mRNA_H-akashiwo_Contig837.6.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig837.6.1
Unique NamemRNA_H-akashiwo_Contig837.6.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig837.6.1 vs. uniprot
Match: J9KBW9_ACYPI (Uncharacterized protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9KBW9_ACYPI)

HSP 1 Score: 65.5 bits (158), Expect = 1.260e-10
Identity = 35/73 (47.95%), Postives = 50/73 (68.49%), Query Frame = 1
Query:    7 LYPNIKKVLLVLGILPSHTSEAERVISLLRRLKPWLRSTMGQDKLNACALAMAYRDEQKVDIEEILFRWNAQK 225
            +YPNIK++LL++  LP   + AER  S LRRLK WLRS MGQ++L+  AL   +R E +VD ++I+ R+   K
Sbjct:  553 IYPNIKRLLLIIACLPISVASAERSFSTLRRLKTWLRSKMGQNRLSGLALLNIHR-EIEVDTQDIIQRFAKMK 624          
BLAST of mRNA_H-akashiwo_Contig837.6.1 vs. uniprot
Match: A0A6G0VS68_APHCR (52 kDa repressor of the inhibitor of the protein kinase-like (Fragment) n=1 Tax=Aphis craccivora TaxID=307492 RepID=A0A6G0VS68_APHCR)

HSP 1 Score: 65.5 bits (158), Expect = 1.260e-10
Identity = 34/74 (45.95%), Postives = 50/74 (67.57%), Query Frame = 1
Query:    4 ELYPNIKKVLLVLGILPSHTSEAERVISLLRRLKPWLRSTMGQDKLNACALAMAYRDEQKVDIEEILFRWNAQK 225
             ++PNI K+L+++  LP   + AER  S LRRLK WLRST+G+++LN  AL   ++D   +DIE I+ R+  QK
Sbjct:  599 SIFPNINKMLIIICSLPISVATAERSFSTLRRLKTWLRSTIGEERLNGLALLHIHKDIP-IDIENIITRFAKQK 671          
BLAST of mRNA_H-akashiwo_Contig837.6.1 vs. uniprot
Match: J9KCW5_ACYPI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9KCW5_ACYPI)

HSP 1 Score: 64.7 bits (156), Expect = 1.890e-10
Identity = 35/74 (47.30%), Postives = 48/74 (64.86%), Query Frame = 1
Query:    4 ELYPNIKKVLLVLGILPSHTSEAERVISLLRRLKPWLRSTMGQDKLNACALAMAYRDEQKVDIEEILFRWNAQK 225
             ++PNI  +L ++  LP   + AER  S LRRLK WLRST G+D+LN  AL   +RD  K+DI+ I+ R+  QK
Sbjct:  245 SVFPNIHYILSIICSLPISVASAERSFSTLRRLKTWLRSTTGEDRLNGLALLHIHRDI-KIDIDNIITRFAKQK 317          
BLAST of mRNA_H-akashiwo_Contig837.6.1 vs. uniprot
Match: UPI000B930CBD (52 kDa repressor of the inhibitor of the protein kinase-like n=1 Tax=Myzus persicae TaxID=13164 RepID=UPI000B930CBD)

HSP 1 Score: 64.7 bits (156), Expect = 2.350e-10
Identity = 35/73 (47.95%), Postives = 49/73 (67.12%), Query Frame = 1
Query:    7 LYPNIKKVLLVLGILPSHTSEAERVISLLRRLKPWLRSTMGQDKLNACALAMAYRDEQKVDIEEILFRWNAQK 225
            +YPNIK++LL++  LP   + AER  S LRRLK WLRS MGQ++L   AL   +R E ++D +EI+ R+   K
Sbjct:  557 IYPNIKRLLLIIACLPISVASAERSFSTLRRLKTWLRSKMGQNRLCGLALLNIHR-EIEIDTQEIIQRFAKMK 628          
BLAST of mRNA_H-akashiwo_Contig837.6.1 vs. uniprot
Match: UPI0011146580 (zinc finger MYM-type protein 1-like n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=UPI0011146580)

HSP 1 Score: 63.2 bits (152), Expect = 3.050e-10
Identity = 34/73 (46.58%), Postives = 48/73 (65.75%), Query Frame = 1
Query:    7 LYPNIKKVLLVLGILPSHTSEAERVISLLRRLKPWLRSTMGQDKLNACALAMAYRDEQKVDIEEILFRWNAQK 225
            ++PNIKK+L ++  LP   + AER  S LRRLK WLRS MGQD+L   AL   Y+ E  + ++EI+ R++  K
Sbjct:  139 IFPNIKKLLGIMACLPISVASAERSFSTLRRLKTWLRSKMGQDRLCGLALLHIYQ-EINIPVDEIIERFSRMK 210          
BLAST of mRNA_H-akashiwo_Contig837.6.1 vs. uniprot
Match: A0A8B8G8X5_9HEMI (zinc finger MYM-type protein 1-like n=1 Tax=Sipha flava TaxID=143950 RepID=A0A8B8G8X5_9HEMI)

HSP 1 Score: 60.5 bits (145), Expect = 3.300e-10
Identity = 30/66 (45.45%), Postives = 45/66 (68.18%), Query Frame = 1
Query:    7 LYPNIKKVLLVLGILPSHTSEAERVISLLRRLKPWLRSTMGQDKLNACALAMAYRDEQKVDIEEIL 204
            LYPNIKK+L ++  LP   + AER  S +RRLK WLRS MG+++L   AL   +R  + V+++E++
Sbjct:   15 LYPNIKKILHIIACLPVSVASAERSFSTIRRLKTWLRSNMGEERLVGLALLNIHR-HRTVEVDEVI 79          
BLAST of mRNA_H-akashiwo_Contig837.6.1 vs. uniprot
Match: X1WQF9_ACYPI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Acyrthosiphon pisum TaxID=7029 RepID=X1WQF9_ACYPI)

HSP 1 Score: 61.2 bits (147), Expect = 5.430e-10
Identity = 31/66 (46.97%), Postives = 45/66 (68.18%), Query Frame = 1
Query:    7 LYPNIKKVLLVLGILPSHTSEAERVISLLRRLKPWLRSTMGQDKLNACALAMAYRDEQKVDIEEIL 204
            LYPNIKK+L ++  LP   + AER  S LRRLK WLRS MG+++L   AL   +R  + V+++E++
Sbjct:   78 LYPNIKKILHIIACLPVSVASAERSFSTLRRLKTWLRSNMGEERLVGLALLNIHR-HRTVEVDEVI 142          
BLAST of mRNA_H-akashiwo_Contig837.6.1 vs. uniprot
Match: UPI000DC14573 (zinc finger MYM-type protein 1-like n=2 Tax=Aphidini TaxID=33387 RepID=UPI000DC14573)

HSP 1 Score: 63.5 bits (153), Expect = 5.920e-10
Identity = 33/73 (45.21%), Postives = 49/73 (67.12%), Query Frame = 1
Query:    7 LYPNIKKVLLVLGILPSHTSEAERVISLLRRLKPWLRSTMGQDKLNACALAMAYRDEQKVDIEEILFRWNAQK 225
            LYP +KK+L +L  LP   + AER  S LRRLK WLRSTMGQ++L+  AL   +R    ++I++I+ +++  K
Sbjct:  420 LYPTVKKLLFILACLPVSVASAERSFSTLRRLKTWLRSTMGQNRLSGLALLHVHRSIS-INIDKIIDKFSQMK 491          
BLAST of mRNA_H-akashiwo_Contig837.6.1 vs. uniprot
Match: UPI000B935035 (zinc finger MYM-type protein 1-like n=1 Tax=Myzus persicae TaxID=13164 RepID=UPI000B935035)

HSP 1 Score: 63.5 bits (153), Expect = 6.020e-10
Identity = 34/73 (46.58%), Postives = 46/73 (63.01%), Query Frame = 1
Query:    7 LYPNIKKVLLVLGILPSHTSEAERVISLLRRLKPWLRSTMGQDKLNACALAMAYRDEQKVDIEEILFRWNAQK 225
            ++P I  +LL+LG LP   + AER  S LRRLK WLRS MGQD+L   AL   +R E  + +E I+ R+ + K
Sbjct:  605 IFPTIHNILLILGTLPVSVATAERSFSTLRRLKTWLRSQMGQDRLVGLALLNVHR-EYNISVENIISRFASMK 676          
BLAST of mRNA_H-akashiwo_Contig837.6.1 vs. uniprot
Match: UPI00201426D7 (52 kDa repressor of the inhibitor of the protein kinase-like n=2 Tax=Megalobrama amblycephala TaxID=75352 RepID=UPI00201426D7)

HSP 1 Score: 63.2 bits (152), Expect = 8.210e-10
Identity = 33/73 (45.21%), Postives = 48/73 (65.75%), Query Frame = 1
Query:    1 MELYPNIKKVLLVLGILPSHTSEAERVISLLRRLKPWLRSTMGQDKLNACALAMAYRDEQKVDIEEILFRWNA 219
            +E YPN+K +LL+   LP  T   ER  S LRRLK WLRSTMG ++L++ AL   +++ + +D   +L RW+A
Sbjct:  561 LEFYPNVKCMLLLFLTLPVTTCSCERSFSALRRLKTWLRSTMGDERLSSLALMHVHQNIE-IDPHRVLQRWDA 632          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig837.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
J9KBW9_ACYPI1.260e-1047.95Uncharacterized protein n=1 Tax=Acyrthosiphon pisu... [more]
A0A6G0VS68_APHCR1.260e-1045.9552 kDa repressor of the inhibitor of the protein k... [more]
J9KCW5_ACYPI1.890e-1047.30Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ac... [more]
UPI000B930CBD2.350e-1047.9552 kDa repressor of the inhibitor of the protein k... [more]
UPI00111465803.050e-1046.58zinc finger MYM-type protein 1-like n=1 Tax=Acyrth... [more]
A0A8B8G8X5_9HEMI3.300e-1045.45zinc finger MYM-type protein 1-like n=1 Tax=Sipha ... [more]
X1WQF9_ACYPI5.430e-1046.97Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ac... [more]
UPI000DC145735.920e-1045.21zinc finger MYM-type protein 1-like n=2 Tax=Aphidi... [more]
UPI000B9350356.020e-1046.58zinc finger MYM-type protein 1-like n=1 Tax=Myzus ... [more]
UPI00201426D78.210e-1045.2152 kDa repressor of the inhibitor of the protein k... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig837contigH-akashiwo_Contig837:220693..220929 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog7029.ACYPI20279-PA
Preferred namePrkrir
PFAMsDUF4371,Dimer_Tnp_hAT,THAP
Model size238
Max annot lvl33208|Metazoa
Hectar predicted targeting categorysignal peptide
Exons1
Evalue2.07e-11
EggNOG OGs2CN6C@1|root,2QU3U@2759|Eukaryota,38GGN@33154|Opisthokonta,3BC7U@33208|Metazoa,3DKI7@33213|Bilateria,422A5@6656|Arthropoda,3SQP0@50557|Insecta
Description52 kDa repressor of the inhibitor of the protein
Cds size237
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388005.2760525-CDS-H-akashiwo_Contig837:220692..2209291681388005.2760525-CDS-H-akashiwo_Contig837:220692..220929Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig837 220693..220929 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig837.6.1prot_H-akashiwo_Contig837.6.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig837 220693..220929 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig837.6.1

>prot_H-akashiwo_Contig837.6.1 ID=prot_H-akashiwo_Contig837.6.1|Name=mRNA_H-akashiwo_Contig837.6.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=79bp
MELYPNIKKVLLVLGILPSHTSEAERVISLLRRLKPWLRSTMGQDKLNAC
ALAMAYRDEQKVDIEEILFRWNAQKIETL
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mRNA from alignment at H-akashiwo_Contig837:220693..220929+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig837.6.1 ID=mRNA_H-akashiwo_Contig837.6.1|Name=mRNA_H-akashiwo_Contig837.6.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=237bp|location=Sequence derived from alignment at H-akashiwo_Contig837:220693..220929+ (Heterosigma akashiwo CCMP452)
ATGGAGTTGTACCCAAATATTAAAAAGGTACTGCTTGTGCTAGGTATCCT GCCATCGCATACATCCGAAGCTGAAAGAGTGATCAGTCTACTCAGAAGGT TGAAGCCTTGGCTCAGGAGCACAATGGGCCAGGACAAGCTGAATGCATGT GCGCTGGCAATGGCTTATCGCGACGAGCAAAAGGTAGACATAGAAGAGAT TCTCTTCCGCTGGAATGCACAAAAAATAGAAACATTG
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Coding sequence (CDS) from alignment at H-akashiwo_Contig837:220693..220929+

>mRNA_H-akashiwo_Contig837.6.1 ID=mRNA_H-akashiwo_Contig837.6.1|Name=mRNA_H-akashiwo_Contig837.6.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=237bp|location=Sequence derived from alignment at H-akashiwo_Contig837:220693..220929+ (Heterosigma akashiwo CCMP452)
ATGGAGTTGTACCCAAATATTAAAAAGGTACTGCTTGTGCTAGGTATCCT
GCCATCGCATACATCCGAAGCTGAAAGAGTGATCAGTCTACTCAGAAGGT
TGAAGCCTTGGCTCAGGAGCACAATGGGCCAGGACAAGCTGAATGCATGT
GCGCTGGCAATGGCTTATCGCGACGAGCAAAAGGTAGACATAGAAGAGAT
TCTCTTCCGCTGGAATGCACAAAAAATAGAAACATTG
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