mRNA_H-akashiwo_Contig81.6.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig81.6.1 vs. uniprot
Match: A0A7S3YAF2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAF2_HETAK) HSP 1 Score: 487 bits (1254), Expect = 5.990e-174 Identity = 243/246 (98.78%), Postives = 244/246 (99.19%), Query Frame = 1 Query: 1 MSPPPNVQHRVLLTVASVNDNTASDAPILMRSTSDPRLGTVILDVGETLLSLTASCTWKDQGWGNRKGQMLLRLCDELGQVKREFDMFGIAPHNESPAMFELTSPEDLAVVQPGDTVDVYYRVGGGGGHRLSVRNFKLAISTMSEEQAERQEEEAHRMEQAGTIAYTIMGNAGARVRNGPDLNSPVVGDLATGTVVEVTRVPPPEQADHPLVRSGRRVRVLEPLVGWVSRTAGNGTPILHTHSWDA 738 MSPPPNVQHRVLLTVASVNDNTASDAPILMRSTSDPRLGTVILDVGETLLSLTASCTWKDQGWGNRKGQMLLRLCDEL QVKREFDMFGIAPHNESPAMFELTSPEDLAVVQPGDTVDVYYRVGGGGGH LSVRNFKLAISTMSEEQAERQEEEAHRMEQAGTIAYTIMGNAGARVRNGPDLNSPVVG+LATGTVVEVTRVPPPEQADHPLVRSGRRVRVLEPLVGWVSRTAGNGTPILHTHSWDA Sbjct: 1 MSPPPNVQHRVLLTVASVNDNTASDAPILMRSTSDPRLGTVILDVGETLLSLTASCTWKDQGWGNRKGQMLLRLCDELRQVKREFDMFGIAPHNESPAMFELTSPEDLAVVQPGDTVDVYYRVGGGGGHSLSVRNFKLAISTMSEEQAERQEEEAHRMEQAGTIAYTIMGNAGARVRNGPDLNSPVVGELATGTVVEVTRVPPPEQADHPLVRSGRRVRVLEPLVGWVSRTAGNGTPILHTHSWDA 246
BLAST of mRNA_H-akashiwo_Contig81.6.1 vs. uniprot
Match: A0A7S3Y264_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y264_HETAK) HSP 1 Score: 297 bits (761), Expect = 3.640e-98 Identity = 156/242 (64.46%), Postives = 176/242 (72.73%), Query Frame = 1 Query: 34 LLTVASVNDNTASDAPILMRSTSDPRLGTVILDVGETLLSLTASCTWKDQGWGNRKGQMLLRLCDELGQVKREFDMFGIAPHNESPAMFELTSPEDLAVVQPGDTVDVYYRVGGGGGHRLSVRNFKLAISTMSEEQAERQ---EEEAHRMEQAGTIAYTIMGNAGARVRNGPDLNSPVVGDLATGTVVEVTRVPPPEQADHPLVRSGRRVRVLEPLVGWVSRTAGNGTPILHTHSWDAVAHE 750 LLTVASVND+ D P LM T LG GE L SLTASCTW DQGWGNRKGQMLLR+CD G+ +REFD+FGIAPH+ES A+FELTSP DL +QPGDT VYYRVGGGGGH LSVRNF L +ST+ +E + EEEAHR T AY ++G+ GARVR GP L++P VG+LA GTVVEV PPPE A HPLVRSGRRVRVL P+ GW SRT G+GTPIL HS AV HE Sbjct: 1 LLTVASVNDHRQEDEPRLMARTPGAVLGD-----GEALRSLTASCTWHDQGWGNRKGQMLLRVCDRRGRARREFDLFGIAPHSESHAVFELTSPADLGAIQPGDTAAVYYRVGGGGGHSLSVRNFMLTVSTIGKEVPRARMPREEEAHRNV---TAAYVVVGSGGARVRIGPGLDAPAVGELAAGTVVEVATPPPPEHAGHPLVRSGRRVRVLAPVAGWASRTTGDGTPILRAHSRAAVLHE 234
BLAST of mRNA_H-akashiwo_Contig81.6.1 vs. uniprot
Match: A0A7S2US05_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2US05_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 1.620e-16 Identity = 42/97 (43.30%), Postives = 59/97 (60.82%), Query Frame = 1 Query: 139 ETLLSLTASCTWKDQGWGNRKGQMLLRLCDELGQVKREFDMFGIAPHNESPAMFELTSPED---LAVVQPGDTVDVYYRVGGGGGHRLSVRNFKLAI 420 E L+ + A CTW DQGWGNRKGQ+ L +LG ++ D+FGIAPH + T +D ++ GD V + VGGGGGH+L+V+N +A+ Sbjct: 62 EHLVKVEAKCTWNDQGWGNRKGQIWL----QLGTSGQKLDLFGIAPHKRAVVSCVKTERDDPGFFNAIRAGDEVTLMVVVGGGGGHKLTVKNLSVAL 154
BLAST of mRNA_H-akashiwo_Contig81.6.1 vs. uniprot
Match: A0A1X7U8X6_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7U8X6_AMPQE) HSP 1 Score: 78.6 bits (192), Expect = 6.380e-15 Identity = 35/89 (39.33%), Postives = 51/89 (57.30%), Query Frame = 1 Query: 154 LTASCTWKDQGWGNRKGQMLLRLCDELGQVKREFDMFGIAPHNESPAMFELTSPEDLAVVQPGDTVDVYYRVGGGGGHRLSVRNFKLAI 420 L S WKDQGWGNRKG + L+L V ++ G+APH E A EL + + + GD + GGGGGH+L+V+N+++ + Sbjct: 28 LVISLKWKDQGWGNRKGDIFLKLMRGEEAVAVKYHPLGVAPHKEEEARTELMNEPIVTEARAGDYYEFSRNPGGGGGHKLTVKNYRVVV 116
BLAST of mRNA_H-akashiwo_Contig81.6.1 vs. uniprot
Match: UPI00106CB057 (uncharacterized protein LOC114531355 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106CB057) HSP 1 Score: 70.5 bits (171), Expect = 2.220e-11 Identity = 35/93 (37.63%), Postives = 52/93 (55.91%), Query Frame = 1 Query: 154 LTASCTWKDQGWGNRKGQMLLRLCD-ELGQVK---REFDMFGIAPHNESPAMFELTSPEDLAVVQPGDTVDVYYRVGGGGGHRLSVRNFKLAI 420 + AS WKDQGWGNRKG+++++L + GQ K +MFGIA H ++ + + +PGD GGGGGH L+V+ F + + Sbjct: 74 MRASVQWKDQGWGNRKGRLMVKLMRRDSGQNKVIAENNNMFGIAEHKMKSDTCKIVDHPVIKLSEPGDFYSFERNAGGGGGHTLTVKEFSVLL 166
BLAST of mRNA_H-akashiwo_Contig81.6.1 vs. uniprot
Match: A0A6S7HQP9_PARCT (LRR-GTPase of the ROCO family n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HQP9_PARCT) HSP 1 Score: 69.3 bits (168), Expect = 6.290e-11 Identity = 35/95 (36.84%), Postives = 54/95 (56.84%), Query Frame = 1 Query: 160 ASCTWKDQGWGNRKGQMLLRLCD-ELGQ---VKREFDMFGIAPHNESPAMFELTSPEDLAVVQPGDTVDVYYRVGGGGGHRLSVRNFKLAISTMS 432 AS WKDQGWGNRKGQ++++L + GQ + + ++FGIA H+ + + + + + +PGD GGGGGH L R F + + +S Sbjct: 76 ASVEWKDQGWGNRKGQLIVKLMRRDSGQNMVIAEKTNIFGIAGHDWANSTCVFVTHPVVKLAEPGDFYRFERNAGGGGGHSLFARKFTVLLEFLS 170
BLAST of mRNA_H-akashiwo_Contig81.6.1 vs. uniprot
Match: X6LYQ5_RETFI (Uncharacterized protein (Fragment) n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6LYQ5_RETFI) HSP 1 Score: 71.6 bits (174), Expect = 1.270e-10 Identity = 36/101 (35.64%), Postives = 57/101 (56.44%), Query Frame = 1 Query: 142 TLLSLTASCTWKDQGWGNRKGQMLLRLCDELGQVKREFDMFGIAPHN-ESPAMFELTSPEDLAVVQPGDTVDVYYRVGGGGGHRL-------SVRNFKLAI 420 T+ S+ SC WKDQGWGN+K ++ LR+ D G+ K++ D+FGIA H+ ++ + E + + GD++ VG GGGH + S N+ L + Sbjct: 402 TVESIVISCQWKDQGWGNQKSRIYLRIIDPSGRPKQDVDIFGIASHHWQNVTKTYDGNTEIIKAIAKGDSLQFARYVGSGGGHEVLFFFYVSSFYNYVLCV 502
BLAST of mRNA_H-akashiwo_Contig81.6.1 vs. uniprot
Match: UPI00077AE364 (uncharacterized protein LOC107339115 n=2 Tax=Acropora TaxID=6127 RepID=UPI00077AE364) HSP 1 Score: 68.6 bits (166), Expect = 1.350e-10 Identity = 38/99 (38.38%), Postives = 51/99 (51.52%), Query Frame = 1 Query: 133 VGETLLSLTASCTWKDQGWGNRKGQMLLRL----CDELGQVKREF-DMFGIAPHNESPAMFELTSPEDLA-VVQPGDTVDVYYRVGGGGGHRLSVRNFK 411 + T++ L+ S TW DQGWGNRKG++ L L D L + E+ +FGIA H E + + +PGD GGGGGHRL V F+ Sbjct: 71 LSSTVMKLSMSVTWLDQGWGNRKGELFLVLMRPNADGLAEKVAEYRGLFGIAEHKEETRETVINKQHPVVNEAKPGDFYRFMRNAGGGGGHRLIVTEFR 169
BLAST of mRNA_H-akashiwo_Contig81.6.1 vs. uniprot
Match: A0A2D5RS70_9GAMM (PEP-CTERM domain-containing protein n=1 Tax=Rheinheimera sp. TaxID=1869214 RepID=A0A2D5RS70_9GAMM) HSP 1 Score: 65.1 bits (157), Expect = 1.920e-9 Identity = 40/131 (30.53%), Postives = 67/131 (51.15%), Query Frame = 1 Query: 49 SVNDNTASDAPILMRSTSDPRLGTVILDVGETLLSLTASCTWKDQGWGNRKGQMLLRLCDELGQVKREFD--MFGIAPHNESPAMFELTSPEDLAVVQPGDTVDVYYRVGGGGGHRLSVRNFKLAISTMSE 435 ++ND T SD IL ++ + +++ TW+DQGWGNRKG++ ++ D FD +A HN + F + +D+ G + +YY VGGGGGHRL + + ++I+++ E Sbjct: 31 NINDATPSDGLILWN---------MLDEFQGRMVAFELMMTWRDQGWGNRKGRVFYQIND--------FDPVYLDLAEHNLTSETFSI---QDITA-PAGSVLRLYYTVGGGGGHRLLISDASISITSVPE 140
BLAST of mRNA_H-akashiwo_Contig81.6.1 vs. uniprot
Match: UPI000A1707A8 (PEP-CTERM sorting domain-containing protein n=1 Tax=Cognaticolwellia mytili TaxID=1888913 RepID=UPI000A1707A8) HSP 1 Score: 65.5 bits (158), Expect = 2.090e-9 Identity = 41/111 (36.94%), Postives = 57/111 (51.35%), Query Frame = 1 Query: 127 LDVGETLLSLTASCTWKDQGWGNRKGQMLLRLCDELGQVKREFDMFG---IAPHNESPAMFELTSPEDLAV----VQPGD--TVDVYYRVGGGGGHRLSVRNFKLAISTMS 432 ++V + SLT S W DQGWGNRKGQ+ RL FD +A H +T E +AV + P T+++ Y VGGGGGHRL +R+ L ++ +S Sbjct: 50 VNVTDDFYSLTLSLDWYDQGWGNRKGQINFRL--------NNFDWLSSGLLANHRLLSESVTITRAELIAVNTLSLAPSSPTTLEIGYVVGGGGGHRLHIRDASLTVTNVS 152 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig81.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig81.6.1 >prot_H-akashiwo_Contig81.6.1 ID=prot_H-akashiwo_Contig81.6.1|Name=mRNA_H-akashiwo_Contig81.6.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=250bp MSPPPNVQHRVLLTVASVNDNTASDAPILMRSTSDPRLGTVILDVGETLLback to top mRNA from alignment at H-akashiwo_Contig81:348967..349716+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig81.6.1 ID=mRNA_H-akashiwo_Contig81.6.1|Name=mRNA_H-akashiwo_Contig81.6.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=750bp|location=Sequence derived from alignment at H-akashiwo_Contig81:348967..349716+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig81:348967..349716+ >mRNA_H-akashiwo_Contig81.6.1 ID=mRNA_H-akashiwo_Contig81.6.1|Name=mRNA_H-akashiwo_Contig81.6.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=750bp|location=Sequence derived from alignment at H-akashiwo_Contig81:348967..349716+ (Heterosigma akashiwo CCMP452)back to top |