA
CAACCGAGTTTACATTTTTTCATTTGACTCGAAAGTTCTCGACTCGATTC
AGTCTCGAAATCAAGTATGAAAAGAGCAACCCCCTCTCACCAAGCGTGTA
TCGACCGTTTTTTCAAGAGAACGGCAACAAGGCAGGACGGGGAGATAGTT
ACGATGACTACTGATAAAGCTCCTCCGAAAAGAAAACACAGTTGCCCTCA
CTGCGACTTCAAGTGCGCAAAGGTGGGTCCTCTTAGTCTGCATATCAAAA
CCCAGCACCCTGAATCACCACCCCAAAATACTAGGCAGCTTGTCTTGGGG
AGGGCAGGGGGCGCCAGGGGAGCAACCTCTCGTATAAGAATATAATAAAC
TTTCAAAGTAACTTAGCATATTCTTAACAAATTTTTAATTTTTTTTTAAC
TTAATATTCTTAAAGTCGTGTATTCTTAAAGTCGAATTAAAACTGTAGTC
GGTGTCAGGCTTAAGGGGACAACCCTCTATGGGAAGTTCGGCCATACTGT
TGTCGCGGGCGCGCGACGAGACTCGAACCCAGATGTAAGTAAAAAACGAG
TCATGCGCTCTAGCCATTCGGCAACTTGATCTTGTAGTATATATATAGCC
CATCGATTTAAAACATATATGACCTTCAACCAAAAATTCCAAACTGACTC
CTCATCTATAAAAAATATATATCGCAACAAGTTCGTGTCGGAAAACCCGG
GAAAGCATGCAGGCTACATTTTGAGGTATTTTCCCGGGTTTTCCGACACG
TAGAACTCGGTTTTTTATTTTTTCGGGGGATTTGGCCACATTATTGTATA
CTTTAACCTGACACCGTCTGCCTACCAATTCTGCACATTACATGGGCTTC
GTGCATTGCCATTCGTTGAACCGAAAGACACAGGTTACCATAATGCCTTC
TCACCTGAATCAAGTGGGCCCATGATGAGCTGGGATTTTTTTTTTCCGTG
TTGCTCTGTGCTGTTCTTACTTTTACTGCTGCCGCCGCCAGCTGCTGCTG
CTCGTTACTGTTTACTTCCATGGTGACGAGTCATCCTCGACGCCCTTCCT
TATTCGTTTCCTTCTTCCAGTTGCCGCTGTCTAATTATCCGAATGAGAAA
ATTCAAATACGCGCCCTGAAAGGGGCATTCCTCCTTTAATGTTTGTAAGA
TGCTCTTGGAAGATCTAGCAGAACTCCGGCCAACATGAATGTGCCCCGGA
GGGAGCATCCCGGAGGAGCAAGGAATAGGCCGATGGTTCATGCCAATGAC
TCACTGTGGCTTCGGAGACGATTGCTGCAACGGTTTGAGTCTCGACCGAG
CTTCTTCAACATCTGTGTACAGGTTTTATTTGTGCAGCAGCTTGGAAAGT
GCAAGGCTTCGCAAGAAAGGGCCTGGCGTGCGCAACTGCGCTGAGGTCCA
GAGATGACGGCCAAGTACGTCCGATACCTCGTAGTACATATGACTATATT
CGGCAGTGGTTTGTCTGGGGCTGGCTCCGGCATACTGTAATCAGGCAAAG
CCCTCTGCTCGTACAGCCATTTGGAGAAACTGGCGATTCTGAGTCACCGG
GACTCCGGAGCAATTAAAAGTTGAAACTGGCTGGGTTCATCAGAAAGGTA
TTCCAAGAGGTTCCTGAAGCAACGGCAGCAGCAGTAGTCGTCATTGAAGG
GAAGCACAGGCCAATGGAGACGATGTCTGCGGCGCAACGATGATGACAGG
AAAAAGGAGGAGGAAGATGATTAAACCGAGCTTGACAAGAAGAAGGGGGC
ATTGGTGTTGTGCAACGGTAGACATTCTTACTTGCTCTGGTGCTGTTGTG
GGACGGTTACTACTGTCTGTTATGTGCTCATGTTGTGATGATGGTTTTGC
AGCAGGGGAGGAGCAGAAGAGGAGCAGTAGTGGGAGGAGTAGTGGGAAGC
AGCAGTAGTCACGCATGTATGCATACGATCTCTTGCAAAAAATTTCATGT
GTTAGAAAGGAGAAGACGGCGCCCGTCGTTGCCTGCTGATCCTTGCATCC
ATAACTTCCATCGATGTACTGACTGACAAGCTACCTCAAAAGCCACAGGG
CTATGCTACCAGACCTATTGGCGTGGCTGGCGCTGTCCCTCAAAGGTTAC
AGCCGGGGGCCTCCTAGCAAGATCAGTGGGAAAGCCTGTTCAGGGCAGTG
GGCGCTATCGCGTGTTGAAAACGATGTCCTAAAAACATGACATGAGGCTG
AACCGTTGTGCTCTAACTGGATCCTGTTCGGGCATTCGCTAATTTGAGAC
CTCTACCTTGTCGTCTGGGCGGGTGTTTGAGGCAGGTTCCAGAGTGGGGG
CTCCATGCAACAGGTGTGGAGTCTTCTCACTGATCCCTCTACCCTCGTGT
TGATGCCCAGTGCATTCGAAAGTACTCTGGACTTGCCCCAAACACCCGCC
CAGATGACAAAGCAGAGGTCTCATATTAACGAATGCCCAAATAGGATACA
GAAAGAACACAACGGCTCTGCCTCATGTTATGTTTTTAGGAAATCGTTTG
CAACACGCAATATCGCCCACTGCCCTGAACAGGCTCTCCCACTGACCTTG
CTGGAAAGGCCCCCCAGAAGTAACCTGTGAGGGACAGCGCCAGCCACGCC
AATAGGTCTGGTAGCATAACCCTGTGGCTTTTGAGCTCGCTTGTCAGTCA
GCACATCCATGGAAGGTGTGAATATACATGGAAAGCAGCAGACAACGACG
GGCGCCGTCTTCTCCTCTTGAACACATGAAATTTTTTTGTAGGAGTTCGT
ATGCATACATATGTGACTACTGCTGCTTCCCACTACTCCTCCCACTACTG
CTCCTCTTCTGCTCCTCCCCTGCTGCAGAACATCATCACAACATGAGCAC
ATAACAGACAGTAGTAACCGTCCCACAACAGCACCAGAGCAAATAAGAAT
GTCTACCGTTGCACAACACCGATTCCCCCTGCTTCTTGTCGAGCTCGGTT
CAATCATCTTCCTCTTCCTTTTTCCTGTCATCATCATTGCGCCGCAGACA
TTGTCTTCATCGGCCTGTGCTTCCCTTCAGTGACGACTACTGCCGCTGCC
GTTGCTTCAGTAACCTCTTGGAATGCCTTTGGCTGATGAACCCAGCCAAT
TTCAACTTCAAATTGCTCCGGAGTCCCGGTGACTCCGGATCGCTGGTTTC
TCCAGAACTCTTCTCGTCTCACTGACCTCGAAAAGGCCATTGCGAATGGC
TGTGTACCAGCAGAGGGCTTTGCCTATGCCTGAGCCCCAGATAAACCACT
GCCAAATAGGGTACAATGTTAATTCGATATTAAGAATGAATACACGACTT
TAAAAATATTAAGTTAAAATTTTGAAAAATTGTTAAGAATATTCTAAGTT
ACTTTGAAAGTGTATTATTCTTATACCAGAGGTTGCTCCCATATTTCAGA
TGAAGGTTGTTCTTCAATGATGGCATGATGTCAGAAGGGGTGGCCAAGAC
AAGCTGTTCAGTATTATTTTTGGCTGGTAATTCAGGGTGCTGGGTTTTGA
TACGAAGACTACTCTAAGAGGATCCAGCTCTGTGCACTTGAAATCCGCAG
TGAGGGCAACTGTGTTTTCTTTTCGGAGGAGCTTTATTAGTAGTCGGTGT
TATTATCGTTACTATCTCCCCGTTCTTCTTTGTTGCCGTTTTCTTGAACG
ATATAAGCTTGGTGAGAGGGGGTTGCTCTTTTCATACTCGATTTCGAGAC
TGAATCGAGCTGAGAACGTTCGAGTCGAATGAAAACATTGTAAACTCGGT
CGTGGCAGCACTGCTGCTGCTGCTGCTGCGTTTTTTCGTTGTCGTTGTTG
CGATCGTTTTGTTGTTTTTCCTACTGCTTATTATCCTTGTTGTGCTTGTA
GCTCTTCTTCTGCTTCTTCTCCTCATGTCTTCTTCTACTTCTTCTCCACC
TCGAAAATACTTAAGAATAATCGAAGGTAAGGTCCGCGAACGCTAAGAAT
ATTTTGACTTAACGCGAAAATGACCGAATCTTAATATCGAGAGAACACTA
TACAAGGCATCGGACGTACTTGGCTGCATCTCTGGACCTCAGCGCCGTTG
CGCACCAAGGCCCTTTCTCGGGAAGCCTTTTTACTTTCAAAGCTGCTGCA
ACAAGAATATTTGTATACACAGAAGTAGAAGCTTGGTCAAGTCTCAAACC
GTGGCGCAATCATCTTTGAAGCCACAGTGAGTCACTGGCATGAACCATCG
GCCTACTCCTTGCTCCTTCGGGATGCTCCTGCCTGGGCACATTTGTGTTG
ATCGACATGGAAAATTTTATTCCACTCCTAAAACAACTGCATAGGCATAT
GACGATGAGTACCAAACAACAGTAGTGTATTGGGATTTTTTTTTCATGAT
TGCTCGCCGTCTTTAAACAAATTTGGAAGTTTTTCGTGAACTTTCAAGGC
AGAGGCCAATCACGACACCGACCGGCCGCCTTCCCCCCCTCCCCCGGCGG
CGGGCGGCGGGCGGGCGGGGCGGGGCGGCAGGTGCTGGAGGCGGCGGCGG
CGCGCGGGCGCAGCAAGACGGACGCCAAGGCGCTGCTGAAGCGGCTGGGC
GCGCTGGCCTACCTGGCGCGGCGGTTCGGCCCCCGCAAGGAGCTGCCCGT
GCTCTTCCAGGTGGCCCCCCCCCCCCGCCCGCCCAGGGCACCCGACGCCT
GGGGGGTTTTCCCAGGAAAAGGATAGATGTGATGCGTGTATCATCTAAAA
AATAGTCCTCGCATGGCAGGGCACAGGGTTGGTCGACTGAAAGCAGTATG
TAGCCTCACCGTTCAAAAGTTCTATAGATGGATGTGCTTAGGCAGGGTTT
CAGTTTTTTTTTTGCTGTCACGAATTAGCCCTGCCCGTGTCCGTTTTGCT
TTTGGCATGAGATGGCCTAGCGTGGATGAGGGGAGGGTGAGGATGGGGGC
AGTTTTTATGTTTTGCTTTTTTTGGCATGAGATGGCCTAGCGTGGAGGAG
GGGGGGGGGGAGGATGGGGGCAGAGTTTTTATGATATCACCCACGACTTT
CAAATTAGATGAAAAAAGAAGAAGAGGAGGATATAAACTTCAACTTGAGA
AGAGGAGGAAGAAGACAACAAAAGAAAAAAGAATTTAAATAAACTTCAAT
GGAGCCAGAGGTGAATAGAAGTAACGTGACTCTCCCGGTAAAACAGCCCC
TACGAGTGCAACCCCTAAGCGTGCTCAACCACTGGCATTTTCTGCGTGCC
GACAAAAGCTGTCGGGGGATACGAAGCTAAAGGAAGCGATCTGATTTTTC
GAAGTGAAGGTTTTTGGTAAGTTCATACTCATTTTCTGCGAAGCAGTTTG
GAAAGTTTTTGGAGAAAAGCAGTTTCATTATTTTACAACAGGCTCAGCAA
GCTGGAATCTCTGCTATGATTGGTGGATGGTTCAACAGTAAAGGCTAAGA
GCAAATCATATTGATTGATCCGTTTTTTCTTGTCATCAAACGTGAAGACT
TCTGCGAGGATAGCTCGTCATGTTTTGAGGAGGAGGATGCTGTGTCACAA
TTAAGGTGGCCTGAAGAGACAGAGGCTGTTGCAGAGCCCGAGTCATTCGG
TTGGAGTCCCCGAAATGCAGGCACAGTCACCATAGATTGGGTGTTGTAGG
ATAGCTTTTTTTCTATTCTATAAAAATGAATATATCTACCTAGTGGTTTG
TGATTTGAGCGAGCCTGGACCAGTGCCAGATCTGCTCCACGTCAAAGACA
TCAATGTCAAAGTAGAAGAAAAAATGATAGTTATTTTCAATTAAATTTGA
AATTGATGTTAACAAAAACATTCATTGTTTCAAAAACTTTTTGGCTTCTA
TACGAAGGTTTCAACCTCAAAAAATCGATGATTTAACTTCGAAAAGGCAA
TCAGGTTATGATGTGATATGGTTGGTTACAGTTATGATGGAGAGGGGAGT
ACGTAAAAATAAAAAAATAAAAATAAAATTGTAACCTATGCAGTACGCAC
GCGAATCAAAAATGATTAACGACTTGCACCACCAAAATTCATTCAAATGC
CTCTTATTTTAAGGTTAAAAAAAAAAAAACCGATTTAAAGAAAATGAGAC
ATCAAGCACAGCAACTGACTTCTGCTGGAGGCTGAAGTAGGTCTGCCATT
TGACAATATAGAAAACGTAAAAAGGTGGGGTCTCATGAAAACGAAGACCC
CTCTGATCTTTTTTTCCCAGCTGCGGTTCTTCAGGTGCTAGCCCACCAGC
CAAGGTCCGTCATGCCGAAGCCCTTGTCAAAAGACGATCGTGATGGCATT
GCGGCCATCGAAGGTTGGAACATCAAACTGCCGCCTCAGGCCCCCACAGT
CTCCGGACCTCAGCAAAAATGATTTTGGCTTTTTCTGTTCATTGCAAGCT
CTGACCTGGTACGGCGATTACAACGATCTCGAACATCAAAGGTTGGAACA
TCGAACTGCTGCCTCAGCCCCCAAAGTCTCCGGACCTCAACAAAAACGAT
TTTGGCTTTTTCCATTCATTGCAAGCTCTGACCTGTTACGACGATTACAA
CGATCTCGAAGAGCTTCATTTTGAAGTTACCAAGCAATCCCTTTTGTATG
ACAAAGAAAACCTTATGGCAAATAACAATACCATATATGAAAAATGGCAA
GAAGCCCATGAATGAATGACCTTGGCCCAAAGCATAGTACCCAAGGGCGG
CCACGTAAGCTCACTACTCCTCAGTTCAACATGCAAGTTTACTCTCTGTT
CCAAGAGGACAACGTGCAACTTATCGGGCGGCTGAGAAAAGCACCGGCCT
GTCCAGGGGCACTATCTGCAGGTTCTGTAAGCGGGGTACAGCCAAGTCCA
AGGCGAGCTACATCAGACGAAAACTTTCCCTGGGCAAACTTTCCAAAAAT
ACATTTACATTACTCGCGAGGAGTTCGGCAAAGCCCCCGACGACTAAAAT
GAAGGCCCTGGTCGATGAGCCCGAGCCTGAGTCTGAATCTGAATCCATTA
CAGTTGGCAGTATTGCGAGAAGGTTGATGATGAAGCCTCCTACTACTACC
CGCCGCCGTCGCTCCTCCTATAAGATGTGGTCCGTGTTCCTCTGCACCTA
TATACCCAGCCCATGTTATTTTATTTTTTAAATTTAAATGTTCAAAGATG
TTTTTTTTTTCTCGAGTTATCATACGTACACAACAGACTGTTGTATTTTC
AATAACAACAAGCTCTGTCTCATCACCGCAATCCGAAACACGCCCAGAGA
CAAAAAAAGACCCCAAAACGTTCTTCAATTTCGTGACGGAGCAAGTAAGA
AGAGTTTTAGCACAATTTCCTTGTTGCTTGCTGCTGCCAGAAATGCCGGC
AGCTCTAATTCTACTACACATCAAGATATCACGGCGGCTGCTACTGCTGC
GCTGATTGGTAGAAGACAATTCGCACCACTACTTATTCTTCCCTAACCCA
TTGGCTATCTATAAATATACTTCTTCTGGTTGGCAAACACTCCAGACACA
TGACCATTGGTCACTCACACACGACTGGCAAACACTGCCTCCCAGCCTGC
CTTACCATCCATATCTGTTTATACCACCAACAATGGTTCCTACTCTTCCT
CCAATCAACCTCCGGAGAGAGTACTGCGCTGCGACCCGCGGCAGCACCCA
CTCCGTCGTTCACCATCTCACGTGCTTGCGCAACATCATTGATTGTGCGT
AATGGTTCAAGCAGCACCCATGTTTGCCAATATTTTTTGGTGCTCTCCGA
ACTGCAACCGGAACATGACTGCTGCTCCAGCACGAAGTCTTGCATCAATT
GGCTGCAAAGGAACTCGAACTCCGAGAAAGTTCCTGATCTCCACAGGGTG
GGCGCGGCCATCCACAAAGGCTAAACACCAAACTCTACCTGGCTGTACTG
CCCGCACCTGCTTTAAAAATAATACTTCAGTGCCCCCTGAACATCCCCAC
CAGGGGTGTTGGTGGCGTGCTCAAGAATAGCCAGCCCAGACTCAAGCTTT
GCAAGAATGTGATAAATGTTAACATCCCCAGAAGAGTTTTGTTCATCCGC
TCCAGGATTACAAGCTGTGTTTGGCAGCACTTTGTTTGCTGAAAAAGAAG
TTCTATTTGCTGATTACACTCTCTCACTACATAGTGCGTTTGCAGACCTC
CTTCTCAGGAACTTTTTTAGGCTGTGCAGTAGCCACCCCATTGATTTGCT
TTTGCTGAAAAAGCTCGTTATCTTACCAAAGTTCGCATTGATGTTGTCCT
TCCACATATTTCATTTTGTCATTGGAGTTTTCTGCCTTCTTGCCATCACC
TCTTGCTCAGCCCTCCCAAGTAGTCGTGGAAAAGATGTTGTGCAAAAGAT
GAGGGCTGAGCAAGTGGCGATGACAAGACGACAGAAAACAGCAATGACAA
AAGAAATTATGTGAAGGACAACATCAAAATGTGAACTCTGGAAAGAAATA
ATGAGCCTTTTCCAGCGAAAGTAAATCGATGGGGTGGCTATACTGCACAG
CCTACAGAAGATGCTGAAAAAGAGGTCTCCAAACACACTATGTGAGTAGA
AAGTGCAATCAACAAATAGAACTTATTTTTCAGCAAACAAAGTATGCTAC
CAAACAAAGCTTGTAATTCTGGAGCGGATGAACAAAACTCTTCTGGGGAT
GTTAACATTTATCACATTCTTGCAAAGCTTGAGTCTGGGCTGGCTGTTCT
TGAACACACCACCAACACCCCTGGTGGGGATGTTCAGGGGGGCACTGAAG
TATTATTTTTTAAGCAGGTGCGGGCAGCACAACCAGCAGGTAGCTTGGTG
TTTAGCCTTGTGGATGGCCCCGCCTACCCTGCGGAGATCTGGAACATTAT
CGGAGTTCGAGTTGCTCTGCAGTCAATTCATGCAAGACTTTGTGCAGTTC
GAGTTGCTAGGGAGTTGGGCGGAAGATCAACTGGTCTCAGTTGATAAATG
TGCTGTTGGCGTGCTGCAGCCAGCCGAGCTGATCTCCGAGGTTTAAGAAA
GAAAAAGACGGCTGCCAGGAGAATGTTAAACAACATACAAGAGGAAGAAT
AATAGAGAGAGGAGGGGGGAGGAGGAGGGATAAGTAGTAGGTAGTAGGTA
GCCACTCTTGCCATCCATCTTGTCCCCTCCCTGTGGGGTGGTCTTCCAAC
ACGACTGCGACACGCGTGCCTCCATTTCATCAAACACTCGGTTTTACTTT
TTGGAGGAAAATAGATCGACACTCGTGGTTTTATATTTTGTCTTGGGCTC
TTTTGATTTTTAAATATGAAAATATCTTATAGCCAATCACAGAATATCAG
GAAAGGTAAAGATGTTTTTCTCAGCCAATCAAAAAATTATATCAATGCAG
GTGCTACTGCTGCTGCTGCTGATGATGATGCTCCTCATTCTCCTCATTCT
GTTGTTGGTGCAGCAGAAGCAGCAGCAGAATAGTCGGAAATGAGCAAGTT
CGAAACAACAATTCTTTCTCAAGCTTCAAGCTGACAATCGGATGCATTCC
TCTTGCGGAGTCTCGAGGCCCAATCCCCGAAACGTTCGTATTAACTGGCC
CCGCTTGCACTGGGTCTACCTTCTCACCTTTCTGACTGTCAAAAATGTGT
GTGTGTGTTTTTTGGTGCCTCCGCTTTGAGTGGGAGCGCCTTCATTTGAG
CAGAAGTTTTGAAAAAAAAATGGTGGAAGCCCTGCACATTGTCAACTTGA
CAGCTTCGGCAAACTCGATAGGTTTCACATTTATCATTGGACTCTGGGAG
TGATATCGCAGGAAACACGCCCCGCCCCAGTCGTTTAGCCCAAGCAGCCT
GGGCACAGCGAGCAGGAAGCGCTTGTCATTCTGGATACATACACCGAGCG
TGGTCGGCCTCCTGCAAACAGCAGTGGGcGCGGCCTCGCGCCCGGCCCAC
TGCTGCGGGGTTTACCACCATCCATATCTGTATACGTATACCACCAACGA
TGGTTCCTCCTCTTCTCTTTCACTCCAATCAACCTCCGGAGAGAGTGCTG
CGCTGCGACCCGCGGCAGCGCCCACTCCGTCGGCCATCATCTCTCGTGCT
CGCGCAACATCATTGATTGTATGTAATTGTTCAAGTAGCATCCATGTTTG
CCAATATATTTTTTTGGGCTCTCCGAACTGCAACCGGTACCTGATTTCTG
CTTTAGCATGAAGTTTTACATCAATTGACTGTACAGCATTTCGAACTCGA
TAATGTCCCTGATCTCCACAGGGTAGGCGCGGCCATCCACAAGGCTAAAT
ACCAATCTACCTGGCTGTGCTGTCTGCACCTGCTATAAAAATAATACTTC
AGTGCCCCCTGAACATCCCCACCAGGGGTGTTGGTGGTTTGTTCAAGAAC
AGCCAGCCCAGACTCAAGCTTTCCAAGAATGTAAGAAATGTTAACATCCC
CAGAAGAGTTTTGTTCATCCGCTCCAGGATTGCAAGTTGTGTTTGGCAGC
ACTTTGCTTGCTGAAAAAGAATTTGAGTTTGTTGGTTTCACTTTCTCACT
ATAGTGGGATTGCAAACCTCTTTTTCAGCGTCTTCTGTAGGCTGTGCAGT
AGCAACCTCATTGATTTGCTTTCGCTGTAAAAAAGCCCGTTATCTTCCCT
GTTTCAAATTGATGTTGTTGTCCTTCCACATTTTTTTTGTCATTGCTGTT
TTCTGCCTTCTTGCCATCACCGCTTGCTCAGCCCTCCACAGTAGTGGTGG
AAAATATGTTGTGCAAAAGATGAGGGCTCAGCAAGCGGTGATGGCGAGAA
GGCAGAAAACAGCGATGGCAAAAAACATGTGGAAGGACAACATCAATGTG
AACTCTGGAAAAAAAACGAACTTTTTCCAGCGAAAACAGATCGATCGGGT
GGCTACTGCACAGCCTTTACAGAAGATGCTGGAAAAGAAGTCTCCAAACA
CACTTGATGTGAGTGAGGAAGTGCAATCAACGAGTAGAACTTCTTTTTCA
GTAACAAACAAAGTGGTACCAAATACAGCTTGCAATTCTGAAGCGGATGA
GCAAAACTGTTTTGGGGATGTTAACATTTCTTACATTCTTGGAAAGCTTG
AGTCTGGGCTGGCTGTTCTTGAGCACACCACCAACACCCCTGGTGGGGAT
ATTCAGGGGGTACTGAAGTATTATTTGCTAAGCAGGTGCGGGCAGTGCAG
CCAGGTAGCTTGGAGTTTAGCCTGGTGGATAGCCCCCCCTACCCTGTGGA
CATTAGGAACATATTGGAGTTCGAGTTGCTTTGCAGCCAATTGATGCATG
ACTTCGTGCTGGAGCAGCAGTCAGGTACGGTTGCAGTTCGAAGAACACCA
AAAAAATCTAAGCAAACATGGATACGCTGATTGGACAATTATGGTTTTAT
TAACAATAATATATGTAGTAGTATTTTTATAGTTTCTCATTGAATGAACA
TGAAGGCCTGACATTAATAATATTATTGATGGAGTTGGTTCCTACCATAC
TGAACTGATACCTGCTGCTCATAGCAGTGTCCATCAACTCTTCATAGCCG
CTTGAGCTATATCATGAATAACAAAGAAAAGACTGCTGCCAGGAGGATGT
TAAACATAGAAGAGGAAAGAACAATAGAGAAAGGAGGAGGAGGATGGATG
ACTAGTAGGTAGTAGGTAGCCACCACTTGCCAACTCTTCCCCTCCCTGTG
GAGTGGTCTTTTTTTGATAGCATCACATTGTCAACTTGACAGCTTCGGCA
AACTCGATAGGTTTCACATTTATCATTGGACTCTGGGAGTGATATCGCAG
GAAACACGCCCCGCCCCAGTCGTTCAGCCCAAGCAGCCCGGGCACGGCAA
GCAGGAGGCGCTGTCATTCTGGATACATACACCGAGCGTGGTCGGCCTCC
TGCAAACAGCAGTGGGCGCGGCCTCGCGCCGGGCCCACTGCTGCGGGGTT
TACCACCATCCATATCTGTATACGTATACCACCAACGATGGTTCCTACTC
TTCTTCTTCCCCTCCAATCAACCTCCGGAGAGAGTGCCGCGCTGCGACCC
GCGGCTGCGCCCACTCCGTCGGCCATCATCTCATGTGCTCACGCAACATC
ATTGGTTGTATGTAATGGTTCAAGCAGCATCCATGTTTGCCAATATTTTT
TGGTGCTCTCCGAACTGCAACCGGTACCTGACTGCTGCTCTAGCACGAAG
TCTTGCATCAATTGGCTGCAAAGCAACTTGATCTCCTATGATGTTCCTGA
TATCCACAGGGTAGGCGGGGCCATCCACAAGAGTCTAAACACCAAGCTAC
ATACCTGGCTGTACTGCCCGCACCTGCTTTACAAACAATACTTCAGTGCC
CCCCCCTGAACATCCCCACGAGGGTTGTTGGTGGTGTGCTCAAGATCAGC
CAGCCCAGACTTAAGCTTTCCAAGAATGTAAGCAATGTTAACATCCCCAG
AAGAGTTTTGTTCGTCCGCTCCAGGATTGCAAGTTGTGTTTGGCAGCCCT
CTGTTTGCTGAAAAAGAAGTTCTATTTGTTGATTGCACTTTCTCACTATG
GTGAGATTGGAGACCTATTTTTCAGCATCTTTTTTTTTTTTTTTTTTTTT
TTGTCACGTAGTACACACCATGCTTCATGCTCTTCATGGTGCGGTCAGTC
CCCATATCTTTGACCGGTGTTACTTTTTGACTGTGCGAGATCGCACCGTC
GATACTTGCGGGATAATTCCGTCAGGCGTGGCGCTTATCCGGGTCTAGGG
CCGCCTGGTCCGTGATCATTCTTGTCTCCGTCGACATTCCCCCCCAATCG
TTCAATTGTTCGTATTCTCGAATTGAAGCATCGTTCGGCCGAACCAATCT
TCTGTAGGCTGTGCAGTATAGCAACCCCATCGATTTCCTTTGTCTGTAAA
AACCCGTTATCTTCCCTGTTTAGAATTGATGTTGTTGTCCTTCCACATTT
TTTTTGTCATTGCTGTTTTCTGCCTTCTTGCCATCACCGCTTGCTCAGCC
CTACCAAGTAGTCGTGGAAAATATGTTGTGCAAAAATGAGGGCTGAGCAA
GCGGTGATGGCGACAAGGCAGAAAACAGCGATGGCAAAAAACATGTGGAA
GGACAACATTAATGCAATGCGAACTCTGGAAAGATAACGAACTTTTTTCA
GCGATTACAGGTCGATGGGGTGGCTACTGCACAGCCTACAGAAGATGCTA
AAGAATAGGTCTCCAAACAAACTATGTGAGTGAGAACGTGCGATAAAAAA
ACAGAACTTCTTTTTCACCAACAAACAAAGTGCTACCAAACACAGCTTGC
AATTCTGGAGCGGATGAACAAAACTCTTTTGGGGATGTTAACATTTCTCA
CATTCTTGGAAAGCTTCTTTTCTGGGCTGGCTTTTCTTGAGCACACCACC
AACACCCCTGGTGGGGATCTTCAGGGGGGCACTTTAAGCAGGTGCGGGCA
GCACAGCCAGGTAGCTTGGAGATTAGCCTTGTGGATGGCCCCGCCTAGCC
TGTAGACATCAGGAACCTATTGGAGTTCGATTTGCTTCGCAGCAAGTTGA
TGCAAGACTTCGTGCTGGAGCAGCAGTCAGGTACGGTTGCAGTTCGAAGG
GCACCAAAAAATCTAAGCAAACATGGATGCTGATTGGACAAAAATTAATT
ATTATTAATATTAATAATATATATAGTATTTTATAGTTCTCGTTGAATGA
ACATGAAGGCTTGATATGTGTGTGTGTGCGCGCGCCCAGCTGGTGAGCGT
GCAGCTGGACGCGGTGCGCACGCTGGACGACTACCTGGAGCTGCCCGTGT
GGAAAAGCTGCTGGTCCTACCTCTCGCGCGCCCTCGGCGTGCTGGAGGCG
CACCCCAAGCTCACCCTCGGCGCCATCAGGTGACCCACCGCGCGCGCGCC
CCTCCCCCAGGAACTTTCCAGGAAAGGTCCGGGGGGGCTTGCCATCGGGG
ACGGGGAGAACCTCTATACTCGTGTCAAGAAGACATTGGTTGTGGCTCAG
GAAGTGAGAGGAGCACATTGCATGGTACaAAAACGtaTAGACAAAAAAAA
AAAAAAAAAAAAGCGGTGGTCCCTGGCGCCATCAGGTAACCGCATCCGAA
CTGCCGGGCCTTAAATACAAGTACACATCAAATACGTCATTTCGAAGCCG
AAACGTTCGTCGGTGGGCGGTCGATGCGCGGCCAGCGGCGGCGAACGGAA
GGCCGACGCGACGCTTCTCTGCCGCTCCCGCCTCGCGAGCTGCACCCCGA
TCGAAGCCGGAACGTCGCCCGTCCGGACGGACGGACGGACGGACGGCAGC
GGCAGCGAGTTCAACGCCCCCCTCCTGACTGACCAATCGGTTCGTCGCAC
CCCCTCCTGACTGACCAATCCGTTTGTCGCACCTCCTGACTGACCAATCC
GTTCGTCGCACCTGTTTGGCCAGCGAGGAGGACCTGGCGGACCTGGTGCT
GGCGGCGGCCAACCGGAAGGCGGGCCGCGAGAACCCCGCCGCCGCCGTGT
CCGAGAAGGAGCGCGCCGCTGAG back to topCoding sequence (CDS) from alignment at H-akashiwo_Contig947:186388..204960+ >mRNA_H-akashiwo_Contig947.5.1 ID=mRNA_H-akashiwo_Contig947.5.1|Name=mRNA_H-akashiwo_Contig947.5.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=930bp|location=Sequence derived from alignment at H-akashiwo_Contig947:186388..204960+ (Heterosigma akashiwo CCMP452)
ATGAACGGCCCCAACGCCAAGGGCCTGAACCGCATGAAGCTCGTGCTGCG
CAAGCACAACAAGCAGTACGAGGACCGCATCGCGGCCTTCCGCGAGAACC
CGGGGGGCGCGGAGGGGGAGGGGGGCAGCGCGAGCAGCAGCAGCAGCAGC
AGCGGCTCCGACTCGGACTCCTCCAGCTCGGGCTCCTCCAGCGGCTCCGA
CTCCGGGTCCGACAGCGACTCGGACAGCGGGTCGGAAAGCGACGCCTCCG
AGAAGAAGAAGAAGAAGCCGGCCTCCAAGCCCAAGAAGGACCTGGCGGAC
CTGGACTCCGACGAGTGGCCCTCGGACGCGGAGTCCGACTCGGACAGCAG
CGACGGCGAGGAGGCCGAGCTCAAGGCCTCAAGTCTGGGTGAAAAAAGGT
GCCGGCGGGGGCCGAAGAAGAAGGAGAAGGGGCGGGGAAGGACAAGGGAG
GCGGGCGCTGCAGCTCGCCCGGGCAGGAGGAGGTTTAGCGCCAAGGAGGC
GGCCAAGGCCAAGGAGCTGGCGCTGGACGCCAACCTCACCGCCGCGGACC
TCGAGCAGAAGGTGCTGGAGGCGGCGGCGGCGCGCGGGCGCAGCAAGACG
GACGCCAAGGCGCTGCTGAAGCGGCTGGGCGCGCTGGCCTACCTGGCGCG
GCGGTTCGGCCCCCGCAAGGAGCTGCCCGTGCTCTTCCAGCTGGTGAGCG
TGCAGCTGGACGCGGTGCGCACGCTGGACGACTACCTGGAGCTGCCCGTG
TGGAAAAGCTGCTGGTCCTACCTCTCGCGCGCCCTCGGCGTGCTGGAGGC
GCACCCCAAGCTCACCCTCGGCGCCATCAGCGAGGAGGACCTGGCGGACC
TGGTGCTGGCGGCGGCCAACCGGAAGGCGGGCCGCGAGAACCCCGCCGCC
GCCGTGTCCGAGAAGGAGCGCGCCGCTGAG back to top
|