mRNA_H-akashiwo_Contig947.1.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig947.1.1
Unique NamemRNA_H-akashiwo_Contig947.1.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig947.1.1 vs. uniprot
Match: A0A7S3Y8S8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8S8_HETAK)

HSP 1 Score: 555 bits (1431), Expect = 5.040e-197
Identity = 280/301 (93.02%), Postives = 287/301 (95.35%), Query Frame = 1
Query:    1 KVIFVGDFNGHNEKWLTSQKNNQLGLKLEEFCQMSGLENMVKQPTREDAFLDLILTPGDGKVHILPKLGSSDHCTIYAELDLGLVGIEEPPKQRKVFHWGKARWGELKKEVKKTDFNFEGLGVQEAVDTVTAKLQELTDKYVPSSVPTLSRPLLWWDAKFERAWRRKKRAHLDGGCPDAIRKETKICDRVCRKAYGRHVLRLKIRLARASGSRDFWKLTKHLSGGMSTRKRTAAPSPQALADYFAAKMSLPREENKQVPPLEQLPGGAKRLRSFKLTRAMVAKVLRSLNELKSVGPDGVSP 903
            KVIFVGDFNGHN KWLTS+K+NQLGLKLEEFCQMSGLEN+VKQPTRE AFLDLILTPGDGKVHILPKLGSSDH TIYAELDLGLVGIEEPPKQRKVFHWGKARWGELKKEVKKTDFNFEGLGVQEAVDTVTAKLQELTDKYVPSSVPTLSRPL WWDAK ERAWRRKKRAHLDGGCP AIRKETKIC+RVCRKAYGRHVLRLKIRLARASGSRDFWKLTKHLSG MSTRKRTA PSPQALADYFAAKMSLP EENKQVPPLEQLP GAKRLRSFKLTRAMVA+VLR LN L+ VG +GVSP
Sbjct:  116 KVIFVGDFNGHNVKWLTSEKDNQLGLKLEEFCQMSGLENVVKQPTREKAFLDLILTPGDGKVHILPKLGSSDHRTIYAELDLGLVGIEEPPKQRKVFHWGKARWGELKKEVKKTDFNFEGLGVQEAVDTVTAKLQELTDKYVPSSVPTLSRPLPWWDAKCERAWRRKKRAHLDGGCPHAIRKETKICNRVCRKAYGRHVLRLKIRLARASGSRDFWKLTKHLSG-MSTRKRTATPSPQALADYFAAKMSLPGEENKQVPPLEQLPDGAKRLRSFKLTRAMVARVLRFLNGLELVGANGVSP 415          
BLAST of mRNA_H-akashiwo_Contig947.1.1 vs. uniprot
Match: A0A7S3Y8Z6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8Z6_HETAK)

HSP 1 Score: 288 bits (737), Expect = 1.480e-89
Identity = 151/306 (49.35%), Postives = 207/306 (67.65%), Query Frame = 1
Query:    1 KVIFVGDFNGHNEKWLTSQK-NNQLGLKLEEFCQMSGLENMVKQPTREDAFLDLILTPGD--GKVHILPKLGSSDHCTIYAELDLGLVGIE-EPPKQRKVFHWGKARWGELKKEVKKTDFNFEGLGVQEAVDTVTAKLQELTDKYVPSS-VPTLSRPLLWWDAKFERAWRRKKRAHLDGGCPDAIRKETKICDRVCRKAYGRHVLRLKIRLARASGSRDFWKLTKHLSGGMSTRKRTAAPSPQALADYFAAKMSLPREENKQVPPLEQLPGGAKRLRSFKLTRAMVAKVLRSLNELKSVGPDGVSP 903
            + + +GDFN H+++WL S    N+ G+KL++F ++ GL N+V +PTR    LDL+  P D  GKV +L K+G+SDH  +   LDLG+ GI+ +    RKV+HW  A + E++ E KKT F+F  L VQ++VD VT+ +  +TDK+VPS  +   ++P+ WW    + AW RK++A    GC   I + TK C +VCR+A+ +H LRLKIRLARA GSR+FW+  K  SG    ++R AAP    LA YFA KMSLP EE K+VPPLE  P G+++LR FK+TRA V+KVLRSL+  KSVGPDGVSP
Sbjct:   32 RAVILGDFNAHHQEWLKSASVTNKRGMKLKQFSELHGLINLVHKPTRGKNMLDLVFVPSDAEGKVEVLAKIGTSDHKALKVSLDLGMEGIQIQEAPGRKVYHWSSANYREMQVEFKKTSFDFSHLSVQQSVDLVTSTINAVTDKHVPSVLISGTTKPIAWWTPYCQWAWERKQKA-FKSGCKVCIMRATKCCVQVCRRAFNQHQLRLKIRLARAKGSREFWQTVKTYSGRGGGQRRKAAPPADDLAKYFATKMSLPGEEGKEVPPLEPAPPGSRKLRGFKITRAGVSKVLRSLDVNKSVGPDGVSP 336          
BLAST of mRNA_H-akashiwo_Contig947.1.1 vs. uniprot
Match: A0A7S3Y8N4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8N4_HETAK)

HSP 1 Score: 288 bits (737), Expect = 7.260e-88
Identity = 151/306 (49.35%), Postives = 207/306 (67.65%), Query Frame = 1
Query:    1 KVIFVGDFNGHNEKWLTSQK-NNQLGLKLEEFCQMSGLENMVKQPTREDAFLDLILTPGD--GKVHILPKLGSSDHCTIYAELDLGLVGIE-EPPKQRKVFHWGKARWGELKKEVKKTDFNFEGLGVQEAVDTVTAKLQELTDKYVPSS-VPTLSRPLLWWDAKFERAWRRKKRAHLDGGCPDAIRKETKICDRVCRKAYGRHVLRLKIRLARASGSRDFWKLTKHLSGGMSTRKRTAAPSPQALADYFAAKMSLPREENKQVPPLEQLPGGAKRLRSFKLTRAMVAKVLRSLNELKSVGPDGVSP 903
            + + +GDFN H+++WL S    N+ G+KL++F ++ GL N+V +PTR    LDL+  P D  GKV +L K+G+SDH  +   LDLG+ GI+ +    RKV+HW  A + E++ E KKT F+F  L VQ++VD VT+ +  +TDK+VPS  +   ++P+ WW    + AW RK++A    GC   I + TK C +VCR+A+ +H LRLKIRLARA GSR+FW+  K  SG    ++R AAP    LA YFA KMSLP EE K+VPPLE  P G+++LR FK+TRA V+KVLRSL+  KSVGPDGVSP
Sbjct:   32 RAVILGDFNAHHQEWLKSASVTNKRGMKLKQFSELHGLINLVHKPTRGKNMLDLVFVPSDAEGKVEVLAKIGTSDHKALKVSLDLGMEGIQIQEAPGRKVYHWSSANYREMQVEFKKTSFDFSHLSVQQSVDLVTSTINAVTDKHVPSVLISGTTKPIAWWTPYCQWAWERKQKA-FKSGCKVCIMRATKCCVQVCRRAFNQHQLRLKIRLARAKGSREFWQTVKTYSGRGGGQRRKAAPPADDLAKYFATKMSLPGEEGKEVPPLEPAPPGSRKLRGFKITRAGVSKVLRSLDVNKSVGPDGVSP 336          
BLAST of mRNA_H-akashiwo_Contig947.1.1 vs. uniprot
Match: A0A452I8L2_9SAUR (Reverse transcriptase domain-containing protein n=2 Tax=Gopherus agassizii TaxID=38772 RepID=A0A452I8L2_9SAUR)

HSP 1 Score: 74.3 bits (181), Expect = 3.960e-11
Identity = 83/323 (25.70%), Postives = 147/323 (45.51%), Query Frame = 1
Query:    1 KVIFVGDFNGHNEKWLTSQKNNQLGLKLEEFCQMSGLENMVKQPTREDAFLDLILTPGDGKVHIL---PKLGSSDHCTIYAELDLGLVGIEEPPKQRKVFHWGKARWGELKKEVKKTDFNFE--GLGVQEAVDTVTAKLQELTDKYVP----SSVPTLSRPLLWWDAKFERAWRRKKRAHLD---GGCPDAIRKETKICD-RVCRKAYGRHVLRLKIRLARA--SGSRDFW------KLTKHLSGGMSTRKRTAAPSPQALADYFAAKM-SLPREENKQVPPLEQLPGGAKRLRSFKLTRAMVAKVLRSLNELKSVGPDGVSP 903
            K + +GDFN  +  W TS   N       +      L  +V++PTR DA LDL+L   +  +  +     LGSSDH  I  +LD     I +     +VF + +A + EL+K V++ D+  E   L  +EA +   ++LQ+L++  +P     ++    RP  W         ++K++A+ +   GG    I KE+ + + R CR    +   ++++ LA+   + S+ F+      K  K   G ++T           +A Y      S+  + N+++    ++  G + +    +T + V   L  LN  KS GPD + P
Sbjct:  154 KCVIMGDFNFPDIDWSTSASKNSRDQIFLDVIADGFLHQVVEEPTRGDAILDLVLVSSEDLIEEMVVGDNLGSSDHELIQFKLD---GRINKNRSGTRVFDFKRANFKELRKLVREVDWTEELVDLNAEEAWNYFKSQLQKLSEACIPRKGKKTIGRSCRPS-WMSKHLREVIKKKQKAYKEWKKGG----ISKESYLSEVRTCRDKVRKAKSQVELDLAKGIKTNSKRFYSHINKKKTKKEEVGPLNTEDGMEVKDNLGMAQYLNKYFASVFNKANEELRDNGRMTNGNEDM-EVDITTSEVEAKLEQLNGTKSEGPDNLHP 467          
BLAST of mRNA_H-akashiwo_Contig947.1.1 vs. uniprot
Match: K7EZP0_PELSI (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Pelodiscus sinensis TaxID=13735 RepID=K7EZP0_PELSI)

HSP 1 Score: 64.3 bits (155), Expect = 5.060e-8
Identity = 78/307 (25.41%), Postives = 134/307 (43.65%), Query Frame = 1
Query:    7 IFVGDFNGHNEKWLTSQKNNQLGLKLEEFCQMSGLENMVKQPTREDAFLDLILTPGDGKVHIL---PKLGSSDHCTIYAELDLGLVGIEEPPKQRKVFHWGKARWGELKKEVKKTDFNFE--GLGVQEAVDTVTAKLQELTDKYVPSS----VPTLSRPLLWWDAKFERAWRRKKRAH----LDGGCPDAIRKETKICDRVCRKAYGRHVLRLKIRLARASGSRDFW------KLTKHLSGGMSTRKRTAAPSPQALADYFAAKM-SLPREENKQVPPLEQLPGGAKRLRSFKLTRAMVAKVLRSLN 867
            + +GDFN  +  W TS  N+       +      L  +V +PTR DA LDL+L   +  +  +     LGSSDH  I  +L+     I +   + +VF + +A + +L+K V++ D+  E   L V+EA +    KLQ+L++  +P      +    RP  W         ++K++A+    + G   ++   E + C    RKA  +  L L  R+   + S+ F+      K  K   G + T+          +A Y      S+  E N+++    +L  G K +    +T + V   L  LN
Sbjct:   57 VIMGDFNFPDIDWRTSASNSNRAQIFLDVIADEFLHQVVAEPTRGDAILDLVLVSSEDLIDEMVVGDNLGSSDHELIQFKLN---GRINKNKSETRVFDFKRANFSKLRKFVREVDWTKEIMDLKVEEAWNYFKLKLQKLSEACIPRKGKKFIGRCVRPS-WMSKHLREVIKKKQKAYKEWKMGGISKESYLIEVRACRDKVRKAKSQVELDLAKRIK--TNSKRFYSHINRKKTKKEEVGPLITKDGVEVKDNLGMAQYLNKYFASVFNEANEELRDNGKLTNGTKAM-EVDITISEVKAKLEQLN 356          
BLAST of mRNA_H-akashiwo_Contig947.1.1 vs. uniprot
Match: A0A8C5LY40_9ANUR (Reverse transcriptase domain-containing protein n=6 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5LY40_9ANUR)

HSP 1 Score: 64.3 bits (155), Expect = 7.970e-8
Identity = 83/328 (25.30%), Postives = 148/328 (45.12%), Query Frame = 1
Query:    1 KVIFVGDFNGHNEKWLTSQK---------NNQLGLKLEEFCQMSGLENMVKQPTREDAFLDLILTPGD--GKVHILPKLGSSDHCTIYAELDLGLVGIEEPPKQRKVFHWGKARWGELKKEVKKTDFNFEGL-GVQEAVDTVTAKLQELTDKYVPS-SVPTLSRPLLWWDAKFERAWRRKKRA--HLDGGCPDAIRKETKICDRVCRKAYGRHVLRLKIRLARA--SGSRDFWKLT---KHLSGGM---STRKRTAAPSPQALAD----YFAAKMSLPREENKQVPPLEQLPGGAKRLRSFKLTRAMVAKVLRSLNELKSVGPDGVSP 903
            +VI +GDFN  +  W T            N+ LGL          L  +V++PTR++A LDLILT G     V +   LGSSDH +++  +     G+E    + KV  + K  + +++  VK++  ++  L GVQE  D +   L + T  ++   S     +  LW+ A+  +  + KK A  +      +  R+  KI  +  ++         + ++A++   G + F++     + +  G+    T++       ++LAD    YF +  +   EE +   P  QL    K   +++ T   V + L  +   KS+GPDG+ P
Sbjct:  111 EVIIMGDFNLPDVNWKTKTAGCTRSTNILNSLLGL---------SLTQVVEEPTRKEAILDLILTNGGLVSDVVVGENLGSSDHQSVWFNIT---TGMEPHHTRTKVLDFKKTDFSKMRFCVKESLSDWRSLKGVQEKWDYLKEALLKATGNFIRLVSKNKKGKKPLWYSAEVAKIVKNKKTAFNNYKTTQSEEDRQTYKIRQKEAKQFIRASKAHAEEKIAQSVKKGDKTFFRYINEKRKVKQGLVRLKTKEGRYVEEDKSLADCLNEYFCSVFA---EEKEGKGP--QLGENTKETFTYQFTEEEVLQQLSKVKTNKSMGPDGIHP 421          
BLAST of mRNA_H-akashiwo_Contig947.1.1 vs. uniprot
Match: K7EYV3_PELSI (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Pelodiscus sinensis TaxID=13735 RepID=K7EYV3_PELSI)

HSP 1 Score: 63.5 bits (153), Expect = 9.250e-8
Identity = 47/146 (32.19%), Postives = 75/146 (51.37%), Query Frame = 1
Query:    7 IFVGDFNGHNEKWLTSQKNNQLGLKLEEFCQMSGLENMVKQPTREDAFLDLILTPGDGKVHIL---PKLGSSDHCTIYAELDLGLVGIEEPPKQRKVFHWGKARWGELKKEVKKTDFNFE--GLGVQEAVDTVTAKLQELTDKYVP 429
            I +GDFN  +  W TS  NN       +      L  +V +PTR DA LDL+L   +  +  +     LGSSDH  I  +L+     I +   + +VF + +A + +L+K V++ D+  E   L V+EA +    KLQ+L++  +P
Sbjct:  197 IIMGDFNFPDIDWRTSASNNNRAQIFLDVIADEFLHQVVAEPTRGDAILDLVLVSSEDLIDEMVVGDNLGSSDHELIQFKLN---GRINKNKSETRVFDFKRANFNKLRKLVREVDWTKEIMDLKVEEAWNYFKLKLQKLSEACIP 339          
BLAST of mRNA_H-akashiwo_Contig947.1.1 vs. uniprot
Match: A0A8C5MKL7_9ANUR (Reverse transcriptase domain-containing protein n=3 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5MKL7_9ANUR)

HSP 1 Score: 61.6 bits (148), Expect = 6.470e-7
Identity = 82/325 (25.23%), Postives = 146/325 (44.92%), Query Frame = 1
Query:    1 KVIFVGDFNGHNEKWLTSQK---------NNQLGLKLEEFCQMSGLENMVKQPTREDAFLDLILTPGD--GKVHILPKLGSSDHCTIYAELDLGLVGIEEPPKQRKVFHWGKARWGELKKEVKKTDFNFEGL-GVQEAVDTVTAKLQELTDKYVPS-SVPTLSRPLLWWDAKFERAWRRKKRA--HLDGGCPDAIRKETKICDRVCRKAYGRHVLRLKIRLARA--SGSRDFWKLT---KHLSGGM---STRKRTAAPSPQALADYFAAKM-SLPREENKQVPPLEQLPGGAKRLRSFKLTRAMVAKVLRSLNELKSVGPDGVSP 903
            +VI +GDFN  +  W T            N+ LGL          L  +V++PTR++A LDLILT G     V +   LGSSDH +++  +     G+E    + KV  + K  + +++  VK++  ++  L GVQE  D +   L + T   +   S     +  LW+ A+  +  + KK A  +      +  R+  KI  +  ++         + ++A++   G + F++     + +  G+    T++       ++LAD     + S+  EE +   P  QL    K   +++ T   V + L  +   KS+GPDG+ P
Sbjct:    6 EVIIMGDFNLPDVNWKTKTAGCTRSTNILNSLLGL---------SLTQVVEEPTRKEAILDLILTNGGLVSDVVVGENLGSSDHQSVWFNIT---TGMEPHHTRTKVLDFKKTDFSKMRFCVKESLSDWRSLKGVQEKWDYLKEALLKATGNCIRLVSKNKKGKKPLWYSAEVAKIVKNKKTAFNNYKTTQSEEDRQTYKIRQKEAKQYIRASKANAEEKIAQSVKKGDKTFFRYINEKRKVKQGLVRLKTKEGRYVEEDKSLADCLNEYICSVFAEEKEGKGP--QLGENTKETFTYQFTEEEVLQQLSKVKTNKSMGPDGIHP 316          
BLAST of mRNA_H-akashiwo_Contig947.1.1 vs. uniprot
Match: A0A8B9SLS9_ANAPL (Reverse transcriptase domain-containing protein n=2 Tax=Anatinae TaxID=2068716 RepID=A0A8B9SLS9_ANAPL)

HSP 1 Score: 61.2 bits (147), Expect = 8.210e-7
Identity = 82/324 (25.31%), Postives = 136/324 (41.98%), Query Frame = 1
Query:    4 VIFVGDFNGHNEKWLTSQKNNQLGLKLEEFCQMSGLENMVKQPTREDAFLDLILTPGDGKVH---ILPKLGSSDHCTIYAELDLGLVGIEEPPKQRKVFHWGKARWGELKKEVKKTDFN--FEGLGVQEAVDTVTAKLQELTDKYVPSSVPTLS---RPLLWWDAKFERAWRRKKRAHLDGGCPDAIRKETKICDRVCRKAYGRHVLRLKIRLARA--SGSRDFWKL--TKHLS-----------GGMSTRKRTAAPSPQAL-ADYFAAKMSLPREENKQVPPLEQLPGGAKRLRSFKLTRAMVAKVLRSLNELKSVGPDGVSP 903
            ++ VGDFN  +  W  +    +   +  E  + S L  ++ +PTR  A LDL+ T  +G V    +   LG SDH  +   +   L G  +   +  V  + +A +  L+  V    +    +G GVQE       ++    ++ +P   P +S   R   W + +     RRKKR +       A R++ K   R+CR    +    L+++LA A     + F+K   TK  +           G + TR    A    A  A  F+ K     +   Q P L +  G  +   +  +   +V  +LR L+  KS+GPDG+ P
Sbjct:  122 LVLVGDFNFPDISWKHNTAQRKQSRRFLEKVEDSFLTQLISEPTRGGALLDLLFTNREGLVEDVIVGSSLGQSDHEMVEFSI---LGGARKGTSKTTVLDFRRADFRLLRTLVGGVPWEAVLKGRGVQEGWVLFKRQILMAQERSIPMC-PKMSHRGRRPAWLNRELWLELRRKKRVYNLWKIGQATREDYKDVARLCRDKIRKAKAHLELKLATAVKDNKKRFYKYINTKRRTKENLHPLLDAGGNLVTRDEEKAEVLNAFFASVFSGKTGCSLDT--QYPELVE--GDGELDVALTIHEELVGDLLRHLDVHKSMGPDGIHP 437          
BLAST of mRNA_H-akashiwo_Contig947.1.1 vs. uniprot
Match: A0A8C5WI69_9ANUR (Reverse transcriptase domain-containing protein n=19 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5WI69_9ANUR)

HSP 1 Score: 61.2 bits (147), Expect = 8.830e-7
Identity = 83/328 (25.30%), Postives = 146/328 (44.51%), Query Frame = 1
Query:    1 KVIFVGDFNGHNEKWLTSQK---------NNQLGLKLEEFCQMSGLENMVKQPTREDAFLDLILTPGD--GKVHILPKLGSSDHCTIYAELDLGLVGIEEPPKQRKVFHWGKARWGELKKEVKKTDFNFEGL-GVQEAVDTVTAKLQELTDKYVPS-SVPTLSRPLLWWDAKFERAWRRKKRA--HLDGGCPDAIRKETKICDRVCRKAYGRHVLRLKIRLARA--SGSRDFWKLT---KHLSGGM---STRKRTAAPSPQALAD----YFAAKMSLPREENKQVPPLEQLPGGAKRLRSFKLTRAMVAKVLRSLNELKSVGPDGVSP 903
            +VI +GDFN  +  W T            N+ LGL          L  +V++PTR++A LDLILT G     V +   LGSSDH +++  +     G+E    + KV  + K  + +++  VK++  ++  L GVQE  D +   L + T   +   S     +  LW+ A+  +  + KK A  +      +  R+  KI  +  ++         + ++A++   G + F++     + +  G+    T++       + LAD    YF +  +   EE +   P  QL    K   +++ T   V + L  +   KS+GPDG+ P
Sbjct:   73 EVIIMGDFNLPDVNWKTKTAGCTRSTNILNSLLGL---------SLTQVVEEPTRKEAILDLILTNGGLVSDVVVGENLGSSDHQSVWFNIT---TGMEPHHTRTKVLDFKKTDFSKMRFCVKESLSDWRSLKGVQEKWDYLKEALLKATGNCIRLVSKNKKGKKPLWYSAEVAKIVKNKKIAFNNYKTTQSEEDRQTYKIRQKEAKQFIRASKAHAEEKIAQSVKKGDKTFFRYINEKRKVKQGLVRLKTKEGRYVEEDKGLADCLNEYFCSVFA---EEKEGKGP--QLGENTKETFTYQFTEEEVLQQLSKVKTNKSMGPDGIHP 383          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig947.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A7S3Y8S8_HETAK5.040e-19793.02Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3Y8Z6_HETAK1.480e-8949.35Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y8N4_HETAK7.260e-8849.35Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A452I8L2_9SAUR3.960e-1125.70Reverse transcriptase domain-containing protein n=... [more]
K7EZP0_PELSI5.060e-825.41Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A8C5LY40_9ANUR7.970e-825.30Reverse transcriptase domain-containing protein n=... [more]
K7EYV3_PELSI9.250e-832.19Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A8C5MKL7_9ANUR6.470e-725.23Reverse transcriptase domain-containing protein n=... [more]
A0A8B9SLS9_ANAPL8.210e-725.31Reverse transcriptase domain-containing protein n=... [more]
A0A8C5WI69_9ANUR8.830e-725.30Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig947contigH-akashiwo_Contig947:32715..33617 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog7668.SPU_009536-tr
PFAMsADAM_spacer1,EGF,Ephrin_rec_like,GON,HYR,Reprolysin,Reprolysin_5,Sushi,TSP_1,Xlink,hEGF
Model size903
Max annot lvl2759|Eukaryota
KEGG koko:K08625
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.69e-12
EggNOG OGsKOG1075@1|root,KOG3538@1|root,KOG1075@2759|Eukaryota,KOG3538@2759|Eukaryota,3APWC@33154|Opisthokonta,3C20X@33208|Metazoa
DescriptionReverse transcriptase (RNA-dependent DNA polymerase)
Cds size903
COG categoryO
BRITEko00000,ko01000,ko01002
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388054.030912-CDS-H-akashiwo_Contig947:32714..336171681388054.030912-CDS-H-akashiwo_Contig947:32714..33617Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig947 32715..33617 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig947.1.1prot_H-akashiwo_Contig947.1.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig947 32715..33617 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig947.1.1

>prot_H-akashiwo_Contig947.1.1 ID=prot_H-akashiwo_Contig947.1.1|Name=mRNA_H-akashiwo_Contig947.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=301bp
KVIFVGDFNGHNEKWLTSQKNNQLGLKLEEFCQMSGLENMVKQPTREDAF
LDLILTPGDGKVHILPKLGSSDHCTIYAELDLGLVGIEEPPKQRKVFHWG
KARWGELKKEVKKTDFNFEGLGVQEAVDTVTAKLQELTDKYVPSSVPTLS
RPLLWWDAKFERAWRRKKRAHLDGGCPDAIRKETKICDRVCRKAYGRHVL
RLKIRLARASGSRDFWKLTKHLSGGMSTRKRTAAPSPQALADYFAAKMSL
PREENKQVPPLEQLPGGAKRLRSFKLTRAMVAKVLRSLNELKSVGPDGVS
P
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mRNA from alignment at H-akashiwo_Contig947:32715..33617+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig947.1.1 ID=mRNA_H-akashiwo_Contig947.1.1|Name=mRNA_H-akashiwo_Contig947.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=903bp|location=Sequence derived from alignment at H-akashiwo_Contig947:32715..33617+ (Heterosigma akashiwo CCMP452)
AAGGTGATATTTGTTGGCGATTTCAATGGCCACAATGAGAAGTGGTTAAC ATCACAGAAAAACAACCAGCTTGGCCTGAAGCTTGAAGAATTCTGCCAAA TGTCCGGGCTGGAGAACATGGTGAAGCAGCCAACCAGAGAAGATGCTTTT CTCGACCTTATTCTGACTCCTGGTGATGGCAAAGTTCATATTTTGCCAAA GCTTGGGTCATCTGACCATTGCACCATCTATGCTGAGCTGGATCTTGGCC TGGTGGGAATAGAGGAGCCGCCCAAGCAAAGAAAAGTGTTTCACTGGGGG AAAGCCAGATGGGGTGAATTGAAAAAAGAAGTGAAAAAAACTGACTTCAA CTTTGAGGGTCTTGGAGTGCAGGAGGCCGTGGACACAGTGACGGCCAAGC TGCAAGAGTTGACTGATAAGTATGTCCCAAGTTCAGTTCCAACGCTGTCT AGGCCCCTGCTCTGGTGGGATGCCAAGTTTGAGAGGGCGTGGCGCCGGAA GAAGCGTGCTCATCTTGATGGTGGCTGCCCCGATGCTATCAGAAAGGAGA CCAAAATCTGCGACCGGGTCTGCAGAAAGGCATATGGCCGTCATGTGCTC CGCCTGAAGATTCGTCTTGCCAGAGCGTCTGGCTCCAGGGACTTCTGGAA GCTCACAAAGCATCTTTCTGGGGGGATGAGCACGCGCAAGCGGACTGCGG CCCCCTCACCTCAGGCCCTCGCGGACTACTTTGCTGCTAAGATGAGCCTG CCCAGGGAGGAGAACAAGCAAGTGCCACCACTTGAGCAGCTGCCAGGCGG TGCCAAGCGGCTGAGAAGCTTCAAGCTCACACGTGCCATGGTTGCGAAGG TGCTCCGCTCTCTGAATGAGCTAAAGTCAGTTGGTCCTGATGGGGTCAGT CCG
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Coding sequence (CDS) from alignment at H-akashiwo_Contig947:32715..33617+

>mRNA_H-akashiwo_Contig947.1.1 ID=mRNA_H-akashiwo_Contig947.1.1|Name=mRNA_H-akashiwo_Contig947.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=903bp|location=Sequence derived from alignment at H-akashiwo_Contig947:32715..33617+ (Heterosigma akashiwo CCMP452)
AAGGTGATATTTGTTGGCGATTTCAATGGCCACAATGAGAAGTGGTTAAC
ATCACAGAAAAACAACCAGCTTGGCCTGAAGCTTGAAGAATTCTGCCAAA
TGTCCGGGCTGGAGAACATGGTGAAGCAGCCAACCAGAGAAGATGCTTTT
CTCGACCTTATTCTGACTCCTGGTGATGGCAAAGTTCATATTTTGCCAAA
GCTTGGGTCATCTGACCATTGCACCATCTATGCTGAGCTGGATCTTGGCC
TGGTGGGAATAGAGGAGCCGCCCAAGCAAAGAAAAGTGTTTCACTGGGGG
AAAGCCAGATGGGGTGAATTGAAAAAAGAAGTGAAAAAAACTGACTTCAA
CTTTGAGGGTCTTGGAGTGCAGGAGGCCGTGGACACAGTGACGGCCAAGC
TGCAAGAGTTGACTGATAAGTATGTCCCAAGTTCAGTTCCAACGCTGTCT
AGGCCCCTGCTCTGGTGGGATGCCAAGTTTGAGAGGGCGTGGCGCCGGAA
GAAGCGTGCTCATCTTGATGGTGGCTGCCCCGATGCTATCAGAAAGGAGA
CCAAAATCTGCGACCGGGTCTGCAGAAAGGCATATGGCCGTCATGTGCTC
CGCCTGAAGATTCGTCTTGCCAGAGCGTCTGGCTCCAGGGACTTCTGGAA
GCTCACAAAGCATCTTTCTGGGGGGATGAGCACGCGCAAGCGGACTGCGG
CCCCCTCACCTCAGGCCCTCGCGGACTACTTTGCTGCTAAGATGAGCCTG
CCCAGGGAGGAGAACAAGCAAGTGCCACCACTTGAGCAGCTGCCAGGCGG
TGCCAAGCGGCTGAGAAGCTTCAAGCTCACACGTGCCATGGTTGCGAAGG
TGCTCCGCTCTCTGAATGAGCTAAAGTCAGTTGGTCCTGATGGGGTCAGT
CCG
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