mRNA_H-akashiwo_Contig81.5.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig81.5.1 vs. uniprot
Match: A0A6V1TQR2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TQR2_HETAK) HSP 1 Score: 184 bits (466), Expect = 1.710e-56 Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 2 Query: 2 VDAGVAARDMAVACAAGRVAGETVVDLNYMEQNSGGVYLPVAILPKRNKIVLAMMDSKLPLEVFEEVLQVAMEACQEVYSVLQNEVREHASKVLSSRLG 298 VDAGVAARDMAVACAAGRVAGETVVDLNYMEQNSGGVYLPVAILPKRNKIVLAMMDSKLPLEVFEEVLQVAMEACQEVYSVLQNEVREHASKVLSSRLG Sbjct: 149 VDAGVAARDMAVACAAGRVAGETVVDLNYMEQNSGGVYLPVAILPKRNKIVLAMMDSKLPLEVFEEVLQVAMEACQEVYSVLQNEVREHASKVLSSRLG 247
BLAST of mRNA_H-akashiwo_Contig81.5.1 vs. uniprot
Match: A0A7S2V0R5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0R5_9STRA) HSP 1 Score: 122 bits (307), Expect = 1.510e-32 Identity = 60/99 (60.61%), Postives = 81/99 (81.82%), Query Frame = 2 Query: 2 VDAGVAARDMAVACAAGRVAGETVVDLNYMEQNSGGVYLPVAILPKRNKIVLAMMDSKLPLEVFEEVLQVAMEACQEVYSVLQNEVREHASKVLSSRLG 298 VDAGV +DM VAC AG + ++DLNY+E++SGG LP+A++PKRN++VLA MD+KLPL+VFE VL+ A +AC +V++VL NE+REHASK+LS RLG Sbjct: 143 VDAGVGMKDMVVACTAGFIEATPIMDLNYVEESSGGPCLPLAVMPKRNEVVLAQMDAKLPLDVFEAVLETARQACDQVHTVLSNELREHASKMLSCRLG 241
BLAST of mRNA_H-akashiwo_Contig81.5.1 vs. uniprot
Match: D7FUB0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUB0_ECTSI) HSP 1 Score: 113 bits (282), Expect = 8.810e-29 Identity = 57/98 (58.16%), Postives = 80/98 (81.63%), Query Frame = 2 Query: 2 VDAGVAARDMAVACAAGRVAGETVVDLNYMEQNSGGVYLPVAILPKRNKIVLAMMDSKLPLEVFEEVLQVAMEACQEVYSVLQNEVREHASKVLSSRL 295 VDAGVA D+ VAC+AG + G V+DLNY+EQ GG YLPVA+LP+++K++LA M+S+LPLE+FEEVL+ A +ACQ+V+ VL+ V+EHA +LSS++ Sbjct: 147 VDAGVAMSDLVVACSAGYLDGMPVMDLNYVEQALGGPYLPVAVLPEKDKLLLAKMESRLPLEIFEEVLRAATDACQQVHEVLRAAVKEHAGALLSSQI 244
BLAST of mRNA_H-akashiwo_Contig81.5.1 vs. uniprot
Match: A0A835YHF5_9STRA (Ribosomal protein S5 domain 2-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHF5_9STRA) HSP 1 Score: 110 bits (276), Expect = 7.110e-28 Identity = 50/97 (51.55%), Postives = 83/97 (85.57%), Query Frame = 2 Query: 5 DAGVAARDMAVACAAGRVAGETVVDLNYMEQNSGGVYLPVAILPKRNKIVLAMMDSKLPLEVFEEVLQVAMEACQEVYSVLQNEVREHASKVLSSRL 295 DAG++ RDM V+C+AG V G+ V+DLN+MEQ+ GG Y+P+AILP+ ++I+LA M+++LPL++F+EVL A+EAC++V+++++ EVREH + +L+++L Sbjct: 147 DAGISMRDMVVSCSAGHVDGQAVMDLNHMEQSHGGAYVPLAILPRGSEILLAKMEARLPLDIFQEVLATALEACRQVHAIMRGEVREHHAALLAAQL 243
BLAST of mRNA_H-akashiwo_Contig81.5.1 vs. uniprot
Match: A0A7S2STJ1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STJ1_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 1.370e-20 Identity = 48/99 (48.48%), Postives = 68/99 (68.69%), Query Frame = 2 Query: 2 VDAGVAARDMAVACAAGRVAGETVVDLNYMEQNSGGVYLPVAILPKRNKIVLAMMDSKLPLEVFEEVLQVAMEACQEVYSVLQNEVREHASKVLSSRLG 298 +DAG+A +D VAC+AG V + V+D+N EQ GG YLPVAILP + IVLA MD K+PL F ++L VAM C +++ +L+ EVREH+ + + + G Sbjct: 146 MDAGIAMKDFLVACSAGVVDKQAVMDVNRKEQLGGGAYLPVAILPGSDSIVLAEMDCKMPLGNFSDLLSVAMSGCHQMHQILREEVREHSKSLFNMQAG 244
BLAST of mRNA_H-akashiwo_Contig81.5.1 vs. uniprot
Match: D2VEP3_NAEGR (Predicted protein n=2 Tax=Naegleria TaxID=5761 RepID=D2VEP3_NAEGR) HSP 1 Score: 87.8 bits (216), Expect = 6.090e-19 Identity = 40/97 (41.24%), Postives = 69/97 (71.13%), Query Frame = 2 Query: 2 VDAGVAARDMAVACAAGRVAGETVVDLNYMEQNSGGVYLPVAILPKRNKIVLAMMDSKLPLEVFEEVLQVAMEACQEVYSVLQNEVREHASKVLSSR 292 +DAG+ +D V+CAAG + G + DLNY+E +GG +P+A+LPK +K+ L MDSKL L+ FE+VL+ A+E C++++ V+ ++++H +++ R Sbjct: 147 LDAGIPMKDFVVSCAAGFIQGSPLTDLNYIEDCAGGPDVPIALLPKHDKVTLLQMDSKLSLDQFEKVLEHAIEGCKQIHKVIDEQLKKHTYALVNKR 243
BLAST of mRNA_H-akashiwo_Contig81.5.1 vs. uniprot
Match: A0A7S4G6J0_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4G6J0_9EUGL) HSP 1 Score: 84.7 bits (208), Expect = 1.070e-18 Identity = 46/97 (47.42%), Postives = 62/97 (63.92%), Query Frame = 2 Query: 2 VDAGVAARDMAVACAAGRVAGETVVDLNYMEQNSGGVYLPVAILPKRNKIVLAMMDSKLPLEVFEEVLQVAMEACQEVYSVLQNEVREHASKVLSSR 292 VDAG+ RD VAC AG + ++D+N ME +GG LPVAILP+ K+ MDSK+ LE+F+EVL A+ C V+ VL++ +R HA L SR Sbjct: 44 VDAGIPMRDFLVACTAGYIDEVPLIDINRMEIAAGGPELPVAILPQSKKVAFLQMDSKVALEMFDEVLATAVAGCGMVHKVLEDAIRSHAHSKLESR 140
BLAST of mRNA_H-akashiwo_Contig81.5.1 vs. uniprot
Match: K3WFJ9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFJ9_GLOUD) HSP 1 Score: 83.2 bits (204), Expect = 5.610e-17 Identity = 45/97 (46.39%), Postives = 62/97 (63.92%), Query Frame = 2 Query: 2 VDAGVAARDMAVACAAGRVAGETVVDLNYMEQNSGGVYLPVAILPKRNKIVLAMMDSKLPLEVFEEVLQVAMEACQEVYSVLQNEVREHASKVLSSR 292 +DAG+A D VA +AG + + DLNY E+ + L +A+ P+ K+ L M+ KLPLEVFE ++ VAM+ C +VY +LQN VREH K L SR Sbjct: 178 IDAGIALNDFVVASSAGYLQQSLLCDLNYSEEAARAPQLVIALNPRTQKLNLLQMECKLPLEVFESLMNVAMDGCNQVYDLLQNAVREHTWKRLRSR 274
BLAST of mRNA_H-akashiwo_Contig81.5.1 vs. uniprot
Match: A0A5D6Y093_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y093_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 2.530e-16 Identity = 45/97 (46.39%), Postives = 62/97 (63.92%), Query Frame = 2 Query: 2 VDAGVAARDMAVACAAGRVAGETVVDLNYMEQNSGGVYLPVAILPKRNKIVLAMMDSKLPLEVFEEVLQVAMEACQEVYSVLQNEVREHASKVLSSR 292 +DAG+A D VA +AG + + DLNY E+++ L +A+ P+ K+ L M+ KLPLEVFE ++ VAME C +VY +LQ VREH K L SR Sbjct: 166 IDAGIALDDFVVASSAGYLQQTLLCDLNYQEESARAPQLVMALNPRTQKLNLLQMECKLPLEVFESLMGVAMEGCNQVYELLQTAVREHTWKQLRSR 262
BLAST of mRNA_H-akashiwo_Contig81.5.1 vs. uniprot
Match: A0A0A0KNI9_CUCSA (Uncharacterized protein n=3 Tax=Cucumis TaxID=3655 RepID=A0A0A0KNI9_CUCSA) HSP 1 Score: 80.5 bits (197), Expect = 3.340e-16 Identity = 38/98 (38.78%), Postives = 67/98 (68.37%), Query Frame = 2 Query: 5 DAGVAARDMAVACAAGRVAGETVVDLNYMEQNSGGVYLPVAILPKRNKIVLAMMDSKLPLEVFEEVLQVAMEACQEVYSVLQNEVREHASKVLSSRLG 298 DAG+ RD+ +C+AG + ++DLNY+E ++GG + V LPK +K+ L MD+KLP++VFE+V+++A+E C+ + + ++N + EH ++ R G Sbjct: 144 DAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAKLPIDVFEDVMELAIEGCKAIATYIRNVMLEHTKQLEYHRDG 241 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig81.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig81.5.1 >prot_H-akashiwo_Contig81.5.1 ID=prot_H-akashiwo_Contig81.5.1|Name=mRNA_H-akashiwo_Contig81.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=91bp MAVACAAGRVAGETVVDLNYMEQNSGGVYLPVAILPKRNKIVLAMMDSKLback to top mRNA from alignment at H-akashiwo_Contig81:244409..248412+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig81.5.1 ID=mRNA_H-akashiwo_Contig81.5.1|Name=mRNA_H-akashiwo_Contig81.5.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=4004bp|location=Sequence derived from alignment at H-akashiwo_Contig81:244409..248412+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig81:244409..248412+ >mRNA_H-akashiwo_Contig81.5.1 ID=mRNA_H-akashiwo_Contig81.5.1|Name=mRNA_H-akashiwo_Contig81.5.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=273bp|location=Sequence derived from alignment at H-akashiwo_Contig81:244409..248412+ (Heterosigma akashiwo CCMP452)back to top |