mRNA_H-akashiwo_Contig82.36.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig82.36.1 vs. uniprot
Match: A0A7S1NZL4_9ALVE (Hypothetical protein n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1NZL4_9ALVE) HSP 1 Score: 136 bits (342), Expect = 2.120e-32 Identity = 76/154 (49.35%), Postives = 104/154 (67.53%), Query Frame = 1 Query: 1 HLVAAGKWGLKMSTPLPYPSLQIGSFGAETRLLSFAKNRKALFDFAVAGPAAGALASVALYLFGLAQTATATPEALATFPVVPGALFHTSLLAGILSAFVNPAVLLTPAASPVAVHPFAVAGLAGLIASALNFMPIGRLDGGRAS---MAAGRP 453 H +AA K K+S P PSLQ G+FGA TRL + +++K LFD A+AGPA G S+ ++ GLA T+ T EA+A++PV+P ALFH S L G+++ F++ +L +P+ VHP V+G G I +ALNFMPIGRLDGGRA+ +AAG P Sbjct: 511 HWLAAKKSNTKISLPFFIPSLQTGAFGAVTRLRDYPRSKKDLFDLAIAGPALGLATSLIFFVVGLALTSQGTNEAIASWPVLPAALFHNSFLLGLITDFLDKGLLAEKITTPMPVHPLVVSGFLGSIINALNFMPIGRLDGGRAATSALAAGAP 664
BLAST of mRNA_H-akashiwo_Contig82.36.1 vs. uniprot
Match: A0A0G4GLI0_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GLI0_VITBC) HSP 1 Score: 136 bits (342), Expect = 2.610e-32 Identity = 76/154 (49.35%), Postives = 104/154 (67.53%), Query Frame = 1 Query: 1 HLVAAGKWGLKMSTPLPYPSLQIGSFGAETRLLSFAKNRKALFDFAVAGPAAGALASVALYLFGLAQTATATPEALATFPVVPGALFHTSLLAGILSAFVNPAVLLTPAASPVAVHPFAVAGLAGLIASALNFMPIGRLDGGRAS---MAAGRP 453 H +AA K K+S P PSLQ G+FGA TRL + +++K LFD A+AGPA G S+ ++ GLA T+ T EA+A++PV+P ALFH S L G+++ F++ +L +P+ VHP V+G G I +ALNFMPIGRLDGGRA+ +AAG P Sbjct: 934 HWLAAKKSNTKISLPFFIPSLQTGAFGAVTRLRDYPRSKKDLFDLAIAGPALGLATSLIFFVVGLALTSQGTNEAIASWPVLPAALFHNSFLLGLITDFLDKGLLAEKITTPMPVHPLVVSGFLGSIINALNFMPIGRLDGGRAATSALAAGAP 1087
BLAST of mRNA_H-akashiwo_Contig82.36.1 vs. uniprot
Match: B8C9S6_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9S6_THAPS) HSP 1 Score: 131 bits (330), Expect = 1.980e-31 Identity = 69/148 (46.62%), Postives = 103/148 (69.59%), Query Frame = 1 Query: 1 HLVAAGKWGLKMSTPLPYPSLQIGSFGAETRLLSFAKNRKALFDFAVAGPAAGALASVALYLFGLAQTATATPEALATFPVVPGALFHTSLLAGILSAFVNPAVLLTPAASPVAVHPFAVAGLAGLIASALNFMPIGRLDGGRASMAA 444 H VAA K+ +K+ + +P PSLQ+G+FG+ T + SF +R ALFD A++GP L S+ L + GL+ T TA +A A+ P++P A+ +S L G +++ V P +++ P + P+ +HP + GLAGL+ SA+N +PIGRLDGGRASMAA Sbjct: 267 HHVAAKKYNVKLGSSVPLPSLQVGTFGSITPIRSFLSSRTALFDIAISGPGISMLVSLVLVVVGLSMTITA--KAFASLPMIPAAVVKSSFLIGSIASVVAPKIMMVPLSQPIPIHPLFMIGLAGLVMSAVNLLPIGRLDGGRASMAA 412
BLAST of mRNA_H-akashiwo_Contig82.36.1 vs. uniprot
Match: A0A7S1Z8L5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z8L5_9STRA) HSP 1 Score: 125 bits (315), Expect = 4.870e-31 Identity = 68/147 (46.26%), Postives = 97/147 (65.99%), Query Frame = 1 Query: 1 HLVAAGKWGLKMSTPLPYPSLQIGSFGAETRLLSFAKNRKALFDFAVAGPAAGALASVALYLFGLAQTATATPEALATFPVVPGALFHTSLLAGILSAFVNPAVLLTPAASPVAVHPFAVAGLAGLIASALNFMPIGRLDGGRASMA 441 H++ A +++ P+P PSLQIG+FG+ T L SF ++R AL D A+AGPA + S+AL + G+ T A+ EAL+ PVVP L +S G + + + P +++ P + PV VHP + GL GL++SALN +PIGRLDGGRA MA Sbjct: 30 HIIVARLRKIRIGLPVPLPSLQIGTFGSITPLRSFPESRSALLDVALAGPAVTIILSLALMMAGIILTKNASAEALSYMPVVPAVLMRSSFAVGSMVSLMAPKIMMLPLSQPVPVHPAFMVGLTGLVSSALNLLPIGRLDGGRACMA 176
BLAST of mRNA_H-akashiwo_Contig82.36.1 vs. uniprot
Match: K0T8T0_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T8T0_THAOC) HSP 1 Score: 127 bits (318), Expect = 2.910e-29 Identity = 68/147 (46.26%), Postives = 97/147 (65.99%), Query Frame = 1 Query: 1 HLVAAGKWGLKMSTPLPYPSLQIGSFGAETRLLSFAKNRKALFDFAVAGPAAGALASVALYLFGLAQTATATPEALATFPVVPGALFHTSLLAGILSAFVNPAVLLTPAASPVAVHPFAVAGLAGLIASALNFMPIGRLDGGRASMA 441 H++AA ++M P+P PSL+ G+FG+ T L SF +RKA+FD A++GP L S L + GL T TA+ + L FPV+ AL +S L G ++F++P ++L P A P VHP + G +GL++ ALN +PIGRLDGGRA+MA Sbjct: 450 HILAARVHKVEMGCPVPLPSLETGTFGSITPLRSFPSDRKAMFDIAISGPLVATLVSFLLIVSGLDLTVTASAQELERFPVISAALVKSSYLVGAAASFISPKLMLLPNAQPFPVHPLFLVGWSGLVSQALNILPIGRLDGGRAAMA 596
BLAST of mRNA_H-akashiwo_Contig82.36.1 vs. uniprot
Match: A0A835ZIQ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIQ3_9STRA) HSP 1 Score: 124 bits (310), Expect = 3.060e-29 Identity = 69/145 (47.59%), Postives = 96/145 (66.21%), Query Frame = 1 Query: 7 VAAGKWGLKMSTPLPYPSLQIGSFGAETRLLSFAKNRKALFDFAVAGPAAGALASVALYLFGLAQTATATPEALATFPVVPGALFHTSLLAGILSAFVNPAVLLTPAASPVAVHPFAVAGLAGLIASALNFMPIGRLDGGRASMA 441 +A+GK L + P+ PSLQ+G+FG T +F ++RK FD +VAGPA GA+ S+ + GL T AT +ALA FPVVP ALFH+S + G +++ P +L ++PV +HP AV G G+I +ALN MP+GRLDGGR + A Sbjct: 160 LASGKKNL-LGPPVFIPSLQVGTFGTITPFTTFPRDRKQAFDVSVAGPALGAVVSLGALIGGLLLTGGATTDALAAFPVVPAALFHSSAIIGTITSIALPQAMLQALSTPVPLHPLAVIGFTGVIVNALNLMPVGRLDGGRLAAA 303
BLAST of mRNA_H-akashiwo_Contig82.36.1 vs. uniprot
Match: A0A7S4JVC5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JVC5_9STRA) HSP 1 Score: 122 bits (306), Expect = 7.610e-28 Identity = 69/144 (47.92%), Postives = 90/144 (62.50%), Query Frame = 1 Query: 1 HLVAAGKWGLKMSTPLPYPSLQIGSFGAETRLLSFAKNRKALFDFAVAGPAAGALASVALYLFGLAQTATATPEALATFPVVPGALFHTSLLAGILSAFVNPAVLLTPAASPVAVHPFAVAGLAGLIASALNFMPIGRLDGGRA 432 H A + + P+P PSLQIG+FG+ T + SF + R L D A+AGP A A S+A+ + G+ T ++ EALA PVVP AL +S L G L + + P V P + PV +HP V GL GLI+SALN +PIGRLDGGRA Sbjct: 331 HAAVARAKNVTLGLPVPLPSLQIGTFGSITPIRSFPETRTDLMDVALAGPGATAALSLAMMIVGIGATVGSSEEALAAMPVVPAALLRSSFLVGSLVSVLAPKVAALPLSQPVPIHPLFVVGLTGLISSALNLLPIGRLDGGRA 474
BLAST of mRNA_H-akashiwo_Contig82.36.1 vs. uniprot
Match: A0A7S1ZJI8_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZJI8_TRICV) HSP 1 Score: 115 bits (289), Expect = 4.300e-26 Identity = 66/151 (43.71%), Postives = 97/151 (64.24%), Query Frame = 1 Query: 1 HLVAAGKWGLKMSTPLPYPSLQIGSFGAETRLLSFAKNRKALFDFAVAGPAAGALASVALYLFGLAQTATATPEALATFPVVPGALFHTSLLAGILSAFVNPAVLLTPAASPVAVHPFAVAGLAGLIASALNFMPIGRLDGGRA-SMAAGR 450 H++AA +++ P+P PSLQIG+FG T L +F K+R+ + D A++GP + S+ GL+ T A+ E+L + P+VP L +S L G L++ + P ++L P + PV VHP GL GL++SALN +P+GRLDGGRA S A GR Sbjct: 203 HVIAARLRDVEIGLPVPLPSLQIGTFGCITPLRTFPKSRRDMLDLALSGPLVTMVISLVAVGAGLSLTVGASAESLQSMPMVPAGLMKSSFLMGSLTSVLAPKIMLVPLSQPVPVHPLFTMGLTGLVSSALNLLPVGRLDGGRAFSSAFGR 353
BLAST of mRNA_H-akashiwo_Contig82.36.1 vs. uniprot
Match: B5Y5C7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y5C7_PHATC) HSP 1 Score: 115 bits (288), Expect = 3.020e-25 Identity = 67/155 (43.23%), Postives = 94/155 (60.65%), Query Frame = 1 Query: 1 HLVAAGKWGLKMSTPLPYPSLQIGSFGAETRLLSFAKNRKALFDFAVAGPAAGALASVALYLFGLAQTATATPEALATFPVVPGALFHTSLLAGILSAFVNPAVLLTPAASPVAVHPFAVAGLAGLIASALNFMPIGRLDGGRASMAA--GRPGA 459 H A + +K+ P PS Q+G+FG T L SF R+AL DF+++GP A L S+ + G++ T A+ ++TFP VP + +SLL GIL + + P V++ P P+ +HP AG GLI+SALN +PI R+DGGRA AA GR GA Sbjct: 454 HYFVAKQRDIKIGLPTTVPSTQLGTFGCVTPLKSFPTTREALLDFSLSGPVAAILMSIIMMSLGISATLNASAATISTFPTVPLTMLKSSLLTGILLSVLAPKVMMMPLPQPIPLHPIFFAGFVGLISSALNLLPIVRIDGGRACTAALGGRVGA 608
BLAST of mRNA_H-akashiwo_Contig82.36.1 vs. uniprot
Match: A0A1Z5J7G1_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J7G1_FISSO) HSP 1 Score: 113 bits (282), Expect = 1.780e-24 Identity = 63/149 (42.28%), Postives = 93/149 (62.42%), Query Frame = 1 Query: 1 HLVAAGKWGLKMSTPLPYPS--LQIGSFGAETRLLSFAKNRKALFDFAVAGPAAGALASVALYLFGLAQTATATPEALATFPVVPGALFHTSLLAGILSAFVNPAVLLTPAASPVAVHPFAVAGLAGLIASALNFMPIGRLDGGRASMA 441 HL+ A + G++ P+P PS L G FG T L SF +NR +LFD+A++GP G + S+ L +FGL T A+ AL+ FPV+ A S L G L++ + P V++ P + P+ +HP + G G+++SALN +P+ RLDGGRA A Sbjct: 414 HLLVARRNGIRTGKPVPIPSPYLHAGLFGCITPLRSFPRNRCSLFDWALSGPLTGIIVSLVLMIFGLHHTVNASHTALSRFPVISIAELKCSFLVGSLTSLIAPKVMMLPNSQPIPMHPLFMVGFTGILSSALNMLPVFRLDGGRACTA 562 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig82.36.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig82.36.1 >prot_H-akashiwo_Contig82.36.1 ID=prot_H-akashiwo_Contig82.36.1|Name=mRNA_H-akashiwo_Contig82.36.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=172bp MSTPLPYPSLQIGSFGAETRLLSFAKNRKALFDFAVAGPAAGALASVALYback to top mRNA from alignment at H-akashiwo_Contig82:1561305..1562165+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig82.36.1 ID=mRNA_H-akashiwo_Contig82.36.1|Name=mRNA_H-akashiwo_Contig82.36.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=861bp|location=Sequence derived from alignment at H-akashiwo_Contig82:1561305..1562165+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig82:1561305..1562165+ >mRNA_H-akashiwo_Contig82.36.1 ID=mRNA_H-akashiwo_Contig82.36.1|Name=mRNA_H-akashiwo_Contig82.36.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=516bp|location=Sequence derived from alignment at H-akashiwo_Contig82:1561305..1562165+ (Heterosigma akashiwo CCMP452)back to top |