mRNA_H-akashiwo_Contig947.1.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig947.1.1 vs. uniprot
Match: A0A7S3Y8S8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8S8_HETAK) HSP 1 Score: 555 bits (1431), Expect = 5.040e-197 Identity = 280/301 (93.02%), Postives = 287/301 (95.35%), Query Frame = 1 Query: 1 KVIFVGDFNGHNEKWLTSQKNNQLGLKLEEFCQMSGLENMVKQPTREDAFLDLILTPGDGKVHILPKLGSSDHCTIYAELDLGLVGIEEPPKQRKVFHWGKARWGELKKEVKKTDFNFEGLGVQEAVDTVTAKLQELTDKYVPSSVPTLSRPLLWWDAKFERAWRRKKRAHLDGGCPDAIRKETKICDRVCRKAYGRHVLRLKIRLARASGSRDFWKLTKHLSGGMSTRKRTAAPSPQALADYFAAKMSLPREENKQVPPLEQLPGGAKRLRSFKLTRAMVAKVLRSLNELKSVGPDGVSP 903 KVIFVGDFNGHN KWLTS+K+NQLGLKLEEFCQMSGLEN+VKQPTRE AFLDLILTPGDGKVHILPKLGSSDH TIYAELDLGLVGIEEPPKQRKVFHWGKARWGELKKEVKKTDFNFEGLGVQEAVDTVTAKLQELTDKYVPSSVPTLSRPL WWDAK ERAWRRKKRAHLDGGCP AIRKETKIC+RVCRKAYGRHVLRLKIRLARASGSRDFWKLTKHLSG MSTRKRTA PSPQALADYFAAKMSLP EENKQVPPLEQLP GAKRLRSFKLTRAMVA+VLR LN L+ VG +GVSP Sbjct: 116 KVIFVGDFNGHNVKWLTSEKDNQLGLKLEEFCQMSGLENVVKQPTREKAFLDLILTPGDGKVHILPKLGSSDHRTIYAELDLGLVGIEEPPKQRKVFHWGKARWGELKKEVKKTDFNFEGLGVQEAVDTVTAKLQELTDKYVPSSVPTLSRPLPWWDAKCERAWRRKKRAHLDGGCPHAIRKETKICNRVCRKAYGRHVLRLKIRLARASGSRDFWKLTKHLSG-MSTRKRTATPSPQALADYFAAKMSLPGEENKQVPPLEQLPDGAKRLRSFKLTRAMVARVLRFLNGLELVGANGVSP 415
BLAST of mRNA_H-akashiwo_Contig947.1.1 vs. uniprot
Match: A0A7S3Y8Z6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8Z6_HETAK) HSP 1 Score: 288 bits (737), Expect = 1.480e-89 Identity = 151/306 (49.35%), Postives = 207/306 (67.65%), Query Frame = 1 Query: 1 KVIFVGDFNGHNEKWLTSQK-NNQLGLKLEEFCQMSGLENMVKQPTREDAFLDLILTPGD--GKVHILPKLGSSDHCTIYAELDLGLVGIE-EPPKQRKVFHWGKARWGELKKEVKKTDFNFEGLGVQEAVDTVTAKLQELTDKYVPSS-VPTLSRPLLWWDAKFERAWRRKKRAHLDGGCPDAIRKETKICDRVCRKAYGRHVLRLKIRLARASGSRDFWKLTKHLSGGMSTRKRTAAPSPQALADYFAAKMSLPREENKQVPPLEQLPGGAKRLRSFKLTRAMVAKVLRSLNELKSVGPDGVSP 903 + + +GDFN H+++WL S N+ G+KL++F ++ GL N+V +PTR LDL+ P D GKV +L K+G+SDH + LDLG+ GI+ + RKV+HW A + E++ E KKT F+F L VQ++VD VT+ + +TDK+VPS + ++P+ WW + AW RK++A GC I + TK C +VCR+A+ +H LRLKIRLARA GSR+FW+ K SG ++R AAP LA YFA KMSLP EE K+VPPLE P G+++LR FK+TRA V+KVLRSL+ KSVGPDGVSP Sbjct: 32 RAVILGDFNAHHQEWLKSASVTNKRGMKLKQFSELHGLINLVHKPTRGKNMLDLVFVPSDAEGKVEVLAKIGTSDHKALKVSLDLGMEGIQIQEAPGRKVYHWSSANYREMQVEFKKTSFDFSHLSVQQSVDLVTSTINAVTDKHVPSVLISGTTKPIAWWTPYCQWAWERKQKA-FKSGCKVCIMRATKCCVQVCRRAFNQHQLRLKIRLARAKGSREFWQTVKTYSGRGGGQRRKAAPPADDLAKYFATKMSLPGEEGKEVPPLEPAPPGSRKLRGFKITRAGVSKVLRSLDVNKSVGPDGVSP 336
BLAST of mRNA_H-akashiwo_Contig947.1.1 vs. uniprot
Match: A0A7S3Y8N4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8N4_HETAK) HSP 1 Score: 288 bits (737), Expect = 7.260e-88 Identity = 151/306 (49.35%), Postives = 207/306 (67.65%), Query Frame = 1 Query: 1 KVIFVGDFNGHNEKWLTSQK-NNQLGLKLEEFCQMSGLENMVKQPTREDAFLDLILTPGD--GKVHILPKLGSSDHCTIYAELDLGLVGIE-EPPKQRKVFHWGKARWGELKKEVKKTDFNFEGLGVQEAVDTVTAKLQELTDKYVPSS-VPTLSRPLLWWDAKFERAWRRKKRAHLDGGCPDAIRKETKICDRVCRKAYGRHVLRLKIRLARASGSRDFWKLTKHLSGGMSTRKRTAAPSPQALADYFAAKMSLPREENKQVPPLEQLPGGAKRLRSFKLTRAMVAKVLRSLNELKSVGPDGVSP 903 + + +GDFN H+++WL S N+ G+KL++F ++ GL N+V +PTR LDL+ P D GKV +L K+G+SDH + LDLG+ GI+ + RKV+HW A + E++ E KKT F+F L VQ++VD VT+ + +TDK+VPS + ++P+ WW + AW RK++A GC I + TK C +VCR+A+ +H LRLKIRLARA GSR+FW+ K SG ++R AAP LA YFA KMSLP EE K+VPPLE P G+++LR FK+TRA V+KVLRSL+ KSVGPDGVSP Sbjct: 32 RAVILGDFNAHHQEWLKSASVTNKRGMKLKQFSELHGLINLVHKPTRGKNMLDLVFVPSDAEGKVEVLAKIGTSDHKALKVSLDLGMEGIQIQEAPGRKVYHWSSANYREMQVEFKKTSFDFSHLSVQQSVDLVTSTINAVTDKHVPSVLISGTTKPIAWWTPYCQWAWERKQKA-FKSGCKVCIMRATKCCVQVCRRAFNQHQLRLKIRLARAKGSREFWQTVKTYSGRGGGQRRKAAPPADDLAKYFATKMSLPGEEGKEVPPLEPAPPGSRKLRGFKITRAGVSKVLRSLDVNKSVGPDGVSP 336
BLAST of mRNA_H-akashiwo_Contig947.1.1 vs. uniprot
Match: A0A452I8L2_9SAUR (Reverse transcriptase domain-containing protein n=2 Tax=Gopherus agassizii TaxID=38772 RepID=A0A452I8L2_9SAUR) HSP 1 Score: 74.3 bits (181), Expect = 3.960e-11 Identity = 83/323 (25.70%), Postives = 147/323 (45.51%), Query Frame = 1 Query: 1 KVIFVGDFNGHNEKWLTSQKNNQLGLKLEEFCQMSGLENMVKQPTREDAFLDLILTPGDGKVHIL---PKLGSSDHCTIYAELDLGLVGIEEPPKQRKVFHWGKARWGELKKEVKKTDFNFE--GLGVQEAVDTVTAKLQELTDKYVP----SSVPTLSRPLLWWDAKFERAWRRKKRAHLD---GGCPDAIRKETKICD-RVCRKAYGRHVLRLKIRLARA--SGSRDFW------KLTKHLSGGMSTRKRTAAPSPQALADYFAAKM-SLPREENKQVPPLEQLPGGAKRLRSFKLTRAMVAKVLRSLNELKSVGPDGVSP 903 K + +GDFN + W TS N + L +V++PTR DA LDL+L + + + LGSSDH I +LD I + +VF + +A + EL+K V++ D+ E L +EA + ++LQ+L++ +P ++ RP W ++K++A+ + GG I KE+ + + R CR + ++++ LA+ + S+ F+ K K G ++T +A Y S+ + N+++ ++ G + + +T + V L LN KS GPD + P Sbjct: 154 KCVIMGDFNFPDIDWSTSASKNSRDQIFLDVIADGFLHQVVEEPTRGDAILDLVLVSSEDLIEEMVVGDNLGSSDHELIQFKLD---GRINKNRSGTRVFDFKRANFKELRKLVREVDWTEELVDLNAEEAWNYFKSQLQKLSEACIPRKGKKTIGRSCRPS-WMSKHLREVIKKKQKAYKEWKKGG----ISKESYLSEVRTCRDKVRKAKSQVELDLAKGIKTNSKRFYSHINKKKTKKEEVGPLNTEDGMEVKDNLGMAQYLNKYFASVFNKANEELRDNGRMTNGNEDM-EVDITTSEVEAKLEQLNGTKSEGPDNLHP 467
BLAST of mRNA_H-akashiwo_Contig947.1.1 vs. uniprot
Match: K7EZP0_PELSI (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Pelodiscus sinensis TaxID=13735 RepID=K7EZP0_PELSI) HSP 1 Score: 64.3 bits (155), Expect = 5.060e-8 Identity = 78/307 (25.41%), Postives = 134/307 (43.65%), Query Frame = 1 Query: 7 IFVGDFNGHNEKWLTSQKNNQLGLKLEEFCQMSGLENMVKQPTREDAFLDLILTPGDGKVHIL---PKLGSSDHCTIYAELDLGLVGIEEPPKQRKVFHWGKARWGELKKEVKKTDFNFE--GLGVQEAVDTVTAKLQELTDKYVPSS----VPTLSRPLLWWDAKFERAWRRKKRAH----LDGGCPDAIRKETKICDRVCRKAYGRHVLRLKIRLARASGSRDFW------KLTKHLSGGMSTRKRTAAPSPQALADYFAAKM-SLPREENKQVPPLEQLPGGAKRLRSFKLTRAMVAKVLRSLN 867 + +GDFN + W TS N+ + L +V +PTR DA LDL+L + + + LGSSDH I +L+ I + + +VF + +A + +L+K V++ D+ E L V+EA + KLQ+L++ +P + RP W ++K++A+ + G ++ E + C RKA + L L R+ + S+ F+ K K G + T+ +A Y S+ E N+++ +L G K + +T + V L LN Sbjct: 57 VIMGDFNFPDIDWRTSASNSNRAQIFLDVIADEFLHQVVAEPTRGDAILDLVLVSSEDLIDEMVVGDNLGSSDHELIQFKLN---GRINKNKSETRVFDFKRANFSKLRKFVREVDWTKEIMDLKVEEAWNYFKLKLQKLSEACIPRKGKKFIGRCVRPS-WMSKHLREVIKKKQKAYKEWKMGGISKESYLIEVRACRDKVRKAKSQVELDLAKRIK--TNSKRFYSHINRKKTKKEEVGPLITKDGVEVKDNLGMAQYLNKYFASVFNEANEELRDNGKLTNGTKAM-EVDITISEVKAKLEQLN 356
BLAST of mRNA_H-akashiwo_Contig947.1.1 vs. uniprot
Match: A0A8C5LY40_9ANUR (Reverse transcriptase domain-containing protein n=6 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5LY40_9ANUR) HSP 1 Score: 64.3 bits (155), Expect = 7.970e-8 Identity = 83/328 (25.30%), Postives = 148/328 (45.12%), Query Frame = 1 Query: 1 KVIFVGDFNGHNEKWLTSQK---------NNQLGLKLEEFCQMSGLENMVKQPTREDAFLDLILTPGD--GKVHILPKLGSSDHCTIYAELDLGLVGIEEPPKQRKVFHWGKARWGELKKEVKKTDFNFEGL-GVQEAVDTVTAKLQELTDKYVPS-SVPTLSRPLLWWDAKFERAWRRKKRA--HLDGGCPDAIRKETKICDRVCRKAYGRHVLRLKIRLARA--SGSRDFWKLT---KHLSGGM---STRKRTAAPSPQALAD----YFAAKMSLPREENKQVPPLEQLPGGAKRLRSFKLTRAMVAKVLRSLNELKSVGPDGVSP 903 +VI +GDFN + W T N+ LGL L +V++PTR++A LDLILT G V + LGSSDH +++ + G+E + KV + K + +++ VK++ ++ L GVQE D + L + T ++ S + LW+ A+ + + KK A + + R+ KI + ++ + ++A++ G + F++ + + G+ T++ ++LAD YF + + EE + P QL K +++ T V + L + KS+GPDG+ P Sbjct: 111 EVIIMGDFNLPDVNWKTKTAGCTRSTNILNSLLGL---------SLTQVVEEPTRKEAILDLILTNGGLVSDVVVGENLGSSDHQSVWFNIT---TGMEPHHTRTKVLDFKKTDFSKMRFCVKESLSDWRSLKGVQEKWDYLKEALLKATGNFIRLVSKNKKGKKPLWYSAEVAKIVKNKKTAFNNYKTTQSEEDRQTYKIRQKEAKQFIRASKAHAEEKIAQSVKKGDKTFFRYINEKRKVKQGLVRLKTKEGRYVEEDKSLADCLNEYFCSVFA---EEKEGKGP--QLGENTKETFTYQFTEEEVLQQLSKVKTNKSMGPDGIHP 421
BLAST of mRNA_H-akashiwo_Contig947.1.1 vs. uniprot
Match: K7EYV3_PELSI (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Pelodiscus sinensis TaxID=13735 RepID=K7EYV3_PELSI) HSP 1 Score: 63.5 bits (153), Expect = 9.250e-8 Identity = 47/146 (32.19%), Postives = 75/146 (51.37%), Query Frame = 1 Query: 7 IFVGDFNGHNEKWLTSQKNNQLGLKLEEFCQMSGLENMVKQPTREDAFLDLILTPGDGKVHIL---PKLGSSDHCTIYAELDLGLVGIEEPPKQRKVFHWGKARWGELKKEVKKTDFNFE--GLGVQEAVDTVTAKLQELTDKYVP 429 I +GDFN + W TS NN + L +V +PTR DA LDL+L + + + LGSSDH I +L+ I + + +VF + +A + +L+K V++ D+ E L V+EA + KLQ+L++ +P Sbjct: 197 IIMGDFNFPDIDWRTSASNNNRAQIFLDVIADEFLHQVVAEPTRGDAILDLVLVSSEDLIDEMVVGDNLGSSDHELIQFKLN---GRINKNKSETRVFDFKRANFNKLRKLVREVDWTKEIMDLKVEEAWNYFKLKLQKLSEACIP 339
BLAST of mRNA_H-akashiwo_Contig947.1.1 vs. uniprot
Match: A0A8C5MKL7_9ANUR (Reverse transcriptase domain-containing protein n=3 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5MKL7_9ANUR) HSP 1 Score: 61.6 bits (148), Expect = 6.470e-7 Identity = 82/325 (25.23%), Postives = 146/325 (44.92%), Query Frame = 1 Query: 1 KVIFVGDFNGHNEKWLTSQK---------NNQLGLKLEEFCQMSGLENMVKQPTREDAFLDLILTPGD--GKVHILPKLGSSDHCTIYAELDLGLVGIEEPPKQRKVFHWGKARWGELKKEVKKTDFNFEGL-GVQEAVDTVTAKLQELTDKYVPS-SVPTLSRPLLWWDAKFERAWRRKKRA--HLDGGCPDAIRKETKICDRVCRKAYGRHVLRLKIRLARA--SGSRDFWKLT---KHLSGGM---STRKRTAAPSPQALADYFAAKM-SLPREENKQVPPLEQLPGGAKRLRSFKLTRAMVAKVLRSLNELKSVGPDGVSP 903 +VI +GDFN + W T N+ LGL L +V++PTR++A LDLILT G V + LGSSDH +++ + G+E + KV + K + +++ VK++ ++ L GVQE D + L + T + S + LW+ A+ + + KK A + + R+ KI + ++ + ++A++ G + F++ + + G+ T++ ++LAD + S+ EE + P QL K +++ T V + L + KS+GPDG+ P Sbjct: 6 EVIIMGDFNLPDVNWKTKTAGCTRSTNILNSLLGL---------SLTQVVEEPTRKEAILDLILTNGGLVSDVVVGENLGSSDHQSVWFNIT---TGMEPHHTRTKVLDFKKTDFSKMRFCVKESLSDWRSLKGVQEKWDYLKEALLKATGNCIRLVSKNKKGKKPLWYSAEVAKIVKNKKTAFNNYKTTQSEEDRQTYKIRQKEAKQYIRASKANAEEKIAQSVKKGDKTFFRYINEKRKVKQGLVRLKTKEGRYVEEDKSLADCLNEYICSVFAEEKEGKGP--QLGENTKETFTYQFTEEEVLQQLSKVKTNKSMGPDGIHP 316
BLAST of mRNA_H-akashiwo_Contig947.1.1 vs. uniprot
Match: A0A8B9SLS9_ANAPL (Reverse transcriptase domain-containing protein n=2 Tax=Anatinae TaxID=2068716 RepID=A0A8B9SLS9_ANAPL) HSP 1 Score: 61.2 bits (147), Expect = 8.210e-7 Identity = 82/324 (25.31%), Postives = 136/324 (41.98%), Query Frame = 1 Query: 4 VIFVGDFNGHNEKWLTSQKNNQLGLKLEEFCQMSGLENMVKQPTREDAFLDLILTPGDGKVH---ILPKLGSSDHCTIYAELDLGLVGIEEPPKQRKVFHWGKARWGELKKEVKKTDFN--FEGLGVQEAVDTVTAKLQELTDKYVPSSVPTLS---RPLLWWDAKFERAWRRKKRAHLDGGCPDAIRKETKICDRVCRKAYGRHVLRLKIRLARA--SGSRDFWKL--TKHLS-----------GGMSTRKRTAAPSPQAL-ADYFAAKMSLPREENKQVPPLEQLPGGAKRLRSFKLTRAMVAKVLRSLNELKSVGPDGVSP 903 ++ VGDFN + W + + + E + S L ++ +PTR A LDL+ T +G V + LG SDH + + L G + + V + +A + L+ V + +G GVQE ++ ++ +P P +S R W + + RRKKR + A R++ K R+CR + L+++LA A + F+K TK + G + TR A A A F+ K + Q P L + G + + + +V +LR L+ KS+GPDG+ P Sbjct: 122 LVLVGDFNFPDISWKHNTAQRKQSRRFLEKVEDSFLTQLISEPTRGGALLDLLFTNREGLVEDVIVGSSLGQSDHEMVEFSI---LGGARKGTSKTTVLDFRRADFRLLRTLVGGVPWEAVLKGRGVQEGWVLFKRQILMAQERSIPMC-PKMSHRGRRPAWLNRELWLELRRKKRVYNLWKIGQATREDYKDVARLCRDKIRKAKAHLELKLATAVKDNKKRFYKYINTKRRTKENLHPLLDAGGNLVTRDEEKAEVLNAFFASVFSGKTGCSLDT--QYPELVE--GDGELDVALTIHEELVGDLLRHLDVHKSMGPDGIHP 437
BLAST of mRNA_H-akashiwo_Contig947.1.1 vs. uniprot
Match: A0A8C5WI69_9ANUR (Reverse transcriptase domain-containing protein n=19 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5WI69_9ANUR) HSP 1 Score: 61.2 bits (147), Expect = 8.830e-7 Identity = 83/328 (25.30%), Postives = 146/328 (44.51%), Query Frame = 1 Query: 1 KVIFVGDFNGHNEKWLTSQK---------NNQLGLKLEEFCQMSGLENMVKQPTREDAFLDLILTPGD--GKVHILPKLGSSDHCTIYAELDLGLVGIEEPPKQRKVFHWGKARWGELKKEVKKTDFNFEGL-GVQEAVDTVTAKLQELTDKYVPS-SVPTLSRPLLWWDAKFERAWRRKKRA--HLDGGCPDAIRKETKICDRVCRKAYGRHVLRLKIRLARA--SGSRDFWKLT---KHLSGGM---STRKRTAAPSPQALAD----YFAAKMSLPREENKQVPPLEQLPGGAKRLRSFKLTRAMVAKVLRSLNELKSVGPDGVSP 903 +VI +GDFN + W T N+ LGL L +V++PTR++A LDLILT G V + LGSSDH +++ + G+E + KV + K + +++ VK++ ++ L GVQE D + L + T + S + LW+ A+ + + KK A + + R+ KI + ++ + ++A++ G + F++ + + G+ T++ + LAD YF + + EE + P QL K +++ T V + L + KS+GPDG+ P Sbjct: 73 EVIIMGDFNLPDVNWKTKTAGCTRSTNILNSLLGL---------SLTQVVEEPTRKEAILDLILTNGGLVSDVVVGENLGSSDHQSVWFNIT---TGMEPHHTRTKVLDFKKTDFSKMRFCVKESLSDWRSLKGVQEKWDYLKEALLKATGNCIRLVSKNKKGKKPLWYSAEVAKIVKNKKIAFNNYKTTQSEEDRQTYKIRQKEAKQFIRASKAHAEEKIAQSVKKGDKTFFRYINEKRKVKQGLVRLKTKEGRYVEEDKGLADCLNEYFCSVFA---EEKEGKGP--QLGENTKETFTYQFTEEEVLQQLSKVKTNKSMGPDGIHP 383 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig947.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig947.1.1 >prot_H-akashiwo_Contig947.1.1 ID=prot_H-akashiwo_Contig947.1.1|Name=mRNA_H-akashiwo_Contig947.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=301bp KVIFVGDFNGHNEKWLTSQKNNQLGLKLEEFCQMSGLENMVKQPTREDAFback to top mRNA from alignment at H-akashiwo_Contig947:32715..33617+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig947.1.1 ID=mRNA_H-akashiwo_Contig947.1.1|Name=mRNA_H-akashiwo_Contig947.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=903bp|location=Sequence derived from alignment at H-akashiwo_Contig947:32715..33617+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig947:32715..33617+ >mRNA_H-akashiwo_Contig947.1.1 ID=mRNA_H-akashiwo_Contig947.1.1|Name=mRNA_H-akashiwo_Contig947.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=903bp|location=Sequence derived from alignment at H-akashiwo_Contig947:32715..33617+ (Heterosigma akashiwo CCMP452)back to top |