mRNA_H-akashiwo_Contig836.8.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig836.8.1 vs. uniprot
Match: A0A379Z3W0_SERMA (Beta-galactosidase n=1 Tax=Serratia marcescens TaxID=615 RepID=A0A379Z3W0_SERMA) HSP 1 Score: 191 bits (484), Expect = 3.620e-55 Identity = 103/227 (45.37%), Postives = 132/227 (58.15%), Query Frame = 1 Query: 1 RKKWEDPTVFGIGRVSAHTDLAAFPSLEEAAATNFNRAASSSLISLDGDWRFLYSPKGEKGLPLDFETAGLDDTMWDTIEVPSNWQMKGYGIPIYTNTVYPIPVDPPRVPKQNPMGIYRRAVDIPTGWLAGDAEIRLIFQGADSTLEVWVNGHWVGYSQDSRLP-ES*RGALPAAGSTRNGARVAQWSDATYLEDQDHWWLSGLHRSVELQRLPAAHLRDYRVATEL 678 R+ W++P R+ AH A++ ++E+A + A S+S SL+G+WRF Y P+ E P + L D + VPSNWQ+ GY PIYTN YP PVDPPRVP+ NP G Y R ++ WLA + R+IF G +S +W NGHWVGYSQDSRLP E G G R V +W D +YLEDQD W +SG+ R V L PAAHL D R+ T L Sbjct: 15 RRDWQNPACTHYRRLDAHPPFASWRTVEDAR----DDAPSASRRSLNGEWRFSYFPRPEAA-PESWLQQDLPDAA--PLAVPSNWQLAGYDAPIYTNVRYPFPVDPPRVPEDNPTGCYSRTFNVDPAWLAA-GQTRVIFDGVNSAFYLWCNGHWVGYSQDSRLPAEFDLGPWLQPGENRLAVMVLRWCDGSYLEDQDMWRMSGIFRDVSLLHKPAAHLSDVRITTPL 233
BLAST of mRNA_H-akashiwo_Contig836.8.1 vs. uniprot
Match: A0A7V3I5K8_9BACT (Beta-galactosidase subunit alpha (Fragment) n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7V3I5K8_9BACT) HSP 1 Score: 185 bits (470), Expect = 1.070e-54 Identity = 104/222 (46.85%), Postives = 126/222 (56.76%), Query Frame = 1 Query: 10 WEDPTVFGIGRVSAHTDLAAFPSLEEAAATNFNRAASSSLISLDGDWRFLYSPKGEKGLPLDFETAGLDDTMWDTIEVPSNWQMKGYGIPIYTNTVYPIPVDPPRVPKQNPMGIYRRAVDIPTGWLAGDAEIRLIFQGADSTLEVWVNGHWVGYSQDSRLP-ES*RGALPAAGSTRNGARVAQWSDATYLEDQDHWWLSGLHRSVELQRLPAAHLRDYRVAT 672 WE+P + R+ A + ++P + AAA F+ A S + SL+G W+F YSP + P F G D WD IEVPS WQMKGYG P YTN +YP PVDPPR P NP G Y R +IP W D ++ L F G DS VWVNG G+S+ SR P E L G RV QWSD +Y EDQD WWLSG+ R V L +P A +RD RV T Sbjct: 4 WENPELLHRNRLPARAYVFSYP--DTAAALTFDPAGSPWVQSLNGKWKFDYSPAPAEA-PERFYETGFDADDWDEIEVPSCWQMKGYGRPHYTNVLYPFPVDPPRAPTDNPTGSYLRKFNIPAIWK--DMQVILRFDGVDSAFHVWVNGKPAGFSKGSRTPAEFDITDLVEPGPNTIAVRVYQWSDGSYCEDQDMWWLSGIFRDVTLIAMPRAGIRDVRVQT 220
BLAST of mRNA_H-akashiwo_Contig836.8.1 vs. uniprot
Match: UPI001A119298 (Uncharacterized protein n=1 Tax=Escherichia coli TaxID=562 RepID=UPI001A119298) HSP 1 Score: 183 bits (465), Expect = 3.400e-54 Identity = 100/225 (44.44%), Postives = 128/225 (56.89%), Query Frame = 1 Query: 1 RKKWEDPTVFGIGRVSAHTDLAAFPSLEEAAATNFNRAASSSLISLDGDWRFLYSPKGEKGLPLDFETAGLDDTMWDTIEVPSNWQMKGYGIPIYTNTVYPIPVDPPRVPKQNPMGIYRRAVDIPTGWLAGDAEIRLIFQGADSTLEVWVNGHWVGYSQDSRLP-ES*RGALPAAGSTRNGARVAQWSDATYLEDQDHWWLSGLHRSVELQRLPAAHLRDYRVAT 672 R+ WE+P V + R++AH A++ + EEA S L SL+G+WRF + P E +P + L D DTI VPSNWQM GY PIYTN YPI V+PP VP +NP G Y ++ WL + + R+IF G +S +W NG WVGY QDSRLP E A AG R V +WSD +YLEDQD W +SG+ R V L P + D+ VAT Sbjct: 14 RRDWENPGVTQLNRLAAHPPFASWRNSEEARTDR----PSQQLRSLNGEWRFAWFPAPE-AVPESWLECDLPDA--DTIVVPSNWQMHGYDAPIYTNVTYPITVNPPFVPVENPTGCYSLTFNVDESWLQ-EGQTRIIFDGVNSAFHLWCNGRWVGYGQDSRLPSEFDLSAFLRAGENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHKPTTQISDFHVAT 230
BLAST of mRNA_H-akashiwo_Contig836.8.1 vs. uniprot
Match: A0A7C3M5T3_9FIRM (Beta-galactosidase subunit alpha (Fragment) n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C3M5T3_9FIRM) HSP 1 Score: 183 bits (464), Expect = 5.890e-54 Identity = 100/224 (44.64%), Postives = 125/224 (55.80%), Query Frame = 1 Query: 10 WEDPTVFGIGRVSAHTDLAAFPSLEEAAATNFNRAASSSLISLDGDWRFLYSPKGEKGLPLDFETAGLDDTMWDTIEVPSNWQMKGYGIPIYTNTVYPIPVDPPRVPKQNPMGIYRRAVDIPTGWLAGDAEIRLIFQGADSTLEVWVNGHWVGYSQDSRLP-ES*RGALPAAGSTRNGARVAQWSDATYLEDQDHWWLSGLHRSVELQRLPAAHLRDYRVATEL 678 WE+ V R+ + +P ++ A F R S + L+G W+F Y P ++ P DF D + WD I VPSNWQM+GYG P YTN +YP PVDPPRVP +NP G YRR I D + L F+G DS VWVNG VGYSQ SRLP E + G RV QWSD +YLEDQD WWLSG+ R V L P ++RD+ + T+L Sbjct: 8 WENLKVLQRNRLKSRAYFIPYPDVDSA--LTFQREISDRIKLLNGRWKFHYDPSPQEA-PRDFYREDYDVSSWDEIRVPSNWQMEGYGHPHYTNVMYPFPVDPPRVPSENPTGSYRREFHIDED--LKDKRVILRFEGVDSAFHVWVNGKEVGYSQGSRLPSEFDITSYVRPGKNILAVRVYQWSDGSYLEDQDMWWLSGIFRDVYLIIRPRVYIRDFFITTDL 226
BLAST of mRNA_H-akashiwo_Contig836.8.1 vs. uniprot
Match: A0A455SCQ0_9CHLR (Beta-galactosidase n=2 Tax=Thermosporothrix TaxID=768650 RepID=A0A455SCQ0_9CHLR) HSP 1 Score: 195 bits (495), Expect = 1.050e-53 Identity = 109/227 (48.02%), Postives = 130/227 (57.27%), Query Frame = 1 Query: 4 KKWEDPTVFGIGRVSAHTDLAAF-PSLEEAAATNFNRAASSSLISLDGDWRFLYSPKGEKGLPLDFETAGLDDTMWDTIEVPSNWQMKGYGIPIYTNTVYPIPVDPPRVPKQNPMGIYRRAVDIPTGWLAGDAEIRLIFQGADSTLEVWVNGHWVGYSQDSRLP-ES*RGALPAAGSTRNGARVAQWSDATYLEDQDHWWLSGLHRSVELQRLPAAHLRDYRVATEL 678 + WE+ + R+ D A F P +E A ++R ASSS+ L+G W+F Y+ E P F A D WD I VP WQ++GYG P YTN VYP PVDPP VP +NP G YRR IP W +IRL F+G DS VWVNG VGYSQ SRLP E L A G RV QWSD +Y+EDQD WWLSG+ R V L +P H+ DY V TEL Sbjct: 10 RDWENLEILQRNRLP---DRAYFIPYQDERTALTYDRGASSSIRLLNGMWKFHYADAPEHA-PAGFFAANFDVAAWDEIAVPGCWQLQGYGRPHYTNVVYPFPVDPPHVPTENPTGSYRRTFTIPASWQG--QQIRLRFEGVDSAFHVWVNGKEVGYSQGSRLPSEFDITNLVAPGENSVSVRVYQWSDGSYIEDQDMWWLSGIFRDVYLIAMPPLHIEDYTVRTEL 230
BLAST of mRNA_H-akashiwo_Contig836.8.1 vs. uniprot
Match: A0A4V6JL04_9ENTR (Beta-galactosidase n=2 Tax=Enterobacteriaceae TaxID=543 RepID=A0A4V6JL04_9ENTR) HSP 1 Score: 181 bits (459), Expect = 2.800e-53 Identity = 100/225 (44.44%), Postives = 131/225 (58.22%), Query Frame = 1 Query: 1 RKKWEDPTVFGIGRVSAHTDLAAFPSLEEAAATNFNRAASSSLISLDGDWRFLYSPKGEKGLPLDFETAGLDDTMWDTIEVPSNWQMKGYGIPIYTNTVYPIPVDPPRVPKQNPMGIYRRAVDIPTGWLAGDAEIRLIFQGADSTLEVWVNGHWVGYSQDSRLP-ES*RGALPAAGSTRNGARVAQWSDATYLEDQDHWWLSGLHRSVELQRLPAAHLRDYRVAT 672 R+ WE+P V + R++AH A++ + EEA +R + S SL+G+WRF + P E +P + L D DT+ VPSNWQM GY PIYTN YPI V+PP VP +NP G Y +I WL + + R+IF G +S +W NG WVGY QDSRLP E A AG R V +WSD +YLEDQD W +SG+ R V L P+ + D+ VAT Sbjct: 14 RRDWENPGVTQLNRLAAHPPFASWRNSEEA---RTDRPSQESR-SLNGEWRFAWFPAPE-AVPESWLERDLPDA--DTVIVPSNWQMHGYDAPIYTNVTYPIAVNPPYVPTENPTGCYSLTFNIDESWLQ-EGQTRIIFDGVNSAFHLWCNGRWVGYGQDSRLPSEFDLSAFLHAGENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHKPSTQISDFHVAT 230
BLAST of mRNA_H-akashiwo_Contig836.8.1 vs. uniprot
Match: A0A365T5Y5_9EURY (Beta-galactosidase n=1 Tax=halophilic archaeon TaxID=29295 RepID=A0A365T5Y5_9EURY) HSP 1 Score: 193 bits (491), Expect = 3.880e-53 Identity = 96/225 (42.67%), Postives = 130/225 (57.78%), Query Frame = 1 Query: 4 KKWEDPTVFGIGRVSAHTDLAAFPSLEEAAATNFNRAASSSLISLDGDWRFLYSPKGEKGLPLDFETAGLDDTMWDTIEVPSNWQMKGYGIPIYTNTVYPIPVDPPRVPKQNPMGIYRRAVDIPTGWLAGDAEIRLIFQGADSTLEVWVNGHWVGYSQDSRLPES*RGALPAA-GSTRNGARVAQWSDATYLEDQDHWWLSGLHRSVELQRLPAAHLRDYRVATE 675 K W++P V G R+ H + +P ++++A + +R AS L+GDW F Y P +F DD WD IEVP +WQ++G+G P YT+T YP PVDPP VP +NP G+YRR +PT W D E+ L F+G DS VW+NG W+G+S+ SRLP R + G +V +WSD +YLEDQD WWLSG+ R V L P H D V ++ Sbjct: 3 KDWKNPRVTGRNRMRNHAYVLPYP--DQSSALSSSRVASPWFKLLNGDWAFSYISNPHNS-PQNFYAPSFDDADWDDIEVPQHWQLEGFGTPKYTDTAYPFPVDPPEVPTKNPTGLYRRTFQVPTSW--DDLEVILRFEGVDSAFSVWINGEWIGFSKGSRLPSEFRLTDEVSVGINTIAVKVIRWSDGSYLEDQDMWWLSGIFRDVSLYATPKIHAVDIDVQSK 222
BLAST of mRNA_H-akashiwo_Contig836.8.1 vs. uniprot
Match: A0A7C5AGE8_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Lentisphaerae bacterium TaxID=1932692 RepID=A0A7C5AGE8_9BACT) HSP 1 Score: 185 bits (469), Expect = 3.940e-53 Identity = 93/195 (47.69%), Postives = 117/195 (60.00%), Query Frame = 1 Query: 112 AASSSLISLDGDWRFLYSPKGEKGLPLDFETAGLDDTMWDTIEVPSNWQMKGYGIPIYTNTVYPIPVDPPRVPKQNPMGIYRRAVDIPTGWLAGDAEIRLIFQGADSTLEVWVNGHWVGYSQDSRLPES*RGALPAAGSTRNG------ARVAQWSDATYLEDQDHWWLSGLHRSVELQRLPAAHLRDYRVATEL 678 A S ++SL+G+WRF Y+ +P E A DD+ WD+I VP +WQ+ GYG P YTN YP PVDPPRVP +NP G+YRR +P W + I L+FQG DS +W+NG G+S+ SRLP R G ARV QWSD +YLEDQD WWLSG+ R V L +P H+RD+ V TEL Sbjct: 61 ATSPWVMSLNGEWRFHYAAT-PYDVPAGAEAAEYDDSAWDSIRVPMSWQLAGYGRPHYTNVAYPFPVDPPRVPDENPTGVYRRIFHVPGSW--ANMRIFLLFQGVDSAFHLWINGRPAGFSKGSRLPAE----FEITDLVRPGRDNALAARVYQWSDGSYLEDQDMWWLSGIFRDVHLVAMPRVHIRDFSVRTEL 248
BLAST of mRNA_H-akashiwo_Contig836.8.1 vs. uniprot
Match: A0A376MRZ3_ECOLX (Beta-D-galactosidase n=4 Tax=Enterobacteriaceae TaxID=543 RepID=A0A376MRZ3_ECOLX) HSP 1 Score: 183 bits (464), Expect = 4.500e-53 Identity = 99/225 (44.00%), Postives = 128/225 (56.89%), Query Frame = 1 Query: 1 RKKWEDPTVFGIGRVSAHTDLAAFPSLEEAAATNFNRAASSSLISLDGDWRFLYSPKGEKGLPLDFETAGLDDTMWDTIEVPSNWQMKGYGIPIYTNTVYPIPVDPPRVPKQNPMGIYRRAVDIPTGWLAGDAEIRLIFQGADSTLEVWVNGHWVGYSQDSRLP-ES*RGALPAAGSTRNGARVAQWSDATYLEDQDHWWLSGLHRSVELQRLPAAHLRDYRVAT 672 R+ WE+P V + R++AH A++ + EEA S L SL+G+WRF + P E +P + L + DT+ VPSNWQM GY PIYTN YPI V+PP VP +NP G Y +I WL + + R+IF G +S +W NG WVGY QDSRLP E A AG R V +WSD +YLEDQD W +SG+ R V L P + D+ VAT Sbjct: 14 RRDWENPGVTQLNRLAAHPPFASWRNSEEARTAR----PSQQLRSLNGEWRFAWFPAPE-AVPESWLECDLPEA--DTVVVPSNWQMHGYDAPIYTNVTYPITVNPPFVPAENPTGCYSLTFNIDESWLQ-EGQTRIIFDGVNSAFHLWCNGRWVGYGQDSRLPSEFDLSAFLRAGKNRLAVMVVRWSDGSYLEDQDMWRMSGIFRDVSLLHKPTTQISDFHVAT 230
BLAST of mRNA_H-akashiwo_Contig836.8.1 vs. uniprot
Match: A0A7C5BSH7_9BACT (Beta-galactosidase n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C5BSH7_9BACT) HSP 1 Score: 193 bits (490), Expect = 4.830e-53 Identity = 107/225 (47.56%), Postives = 128/225 (56.89%), Query Frame = 1 Query: 10 WEDPTVFGIGRVSAHTDLAAFPSLEEAAATNFNRAASSSLISLDGDWRFLYSPKGEKGLPLDFETAGLDDTMWDTIEVPSNWQMKGYGIPIYTNTVYPIPVDPPRVPKQNPMGIYRRAVDIPTGWLAGDAEIRLIFQGADSTLEVWVNGHWVGYSQDSRLPES*RGALPAAGSTRN--GARVAQWSDATYLEDQDHWWLSGLHRSVELQRLPAAHLRDYRVATEL 678 WE+P + R+ A +P E A F+ AAS + SL+G WRF YSP + P DF T G D T WD I+VPS WQM+GYG P YTN VYP PVDPPRVP +NP G Y R D+PT W D I L F G DS WVNG VG+S+ SR+P A + +N +V QWSD +Y EDQD WWLSG+ R V L P + D RV T L Sbjct: 4 WENPQIIHKSRLPARAYTFGYPDAESA--KTFDPAASPWVKSLNGVWRFDYSPTPVEA-PKDFYTPGFDATAWDEIDVPSCWQMQGYGRPHYTNVVYPFPVDPPRVPTENPTGSYLRDFDVPTDW--ADKRIILRFDGVDSAFYAWVNGKQVGFSKGSRIPAE-FDVTDAVNTGKNTLAVQVYQWSDGSYCEDQDMWWLSGIFRDVTLIAKPKTGIWDVRVRTSL 222 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig836.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig836.8.1 >prot_H-akashiwo_Contig836.8.1 ID=prot_H-akashiwo_Contig836.8.1|Name=mRNA_H-akashiwo_Contig836.8.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=93bp MWDTIEVPSNWQMKGYGIPIYTNTVYPIPVDPPRVPKQNPMGIYRRAVDIback to top mRNA from alignment at H-akashiwo_Contig836:322013..322909+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig836.8.1 ID=mRNA_H-akashiwo_Contig836.8.1|Name=mRNA_H-akashiwo_Contig836.8.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=897bp|location=Sequence derived from alignment at H-akashiwo_Contig836:322013..322909+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig836:322013..322909+ >mRNA_H-akashiwo_Contig836.8.1 ID=mRNA_H-akashiwo_Contig836.8.1|Name=mRNA_H-akashiwo_Contig836.8.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=279bp|location=Sequence derived from alignment at H-akashiwo_Contig836:322013..322909+ (Heterosigma akashiwo CCMP452)back to top |