mRNA_H-akashiwo_Contig867.1.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig867.1.1
Unique NamemRNA_H-akashiwo_Contig867.1.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig867.1.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK)

HSP 1 Score: 380 bits (976), Expect = 7.540e-128
Identity = 181/348 (52.01%), Postives = 242/348 (69.54%), Query Frame = 1
Query:   61 LHATLLEHGFARSEYEGCIYSRTSGTSTTYVAVYVDDIVIASNDRRTVAALKANLKSKYRITDAGRLENFLGLRVTRNRGRRLIHIDQTQFIKDALVKFGFEHCLPASTPMDNTVDLSVNKGYKAHPDDVSRFKSMVGTLAWVSTWSVPEITFAVHKLQRATNYPEPKHFAAAARVFKYLKGTGHKALRIGGGTILRAYCDADFVNDRLDGKSVTGYIIFLGDSPIVWTSRLQKSVSTSTTEAEYLALGECTKDVMWLRYLLSELGAKQILPTDINEDNQACISWATEITVTRKNRHLHVNYHFAREKVQSNEIKVRYIETKEQIADLFTKALTLDSFERFANYIHKG 1104
            LH  L   GF RS +E C+Y    G +   VAVYVDD+VI+ + +  V+  K +L SKY +TD G L   LG++V R++  +  H+ QT FIKDAL KFG ++     TP+D+TVDL+   G+KA   D + ++SMVGTLAWV+ W+ PE+ F VHKLQR    PEPKHF A  R F+YLKGT  ++LR+GG  +LRA+ D+DF NDR+DGKSVTGYI+FLGD+PIVW+S+LQ +V+TST EAEYLAL    KD+MWLR LL E+G  Q  PT + EDN AC+ WA ++ V ++NRH HV+YH A+E+V    I++ YI+T +Q+AD+ TKAL   +FER    +H G
Sbjct:    3 LHDHLESLGFKRSGHESCLYIHRDGGNELMVAVYVDDLVISGSSQAVVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAANFERHQRVLHHG 350          
BLAST of mRNA_H-akashiwo_Contig867.1.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK)

HSP 1 Score: 314 bits (804), Expect = 5.410e-95
Identity = 153/371 (41.24%), Postives = 245/371 (66.04%), Query Frame = 1
Query:    1 MEAQEKFYGLKQSGRCWYSNLHATLLEHGFARSEYEGCIYSRTSGTS-TTYVAVYVDDIVIASNDRRTVAALKANLKSKYRITDAGRLENFLGLRVTRNRGRRLIHIDQTQFIKDALVKFGFEHCLPASTPMDNTVDLSVNK--GYKAHPDDVSRFKSMVGTLAWVSTWSVPEITFAVHKLQRATNYPEPKHFAAAARVFKYLKGTGHKALRIGGGTILRAYCDADFVNDRLDGKSVTGYIIFLGDSPIVWTSRLQKSVSTSTTEAEYLALGECTKDVMWLRYLLSELGAKQ-ILPTDINEDNQACISWATEITVTRKNRHLHVNYHFAREKVQSNEIKVRYIETKEQIADLFTKALTLDS-FERFANYIH 1098
            ++ ++  YGLKQ+ +CWY NL+  LL+ G+ R+ Y+ C+YS+ S T   T ++VYVDDIV+AS+D+  ++ +K  +   Y ++D G +E+ LG++V R+R  R I + Q  FI++A  KF      P + P++  +D+++N     +    +  +F+S+VGT+ W++ W+ PE+ +++H L +    P     AA+  + +YL  T  K + +GG   L AY DADF ++R  G+S +G+ IFLG SPI+W+SR+Q  V+ +TTEAEY++L     DVMWL+ LL  LG KQ  +P  I EDN+ACI+WA + TV++  RH+HV+YH+ +E VQS EI+V+Y++TK QIAD+FTK L  ++ F++F+  +H
Sbjct:  627 LKLKKSLYGLKQAPKCWYQNLNGFLLQQGYTRNGYDSCVYSKVSSTGGKTLISVYVDDIVLASSDKSELSRIKKAISLGYNVSDMGEIESILGIKVQRDRTARTITLSQHSFIEEACEKFQVRSYEPVTNPVNKGIDVNINTDTSRRLSTFEAKKFRSLVGTVNWLALWTFPEVAYSIHTLSKRFTSPSANCLAASYHLLRYLWWTEDKGVTLGGPLNLTAYADADFCSERHKGRSRSGFAIFLGFSPIIWSSRMQHCVTRNTTEAEYVSLRNAVTDVMWLKRLLESLGYKQGCVP--IYEDNKACITWANDETVSKSARHIHVSYHYTKEMVQSKEIEVKYVDTKHQIADVFTKPLDFNNGFKKFSRVLH 995          
BLAST of mRNA_H-akashiwo_Contig867.1.1 vs. uniprot
Match: A0A067T5Q4_GALM3 (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Galerina marginata (strain CBS 339.88) TaxID=685588 RepID=A0A067T5Q4_GALM3)

HSP 1 Score: 257 bits (656), Expect = 4.070e-73
Identity = 142/375 (37.87%), Postives = 216/375 (57.60%), Query Frame = 1
Query:   10 QEKFYGLKQSGRCWYSNLHATLLEHGFARSEYEGCIYSRTSGTSTTYVAVYVDDIVIASNDRRTVAALKANLKSKYRITDAGRLENFLGLRVTRNRGRRLIHIDQTQFIKDALVKFGFEHCLPASTPMDNTVDLS-VNKG-YKAHPDDV------SRFKSMVGTLAWVSTWSVPEITFAVHKLQRATNYPEPKHFAAAARVFKYLKGTGHKALRIGGGT-----ILRAYCDADFVNDRLDGKSVTGYIIFLGDSPIVWTSRLQKSVSTSTTEAEYLALGECTKDVMWLRYLLSELGAKQILPTDINEDNQACISWATEITVTRKNRHLHVNYHFAREKVQSNEIKVRYIETKEQIADLFTKALTLDSFERFANYI 1095
            ++  YGLKQSGR W   L   L E  F++S  + C+Y RT    T+Y+ V+VDD++I ++    +  +KA LK ++ I+D G  +  +GL V R+R +  I + QT ++   L K+G E+C P STPMD  V L+ VN+   K  P +        R+ + VG+L + +  + P+I +AV KL + ++ P   H+ A  RVF+YL GT  + L  GG       I  AYCDADF +D  D KS++GY +FLG++ I W+S+ Q +++ STTEAEY A+   T+ ++WLR L  +LG  Q  PT +  DNQ+ I+   +     +++H  +  HF R KV    I+V Y  T E  +D+FTKAL     E+F + +
Sbjct:  872 KKTLYGLKQSGREWNRKLDKVLTELRFSKSNVDHCVYIRTENGHTSYITVWVDDLMIFTDKSDEMNEIKAYLKKEFEISDLGEPKLIIGLEVKRDRKKHTISLGQTSYVDRILKKYGMENCRPVSTPMDPNVVLTRVNENDVKDEPREDRDERLGGRYAAAVGSLMYAAIGTRPDIAYAVQKLSKYSSNPGNSHWTALKRVFRYLAGTRDRVLFYGGDVDEDEVIFSAYCDADFASDSDDRKSISGYTLFLGNAAIAWSSKKQTTIALSTTEAEYTAIAHATRQIIWLRNLFQDLGYTQNDPTILFSDNQSAIALTQDPQFHARSKHFDITNHFVRAKVYDQTIEVIYCPTDEMTSDIFTKALAKPKHEQFTSEL 1246          
BLAST of mRNA_H-akashiwo_Contig867.1.1 vs. uniprot
Match: A0A6A3DSS8_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=13 Tax=Phytophthora TaxID=4783 RepID=A0A6A3DSS8_9STRA)

HSP 1 Score: 247 bits (630), Expect = 2.650e-72
Identity = 130/356 (36.52%), Postives = 206/356 (57.87%), Query Frame = 1
Query:   13 EKFYGLKQSGRCWYSNLHATLLEHGFARSEYEGCIYSRTSGTSTTYVAVYVDDIVIASNDRRTVAALKANLKSKYRITDAGRLENFLGLRVTRNRGRRLIHIDQTQFIKDALVKFGFEHCLPASTPMDNTVDLSVNKGYKAHPDDVSR----FKSMVGTLAWVSTWSVPEITFAVHKLQRATNYPEPKHFAAAARVFKYLKGTGHKALRIGG--GTILRAYCDADFVNDRLDGKSVTGYIIFLGDSPIVWTSRLQKSVSTSTTEAEYLALGECTKDVMWLRYLLSELGAKQILPTDINEDNQACISWATEITVTRKNRHLHVNYHFAREKVQSNEIKVRYIETKEQIADLFTKALT 1062
            +  YGLKQ+ R W   +   L   GF  ++ + C+Y+R  G     V +YVDD++IAS  +  +A++KA +  K+RI D GR    LG+ +  +  RR + I Q  + +  + KFG E+  P  TP++  V L+     +   D        ++S+VG+L ++S  + P+I+ AV KL R    P  KH+ A  +V +YL  T    +   G  GT L AY DAD+  +  D +SV+G ++ L  +P+VW S  QK+V+ S+TEAEY+AL +C K+ +W+R L+ ++GA+Q+  T I EDNQ  ++ A  +      +H+ + YHF R+K  SNE+K+ Y++TK Q+AD  TK L+
Sbjct:  285 QSLYGLKQASRVWNETIDKHLKSMGFEPADDDPCVYTRGEGEDECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDMGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGVQLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLSCGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGTQLEAYSDADWAGNWDDRRSVSGMLLMLCGAPVVWRSSFQKTVALSSTEAEYMALSDCVKECVWMRRLIKDIGAEQVGATVIYEDNQGAMALAKNVGYQAGTKHIDIRYHFIRDKAVSNEVKLEYVDTKNQLADFMTKGLS 640          
BLAST of mRNA_H-akashiwo_Contig867.1.1 vs. uniprot
Match: A0A6A3YGI7_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=11 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YGI7_9STRA)

HSP 1 Score: 251 bits (641), Expect = 4.500e-72
Identity = 132/356 (37.08%), Postives = 206/356 (57.87%), Query Frame = 1
Query:   13 EKFYGLKQSGRCWYSNLHATLLEHGFARSEYEGCIYSRTSGTSTTYVAVYVDDIVIASNDRRTVAALKANLKSKYRITDAGRLENFLGLRVTRNRGRRLIHIDQTQFIKDALVKFGFEHCLPASTPMDNTVDLSVNKGYKAHPDDVSR----FKSMVGTLAWVSTWSVPEITFAVHKLQRATNYPEPKHFAAAARVFKYLKGTGHKALRIGG--GTILRAYCDADFVNDRLDGKSVTGYIIFLGDSPIVWTSRLQKSVSTSTTEAEYLALGECTKDVMWLRYLLSELGAKQILPTDINEDNQACISWATEITVTRKNRHLHVNYHFAREKVQSNEIKVRYIETKEQIADLFTKALT 1062
            +  YGLKQ+ R W   +   L   GF  ++ + C+Y+R  G     V +YVDD++IAS     +A++KA +  K+RI D GR    LG+ +  +  RR + I Q  + +  + KFG E+  P  TP++  V L+     +   D        ++S+VG+L +++  + P+I+ AV KL R    P  KH+ A  +V +YL  T    +   G  G  L AY DAD+  +R D +SV+G ++ L  +P+VW S  QK+V+ S+TEAEYLAL +C K+ +W+R LL ++GA+Q+  T I EDNQ  ++ A  +    + +H+ + YHF REK  SNE+K+ Y++TK Q+AD  TK L+
Sbjct:  551 QSLYGLKQASRVWNETIDKNLKSMGFEPADADPCVYTRGEGEDECIVCLYVDDMLIASRQMAVIASVKAGIAEKFRIKDMGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGVQLTKADEPQTEEDKAKMKLKPYRSLVGSLMYLARGTRPDISVAVAKLSRFPENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGAQLEAYSDADWAGNRDDRRSVSGMLLMLCRAPVVWRSTFQKTVALSSTEAEYLALSDCVKECVWMRRLLKDIGAEQVGATVIYEDNQGAMALAKNVGYQARTKHIDIRYHFVREKAVSNEVKLEYVDTKNQLADFMTKGLS 906          
BLAST of mRNA_H-akashiwo_Contig867.1.1 vs. uniprot
Match: A0A6G0QQ26_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=20 Tax=Phytophthora TaxID=4783 RepID=A0A6G0QQ26_9STRA)

HSP 1 Score: 250 bits (638), Expect = 9.230e-72
Identity = 132/356 (37.08%), Postives = 206/356 (57.87%), Query Frame = 1
Query:   13 EKFYGLKQSGRCWYSNLHATLLEHGFARSEYEGCIYSRTSGTSTTYVAVYVDDIVIASNDRRTVAALKANLKSKYRITDAGRLENFLGLRVTRNRGRRLIHIDQTQFIKDALVKFGFEHCLPASTPMDNTVDLSVNKGYKAHPDDVSR----FKSMVGTLAWVSTWSVPEITFAVHKLQRATNYPEPKHFAAAARVFKYLKGTGHKALRIGG--GTILRAYCDADFVNDRLDGKSVTGYIIFLGDSPIVWTSRLQKSVSTSTTEAEYLALGECTKDVMWLRYLLSELGAKQILPTDINEDNQACISWATEITVTRKNRHLHVNYHFAREKVQSNEIKVRYIETKEQIADLFTKALT 1062
            +  YGLKQ+ R W   +   L   GF  ++ + C+Y+R  G     V +YVDD++IAS  +  +A++KA +  K+RI D GR    LG+ +  N  RR + I Q  + +  + K G E+  P  TP++  V L+     +   D        ++S+VG+L ++S  + P+I+ AV KL R    P  KH+ A  +V +YL  T    +   G  GT L AY DAD+  +R D +SV+G ++ L  +P+VW S  QK+V+ S+TEAEY+AL +C K+ +W+R LL ++GA+Q+  T I EDNQ  ++ A  +      +H+ + YHF R+K  SNE+K+ Y++TK Q+AD  TK L+
Sbjct:  529 QSLYGLKQASRVWNETIDKHLKSMGFEPADDDPCVYTRGEGEDECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDMGRARFILGIEIDYNMERRTLGISQKAYTESIIKKVGQENAKPCLTPLEPGVQLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLSCGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGTQLEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSSFQKTVALSSTEAEYMALSDCVKECVWMRRLLKDIGAEQVGATVIYEDNQGAMALAKNVGYQAGTKHIDIRYHFIRDKAVSNEVKLEYVDTKNQLADFMTKGLS 884          
BLAST of mRNA_H-akashiwo_Contig867.1.1 vs. uniprot
Match: A0A507DKM5_9FUNG (DNA-directed DNA polymerase (Fragment) n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DKM5_9FUNG)

HSP 1 Score: 232 bits (592), Expect = 9.960e-70
Identity = 130/357 (36.41%), Postives = 206/357 (57.70%), Query Frame = 1
Query:   22 YGLKQSGRCWYSNLHATLLEHGFARSEYEGCIYSRT--SGTSTTYVAVYVDDIVIASNDRRTVAALKANLKSKYRITDAGRLENFLGLRVTRNRGRRLIHIDQTQFIKDALVKFGFEHCLPASTPMDNT-VDLSVNKGYKAHPD-DVSRFKSMVGTLAWVSTWSVPEITFAVHKLQRATNYPEPKHFAAAARVFKYLKGTGHKALRIGGGTI-LRAYCDADFVNDRLDGKSVTGYIIFLGDS-PIVWTSRLQKSVSTSTTEAEYLALGECTKDVMWLRYLLSELGAKQIL-----PTDINEDNQACISWATEITVTRKNRHLHVNYHFAREKVQSNEIKVRYIETKEQIADLFTKAL 1059
            YGLKQ+ R WYS LH  L   GF R   +  +Y RT     S+ Y++VYVDD++I +  +  ++++K +L +++ +TD G + ++LG+RV R+  R +I++DQ  ++ D L +FG + C P +TPMD T ++    +  K  P+     ++ +VG+L ++   + P+I  AV  L R  + P P+H  AA RV +YL+GT   +L IGG  + L  Y DAD+ N+ +D +S+TGY+ ++G++ P+ W S+ Q +V+ S+TEAEY+AL   T++ +WL  LL EL   + L     PT I EDNQ+CIS A                        + EI + Y+ T E +A+  TK L
Sbjct:    3 YGLKQAPRKWYSLLHKELTSLGFKRLANDNAVYIRTLPKSDSSQYISVYVDDLLIFAKTKSEISSIKTSLHNEFNMTDLGEVNHYLGMRVRRDYSRHVIYLDQESYVNDILERFGMQDCKPVNTPMDRTKLEPYEVENTKTSPNPQEGEYRKIVGSLVYLMICTRPDIAVAVSMLSRFASNPSPQHLQAAKRVLRYLRGTSDYSLCIGGNNVTLHGYSDADWGNNIIDRRSITGYLFYIGNAGPVTWASKRQPTVALSSTEAEYMALSFATQETIWLCSLLQELQIPEYLDENARPTTIYEDNQSCISLA-----------------------MNPEIHLEYLPTAEMVANSLTKPL 336          
BLAST of mRNA_H-akashiwo_Contig867.1.1 vs. uniprot
Match: A0A0A9Z147_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Z147_LYGHE)

HSP 1 Score: 232 bits (592), Expect = 1.320e-69
Identity = 126/362 (34.81%), Postives = 200/362 (55.25%), Query Frame = 1
Query:   10 QEKFYGLKQSGRCWYSNLHATLLEHGFARSEYEGCIYSRTSGTSTTYVAVYVDDIVIASNDRRTVAALKANLKSKYRITDAGRLENFLGLRVTRNRGRRLIHIDQTQFIKDALVKFGFEHCLPASTPMDNTVDLSVNKGYKAHPDDVSRFKSM-----VGTLAWVSTWSVPEITFAVHKLQRATNYPEPKHFAAAARVFKYLKGTGHKALRIGG--GTILRAYCDADFVNDRLDGKSVTGYIIFLGDSPIVWTSRLQKSVSTSTTEAEYLALGECTKDVMWLRYLLSELGAKQILPTDINEDNQACISWATEITVTRKNRHLHVNYHFAREKVQSNEIKVRYIETKEQIADLFTKALTLDSF 1074
            ++  YGLKQ+ R W   L   L   G  +S+++ C+Y +  G S   VAV+VDD++I SNDR+    +K  L   +++TD G  ++ LG ++TR+R  + I I Q  +I++ L +F  +   P +TPM N+   S N+  +   D+  R + +     +G+L + +  S P+I FA+  L R  N P   H+    RVF+YL+GT    L+  G     +  YCDAD+ +D  + +SVTGYI    + PI W ++ Q +V+ STTEAEY+A+    ++ +WLR L  E+     +PT I  DNQ   + A       + +H+ V +HF RE++Q+  +   YI T   +AD  TKAL ++ F
Sbjct:   10 RKSIYGLKQASRIWNQKLDLVLQSFGLTQSKFDSCVYFKIDGKSMLIVAVWVDDLLIFSNDRKLKKQVKLRLTRSFKMTDLGEAKSVLGFQLTRDRQAKRIWISQQHYIEEMLKRFHMDAANPVTTPMSNSEKFSKNQAPQT-ADERERMRKIPYQEAIGSLLFAAQVSRPDIAFAISSLSRFNNNPGMAHWTGVKRVFRYLRGTSSYKLQFDGLKAGPIHGYCDADWASDPDERRSVTGYIFVKCNGPISWCTKRQPTVALSTTEAEYMAMSSAAQEGLWLRGLSEEIEQSSQIPTQIFCDNQGARNLALNGAYQPRTKHIDVRHHFLRERIQAKLLAFTYIPTNRMVADSLTKALDVEKF 370          
BLAST of mRNA_H-akashiwo_Contig867.1.1 vs. uniprot
Match: A0A6A3JMT1_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3JMT1_9STRA)

HSP 1 Score: 233 bits (593), Expect = 1.640e-69
Identity = 127/372 (34.14%), Postives = 212/372 (56.99%), Query Frame = 1
Query:   13 EKFYGLKQSGRCWYSNLHATLLEHGFARSEYEGCIYSRTSGTSTTYVAVYVDDIVIASNDRRTVAALKANLKSKYRITDAGRLENFLGLRVTRNRGRRLIHIDQTQFIKDALVKFGFEHCLPASTPMDNTVDLSVNKGYKAHPDD---VSR---FKSMVGTLAWVSTWSVPEITFAVHKLQRATNYPEPKHFAAAARVFKYLKGTGHKALRIGG--GTILRAYCDADFVNDRLDGKSVTGYIIFLGDSPIVWTSRLQKSVSTSTTEAEYLALGECTKDVMWLRYLLSELGAKQILPTDINEDNQACISWATEITVTRKNRHLHVNYHFAREKVQSNEIKVRYIETKEQIADLFTKALTLDSFERFANYIHKG 1104
            +  YGLKQ+ R W   ++  L E GF  ++ + CIY         ++ +YVDD++IAS D  T+  +K  ++  +++ D G +   LG+ V  +   + + + Q ++I D + +F      P+ TP+D  + L V K  +    +   + R   F+S++G+L++++  + P+I  AV +L R    P  +H+ AA ++ +YLKGT +  +  GG     L AY DAD+ +DR D +SV+G ++ L  +P+VW +  QK+V+ STTEAEY+AL  C K+ MW R LL  LG KQ   T I+EDNQ  I+ A       + +H+ + YH+ RE++ + +I+++YI TKEQ+AD  TK L   +     ++ + G
Sbjct:   21 KSLYGLKQAARVWNQTINTRLAEIGFVSTDADPCIYVSDMQGGRCFICLYVDDLLIASPDMATINTVKDKIRHSFKLKDLGAVRYILGIEVHHDIAEKTLMLRQPRYIDDLVQRFNQTEAHPSVTPID--LSLPVTKEDQPETQEEMTIMRGKPFRSIIGSLSYLAGSTRPDIAVAVSRLSRYLENPGIRHWDAAIKIVRYLKGTRNYGVHFGGKMSPELIAYSDADWGSDRDDRRSVSGTVLMLFGAPVVWKTGYQKTVALSTTEAEYMALTMCVKECMWARLLLKNLGLKQEGATTIHEDNQGAIALARNTGYQSRTKHISIRYHYLRERIIAGDIELKYINTKEQVADFLTKGLPKKTLNYLLDHCNIG 390          
BLAST of mRNA_H-akashiwo_Contig867.1.1 vs. uniprot
Match: A0A182H8F8_AEDAL (Integrase catalytic domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182H8F8_AEDAL)

HSP 1 Score: 239 bits (610), Expect = 1.410e-68
Identity = 130/359 (36.21%), Postives = 212/359 (59.05%), Query Frame = 1
Query:   13 EKFYGLKQSGRCWYSNLHATLLEHGFARSEYEGCIYSRTSGTSTTYVAVYVDDIVIASNDRRTVAALKANLKSKYRITDAGRLENFLGLRVTRNRGRRLIHIDQTQFIKDALVKFGFEHCLPASTPMDNTVDLSVNKGYKAHPDDVSRFKSMVGTLAWVSTWSVPEITFAVHKLQRATNYPEPKHFAAAARVFKYLKGTGHKAL---RIGGGTILRAYCDADFVNDRLDGKSVTGYIIFLGDSPIVWTSRLQKSVSTSTTEAEYLALGECTKDVMWLRYLLSELGAKQILPTDINEDNQACISWATEITVTRKNRHLHVNYHFAREKVQSNEIKVRYIETKEQIADLFTKALTLDSFER 1080
            +  YGLKQ+ R W    H  ++  GF RS+++ C+Y R      +Y+ +YVDDI++AS+    +  +K +L  ++ + D   L +FLGL+V RN     + I+Q+Q+++  L +F  ++C P STP++  V+L + K   A P     ++ +VG L ++   S P+I+ AV+ L R  +     H+    RV +YL+GT    L   R      L  + DAD+ +D  D KS +G +  +  + ++WT+R Q +VS S+TEAEY++L +   D +WLR +L +LG     PT + EDNQ+CI  A+E    ++ +HL + YHF RE +Q+ EI+V Y+ T+EQ+AD+FTK+L   SF++
Sbjct:  397 KSLYGLKQAPRSWNERFHKFMVHLGFERSQHDSCLYVRQKNGVVSYLILYVDDIILASSSLDELVRIKRSLTQEFEMDDMKELNHFLGLKVERNMKEGTLTINQSQYVRALLKRFDMQNCKPVSTPLE--VNLKLEKNESA-PVTQHPYRELVGCLTYLMLSSRPDISSAVNFLSRFQSRATDTHWTHLKRVLRYLQGTKDYNLVYKRSENPKPLVGFADADWGSDVNDRKSTSGSLFQVFGNSVLWTTRKQATVSLSSTEAEYVSLSQAACDAIWLRNVLKDLGVDCCSPTTLYEDNQSCIHIASEPCDQKRLKHLDIRYHFIRECIQAGEIRVEYLPTQEQVADMFTKSLPSSSFQK 752          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig867.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4DD78_HETAK7.540e-12852.01Hypothetical protein n=4 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y1P1_HETAK5.410e-9541.24Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A067T5Q4_GALM34.070e-7337.87Integrase catalytic domain-containing protein (Fra... [more]
A0A6A3DSS8_9STRA2.650e-7236.52Retrovirus-related Pol polyprotein from transposon... [more]
A0A6A3YGI7_9STRA4.500e-7237.08Retrovirus-related Pol polyprotein from transposon... [more]
A0A6G0QQ26_9STRA9.230e-7237.08Retrovirus-related Pol polyprotein from transposon... [more]
A0A507DKM5_9FUNG9.960e-7036.41DNA-directed DNA polymerase (Fragment) n=1 Tax=Pow... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig867contigH-akashiwo_Contig867:74974..76107 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog67593.Physo140614
PFAMsRVT_2,Retrotran_gag_2,rve
Model size1134
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.76e-65
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,3QHHC@4776|Peronosporales
Descriptiongag-polypeptide of LTR copia-type
Cds size1134
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388017.6568813-CDS-H-akashiwo_Contig867:74973..761071681388017.6568813-CDS-H-akashiwo_Contig867:74973..76107Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig867 74974..76107 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig867.1.1prot_H-akashiwo_Contig867.1.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig867 74974..76107 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig867.1.1

>prot_H-akashiwo_Contig867.1.1 ID=prot_H-akashiwo_Contig867.1.1|Name=mRNA_H-akashiwo_Contig867.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=378bp
MEAQEKFYGLKQSGRCWYSNLHATLLEHGFARSEYEGCIYSRTSGTSTTY
VAVYVDDIVIASNDRRTVAALKANLKSKYRITDAGRLENFLGLRVTRNRG
RRLIHIDQTQFIKDALVKFGFEHCLPASTPMDNTVDLSVNKGYKAHPDDV
SRFKSMVGTLAWVSTWSVPEITFAVHKLQRATNYPEPKHFAAAARVFKYL
KGTGHKALRIGGGTILRAYCDADFVNDRLDGKSVTGYIIFLGDSPIVWTS
RLQKSVSTSTTEAEYLALGECTKDVMWLRYLLSELGAKQILPTDINEDNQ
ACISWATEITVTRKNRHLHVNYHFAREKVQSNEIKVRYIETKEQIADLFT
KALTLDSFERFANYIHKGKWWGGQEAL*
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mRNA from alignment at H-akashiwo_Contig867:74974..76107-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig867.1.1 ID=mRNA_H-akashiwo_Contig867.1.1|Name=mRNA_H-akashiwo_Contig867.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1134bp|location=Sequence derived from alignment at H-akashiwo_Contig867:74974..76107- (Heterosigma akashiwo CCMP452)
ATGGAAGCTCAAGAAAAGTTCTATGGGCTTAAACAATCCGGGAGATGCTG GTATTCAAATCTGCATGCTACATTGCTGGAGCACGGTTTTGCGAGGAGCG AGTACGAAGGGTGCATATATTCTAGGACCTCGGGCACTTCGACTACCTAT GTGGCTGTTTATGTTGACGACATCGTTATTGCATCCAACGATCGCAGAAC CGTGGCCGCGTTGAAGGCGAATTTGAAAAGCAAATACAGGATCACTGATG CGGGTCGGTTGGAGAATTTCTTGGGCCTCAGGGTTACCAGAAATAGAGGA CGCAGATTGATTCACATTGATCAAACTCAGTTCATAAAGGATGCTTTGGT TAAGTTTGGTTTCGAACATTGCTTGCCTGCGTCCACACCCATGGATAACA CGGTAGACTTGTCTGTGAATAAAGGGTACAAAGCTCACCCCGATGATGTT TCCAGATTCAAATCCATGGTAGGGACATTAGCTTGGGTGTCTACGTGGTC CGTGCCAGAAATCACATTTGCAGTCCATAAACTTCAACGGGCAACCAACT ACCCAGAGCCTAAACATTTTGCGGCTGCTGCCCGTGTGTTCAAGTATCTA AAGGGTACTGGACACAAAGCTTTGAGGATTGGGGGTGGAACAATCCTACG AGCATACTGCGATGCCGATTTCGTAAATGATCGATTGGATGGTAAATCAG TAACTGGGTATATCATATTCCTAGGTGATTCACCGATAGTGTGGACCTCT CGGCTCCAAAAGAGCGTCTCCACTTCAACTACTGAAGCTGAGTACCTAGC TTTGGGAGAGTGTACAAAGGACGTAATGTGGCTCAGGTATCTTCTGAGTG AGTTAGGGGCCAAACAGATTCTACCAACAGACATTAATGAAGACAATCAG GCTTGTATCTCCTGGGCTACCGAGATCACTGTGACCAGGAAGAATAGACA TCTACATGTCAATTATCATTTTGCCAGAGAAAAGGTACAGTCAAATGAAA TCAAAGTGAGATATATTGAAACAAAGGAGCAAATTGCAGACCTCTTCACT AAAGCACTGACTCTGGACTCTTTTGAAAGATTTGCCAATTACATACACAA AGGGAAATGGTGGGGTGGCCAAGAAGCCCTATGA
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Coding sequence (CDS) from alignment at H-akashiwo_Contig867:74974..76107-

>mRNA_H-akashiwo_Contig867.1.1 ID=mRNA_H-akashiwo_Contig867.1.1|Name=mRNA_H-akashiwo_Contig867.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1134bp|location=Sequence derived from alignment at H-akashiwo_Contig867:74974..76107- (Heterosigma akashiwo CCMP452)
ATGGAAGCTCAAGAAAAGTTCTATGGGCTTAAACAATCCGGGAGATGCTG
GTATTCAAATCTGCATGCTACATTGCTGGAGCACGGTTTTGCGAGGAGCG
AGTACGAAGGGTGCATATATTCTAGGACCTCGGGCACTTCGACTACCTAT
GTGGCTGTTTATGTTGACGACATCGTTATTGCATCCAACGATCGCAGAAC
CGTGGCCGCGTTGAAGGCGAATTTGAAAAGCAAATACAGGATCACTGATG
CGGGTCGGTTGGAGAATTTCTTGGGCCTCAGGGTTACCAGAAATAGAGGA
CGCAGATTGATTCACATTGATCAAACTCAGTTCATAAAGGATGCTTTGGT
TAAGTTTGGTTTCGAACATTGCTTGCCTGCGTCCACACCCATGGATAACA
CGGTAGACTTGTCTGTGAATAAAGGGTACAAAGCTCACCCCGATGATGTT
TCCAGATTCAAATCCATGGTAGGGACATTAGCTTGGGTGTCTACGTGGTC
CGTGCCAGAAATCACATTTGCAGTCCATAAACTTCAACGGGCAACCAACT
ACCCAGAGCCTAAACATTTTGCGGCTGCTGCCCGTGTGTTCAAGTATCTA
AAGGGTACTGGACACAAAGCTTTGAGGATTGGGGGTGGAACAATCCTACG
AGCATACTGCGATGCCGATTTCGTAAATGATCGATTGGATGGTAAATCAG
TAACTGGGTATATCATATTCCTAGGTGATTCACCGATAGTGTGGACCTCT
CGGCTCCAAAAGAGCGTCTCCACTTCAACTACTGAAGCTGAGTACCTAGC
TTTGGGAGAGTGTACAAAGGACGTAATGTGGCTCAGGTATCTTCTGAGTG
AGTTAGGGGCCAAACAGATTCTACCAACAGACATTAATGAAGACAATCAG
GCTTGTATCTCCTGGGCTACCGAGATCACTGTGACCAGGAAGAATAGACA
TCTACATGTCAATTATCATTTTGCCAGAGAAAAGGTACAGTCAAATGAAA
TCAAAGTGAGATATATTGAAACAAAGGAGCAAATTGCAGACCTCTTCACT
AAAGCACTGACTCTGGACTCTTTTGAAAGATTTGCCAATTACATACACAA
AGGGAAATGGTGGGGTGGCCAAGAAGCCCTATGA
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