mRNA_H-akashiwo_Contig809.7.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig809.7.1 vs. uniprot
Match: A0A7R9ZKT3_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZKT3_9STRA) HSP 1 Score: 210 bits (535), Expect = 1.050e-62 Identity = 111/252 (44.05%), Postives = 157/252 (62.30%), Query Frame = 1 Query: 43 TSIIVMDPCSTRAQRLLETFDGKLCDVSSVLIEEMRDDKPMDLGAAKVGDFNENLSYAMQDGRGLLSVIQQARMNQGMEGAVHESSPHLLQEVARFEAALQEAVGDSSGIIEYQGSFMKTDTTIPQPPHVDFKWELLQEEKDRFFIAFFPLTDEGMFLQLWPNRCKTETTSGFIVYIPQGKLLMVPSDTVHGGGFKAGENGNLRFHLYVASGGASLPITHTNKYTEEDDPTKEMSDRLIDSSCLKELVGPFF 798 TSII+MD ++R + L ++G+L ++ + +R P + +A+V DFNEN+S+AM + R L + ++ A + + V FE L+ AVGD +I+YQGSF+KT+ T+PQP HVDF WE L +E D+ FI FFPL+DEGMFLQLW N E G +V++P GKLL++P+ TVHGGGF+ E+GN RFHLY+AS G LP NKYTE ++ +E+ +RL D+ L L F Sbjct: 132 TSIILMDGINSRCMQTLSQYNGRLSNLDPSFVRHVRSIMP-NQPSARVADFNENISFAMLNQRKLRHLASRS--------AEKDQESIVADLVDEFENKLRWAVGDD--VIDYQGSFLKTEATVPQPAHVDFTWEYLDQEDDKLFIGFFPLSDEGMFLQLWCNTKPGEPELGQMVFVPPGKLLVLPASTVHGGGFRTCESGNPRFHLYIASHGRPLPDHQQNKYTERNNKARELCERLTDAQGLDVLTDVLF 372
BLAST of mRNA_H-akashiwo_Contig809.7.1 vs. uniprot
Match: B8C3F2_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3F2_THAPS) HSP 1 Score: 201 bits (511), Expect = 2.810e-59 Identity = 116/282 (41.13%), Postives = 173/282 (61.35%), Query Frame = 1 Query: 1 HSRSELRHFYDQLRTSIIVMDPCSTRAQRLLETFDGKLCDVSSVLIEEMRDDKPMDLGAAKVGDFNENLSYAMQD-GRGLLSVIQQARMNQGMEGAVHESSPHLLQEVARFEAALQEAVGDSSGIIEYQGSFMKTDTTIPQPPHVDFKWELLQEEKDRFFIAFFPLTDEGMFLQLWPNRCKTE-----TTSGFIVYIPQGKLLMVPSDTVHGGGFKAGENGNLRFHLYV--------ASGGASLPITHTNKYTEEDDPTKEMSDRLIDSSCLKELVGPFFDN 804 HS +E H +SI+V+D S + Q LL+T+ L D+ + L+E +RD P L AA+VGDFNENL Y MQD + + S+I ++ G+ G + L ++V FE+A++EA+ ++Y+GS+++T+ T+ QP HVD+ + +L++ + F+AFFPLT EG FLQLW K + T G +VY+P GK+L+VPSDT+HGGGFK G GNLRFHLY+ A L N+YTEE D +E+ +R +D++ L L+G FF++ Sbjct: 86 HSLTEDEHHLCDALSSIVVLDSHSCKVQGLLDTYSAHLIDMGNHLLEGLRDCAPTQL-AARVGDFNENLFYEMQDCEKDIGSII----LDSGVVGGDVDRIL-LNKDVQEFESAIREALKHDK--LDYRGSYLQTEQTMYQPAHVDYDYHILKQYGGKLFLAFFPLTTEGTFLQLWKATTKDDYDDSTTVEGTVVYVPYGKMLIVPSDTIHGGGFKRGCTGNLRFHLYIELLEDDNEAFQQGELLNHPMNRYTEEHDRRRELCERFVDANGLDRLLGVFFED 359
BLAST of mRNA_H-akashiwo_Contig809.7.1 vs. uniprot
Match: K0S6F9_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S6F9_THAOC) HSP 1 Score: 195 bits (496), Expect = 3.840e-56 Identity = 108/267 (40.45%), Postives = 158/267 (59.18%), Query Frame = 1 Query: 49 IIVMD-PCSTRAQRLLETFDGKLCDVSSVLIEEMRDDKPMDLGAAKVGDFNENLSYAMQDGR-GLLSVIQQA--RMNQGMEGAVHESSPHLLQEVARFEAALQEAVGDSSGIIEYQGSFMKTDTTIPQPPHVDFKWELLQEEKDRFFIAFFPLTDEGMFLQLWPNRCKTET-TSGFIVYIPQGKLLMVPSDTVHGGGFKAGENGNLRFHLYVA-----------SGGASLPITHTNKYTEEDDPTKEMSDRLIDSSCLKELVGPFFD 801 ++ +D P +L+ D +L V + L+ +R+ P D AA+VGD+NENL Y M+ G + +I+ A R++ G +G+ + + +V FE +L+ A+G + Y+GSFM+TD +IPQP HVD+ + +L E R +AFFPLT+EG +LQLW + E T G +V+IP G++L+VPSDT+HGGGF+ G GNLRFHLYV GG L N+YTE D +E+ +R +D+ L LVG FFD Sbjct: 179 VVALDSPSRPEVAAILQRHDARLVHVGADLLRGLREAAP-DRLAARVGDYNENLMYEMRGGDLDVAGIIRSAGRRLDDGGDGSARDHGGMPVDDVRDFETSLRRALGHDD--LRYRGSFMRTDVSIPQPAHVDYDYPVLSEHGRRLHLAFFPLTEEGCYLQLWQHEDDAEVETEGTVVHIPHGRMLIVPSDTIHGGGFRRGPTGNLRFHLYVELLGDGNTEEEEDGGPRLLDRPVNRYTERHDRRRELCERYVDARGLDRLVGTFFD 442
BLAST of mRNA_H-akashiwo_Contig809.7.1 vs. uniprot
Match: A0A7S2IH65_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IH65_9STRA) HSP 1 Score: 187 bits (474), Expect = 1.780e-54 Identity = 109/274 (39.78%), Postives = 156/274 (56.93%), Query Frame = 1 Query: 1 HSRSELRHFYDQLRTS-------IIVMDPCSTRAQRLLETFDGKLCDVSSVLIEEMRDDKPMDLGAAKVGDFNENLSYAMQDGRGLLSVIQQARMNQGMEGAVHESSPHLLQEVARFEAALQEAVGDSSGIIEYQGSFMKTDTTIPQPPHVDFKWELLQEEKDRFFIAFFPLTDEGMFLQLWPNRCKTETT-SGFIVYIPQGKLLMVPSDTVHGGGFKAGENGNLRFHLYVASGGASLPITHTNKYTEEDDPTKEMSDRLIDSSCLKELVGPFF 798 H E R D L+ I+V+D S R Q+ L +F G L ++ I+ ++ P+ A+V DFN+NL Y MQ +GL + + E LLQ G ++ ++ GS++ TDTTIPQPPHVD+ WE+L+E + FFPLT+EGMFLQ+WP R K E G IV++P GKLL++P+ T+HGGGF+ NGNLRFHLY+++ LP TNKYTE DD ++E+S+R +++ +KEL+ F Sbjct: 55 HGNDENRKSNDPLQNKLIEALQGIVVLDS-SVRHQKWLISFRGILHNLPEAWIQRVKAQSPIQF-TARVADFNDNLFYQMQPQKGLQHL------------GLGELQGGLLQ-------------GQANDVL---GSYLHTDTTIPQPPHVDYTWEILEEHGSDLQVGFFPLTEEGMFLQVWPTRPKEEKIIEGQIVFVPYGKLLVLPATTIHGGGFRTNTNGNLRFHLYLST--TKLPTHQTNKYTEPDDKSRELSERYVNNPHMKELLEHLF 296
BLAST of mRNA_H-akashiwo_Contig809.7.1 vs. uniprot
Match: A0A7S4T7Z9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T7Z9_9STRA) HSP 1 Score: 179 bits (454), Expect = 1.710e-51 Identity = 95/244 (38.93%), Postives = 140/244 (57.38%), Query Frame = 1 Query: 82 QRLLETFDGKLCDVSSVLIEEMRDDKPMDLGAAKVGDFNENLSYAMQDGRGLLSVIQQARMNQGMEGAVHESSPHLLQEVARFEAALQEAVGDSSGIIEYQGSFMKTDTTIPQPPHVDFKWELLQEEKDRFFIAFFPLTDEGMFLQLWPNR-----CKTETTSGFIVYIPQGKLLMVPSDTVHGGGFKAGENGNLRFHLYVASGGASLPITHTNKYTEEDDPTKEMSDRLIDSSCLKELVGPFF 798 Q L F+G L D+ LI ++ P+ +A+V DFN+NL Y MQ +GL + N +EG +++ GSF+ TD+T+PQPPHVD+ WE+L+E + FFPLT+EGMFLQ+WP + ++ G I+YIP GKLL++P+ T+HGGGF+ NGNLRFHLY++ + LP TNKYTE +D ++E+S+R I++ ++EL+ F Sbjct: 83 QSWLNDFNGTLYDLPEALIRHVKTQAPVQF-SARVADFNDNLFYQMQSQKGLQHLGLAKLQNGLLEGQANDAL----------------------------GSFLNTDSTVPQPPHVDYTWEILEEHGGELQLGFFPLTEEGMFLQVWPTQPPHGASLEKSIHGQIIYIPYGKLLVLPATTIHGGGFRTSANGNLRFHLYLSH--SKLPDHQTNKYTEPNDKSRELSERYINAPYMEELLEHLF 295
BLAST of mRNA_H-akashiwo_Contig809.7.1 vs. uniprot
Match: A0A448YY94_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YY94_9STRA) HSP 1 Score: 176 bits (446), Expect = 1.230e-49 Identity = 109/284 (38.38%), Postives = 147/284 (51.76%), Query Frame = 1 Query: 31 DQLRTSIIVMDPCSTRAQRLLETFDGKLCDVSSVLIEEMRDDKPMDLGAAKVGDFNENLSYAMQDGRGLLSVIQQARMNQGMEGAVHESSPHLLQEVARFEAALQEAVGDSSGIIEYQGSFMKTDTTIPQPPHVDFKWELLQEEKD-------RFFIAFFPLTDEGMFLQLWPNRCKTETTS----GFIVYIPQGKLLMVPSDTVHGGGFK---------------AGEN--GNLRFHLYVASGGASLPITHTNKYTEEDDPTKEMSDRLIDSSCLKELVGPFF 798 D L + I++ D LE F G+L VSS L +E+R P + V DFN+NL Y +Q E P R A++EA+ + + EY GSF+ T +TIPQP HVD+ WE+L++ D + FFPLT+EGMFLQ+WP C + S G +V+IP GK+L++P+ T+HGGGF+ +G N GNLRFHLY A+ ASLP TNKYTE D TKE+S R +DS + L+ FF Sbjct: 94 DSLSSIIVLRD--EXEHSEWLEQFGGQLSXVSSELCQELRKHAPDLYNMSTVADFNDNLCYHVQ----------------------REKGPE--HPAPRTNRAIEEALETTLEVAEYLGSFLATKSTIPQPAHVDYPWEVLEKHGDGDHQSPGHLKLGFFPLTEEGMFLQVWPTACPXQDRSIEIEGQLVFIPYGKMLVLPASTIHGGGFRTTPFESEYSTXGSRSSGFNCGGNLRFHLYXATDDASLPAHQTNKYTERCDKTKELSRRYVDSRHMSVLLDHFF 351
BLAST of mRNA_H-akashiwo_Contig809.7.1 vs. uniprot
Match: A0A7S4ELI2_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ELI2_9STRA) HSP 1 Score: 173 bits (438), Expect = 3.900e-48 Identity = 112/301 (37.21%), Postives = 150/301 (49.83%), Query Frame = 1 Query: 43 TSIIVMDPCSTRAQRLLETFDGKLCDVSSVLIEEMRDDKPMDLGAAKVGDFNENLSYAMQDGRGLLSVIQQARMNQGMEGAVHESSPHLLQEVARFEAALQEAVGDSSGIIEYQGSFMKTDTTIPQPPHVDFKWELLQEEK--DRFFIAFFPLTDEGMFLQLWPNRC--------------------KTETTSGFIVYIPQGKLLMVPSDTVHGGGFKA---------------------------GENGNLRFHLYVASGGASLPITHTNKYTEEDDPTKEMSDRLIDSSCLKELVGPFF 798 +SI+V+D + L FDG+L VSS L++E+R P + V DFN+NL Y MQ RGL + G H++ + E AL + EY GSF+ T ++IPQP HVD+ WE+L++ +AFFPLT+EGMFLQ+WP+ K G IV+IP GKLL+VP+ T+HGGGF+ G GNLRFHLY+A+ ASLP TNKYTE D TKE+S R +DS ++ L+ FF Sbjct: 107 SSIVVLDD-EAEKKDWLNRFDGQLSVVSSELLQELRKHAPGLNTMSTVADFNDNLFYHMQQERGL----------EHFPGIGHDT-------LRELEGALLQQAN------EYLGSFLTTKSSIPQPAHVDYPWEVLEKHAGDQSLKLAFFPLTEEGMFLQIWPHAAGSGSGTMPGSSQAAADRSTEKLHAVEGEIVFIPYGKLLIVPASTIHGGGFRTTPLPMPLGREEIDAAAXXXXXXXXXXTGSGGNLRFHLYIATKDASLPAHQTNKYTERFDKTKELSRRYVDSKHMQILLESFF 383
BLAST of mRNA_H-akashiwo_Contig809.7.1 vs. uniprot
Match: A0A7S2LQ58_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LQ58_9STRA) HSP 1 Score: 167 bits (422), Expect = 6.910e-47 Identity = 88/204 (43.14%), Postives = 129/204 (63.24%), Query Frame = 1 Query: 82 QRLLETFDGKLCDVSSVLIEEMRDDKPMDLGAAKVGDFNENLSYAMQDGRGLLSVIQQARMNQGMEGAVHESSPHLLQEVARFEAALQEAVGDSSGIIEYQGSFMKTDTTIPQPPHVDFKWELLQEEKDRFFIAFFPLTDEGMFLQLWPNRCKTETTSG-------FIVYIPQGKLLMVPSDTVHGGGFKAGENGNLRFHLYVA 672 Q LL + G L D S L+E +R+ P L AA+VGD+NENL Y MQD +S I ++G H+ L +++ FE+++ ++ ++ + Y+GSFM+T++TI QP HVD+ + +L++ + F+AFFPLT EG +LQLW K E G +V+IP GK+L++PSDT+HGGGFK G +GNLRFHLY+A Sbjct: 71 QSLLSAYKGHLVDAGSCLLESLRNTAPQQL-AARVGDYNENLFYEMQDNDKDISGI--------IDGVEHDDQ-QLQEDIDAFESSICSSLQHTN--LTYRGSFMRTESTIYQPAHVDYDYPILEQYGTKLFLAFFPLTKEGAYLQLWQEPSKEENDGGGDEPIEGTVVFIPYGKMLIMPSDTIHGGGFKRGSSGNLRFHLYIA 262
BLAST of mRNA_H-akashiwo_Contig809.7.1 vs. uniprot
Match: A0A1Z5KM92_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KM92_FISSO) HSP 1 Score: 161 bits (408), Expect = 4.510e-44 Identity = 102/278 (36.69%), Postives = 146/278 (52.52%), Query Frame = 1 Query: 37 LRTSIIVMDPCSTRAQRLLETFDGKLCDVSSVLIEEMRDDKPMDLGAAKVGDFNENLSYAMQDGRGLLSVIQQARMNQGMEGAVHESSPHLLQEVARFEAALQEAVGDSSGIIEYQGSFMKTDTTIPQPPHVDFKWELLQEEKDRFFIAFFPLTDEGMFLQLWPNRCKTETTSGFIVYIPQGKLLMVPSDTVHGGGFKA---------------------------GEN---GNLRFHLYVASGGASLPITHTNKYTEEDDPTKEMSDRLIDSSCLKE 780 +R+ +I+ D R +++L ++GK+ V L EE+ P D A V DFN+NLSY MQ RG + ++ E E+A FE ++E + S IE Q SF+KTD T+ QP HVD+ W++L E D ++AFFPLT +GM LQLWP + G +V+IP GK+L+VPSDT+HGGGF+ EN GN+R+HLY+A+ G SLP N YT + D +E+S ++S + E Sbjct: 78 IRSIVILDDSIDDRVEQVLAEYNGKIVVVRRNLTEELYRLSP-DRFHAHVADFNDNLSYCMQTTRGFPANPSMLTADEWEE------------EIALFEKDVKEKL--KSCHIEVQSSFLKTDKTVAQPAHVDYSWKVLSERADELWLAFFPLTSQGMILQLWPPH----GSQGLLVFIPLGKMLLVPSDTIHGGGFRTFPIHDLGTRDESYESESANHTHNDECDKENVYVGNMRYHLYIATHGKSLPKFAQNVYTIKGDKRRELSQVCTNASGVNE 336
BLAST of mRNA_H-akashiwo_Contig809.7.1 vs. uniprot
Match: A0A1Z5KMN6_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KMN6_FISSO) HSP 1 Score: 159 bits (403), Expect = 2.100e-43 Identity = 98/266 (36.84%), Postives = 144/266 (54.14%), Query Frame = 1 Query: 37 LRTSIIVMDPCSTRAQRLLETFDGKLCDVSSVLIEEMRDDKPMDLGAAKVGDFNENLSYAMQDGRGLLSVIQQARMNQGMEGAVHESSPHLL------QEVARFEAALQEAVGDSSGIIEYQGSFMKTDTTIPQPPHVDFKWELLQEEKDRFFIAFFPLTDEGMFLQLWPNRCKTETTSGFIVYIPQGKLLMVPSDTVHGGGF------KAGENG-----------------NLRFHLYVASGGASLPITHTNKYTEEDDPTKEMS 747 +R+ +I+ + R +++L ++G++ DV L +E+ P A V DFN+NLSY MQ RG ++P +L QE+ARFE A++E + S I+ Q SF++T T+ QP HVD+ W++L E D ++AFFPLT +GM LQLWP + G +V+IP GK+L+VPSDT+HGGGF K G +G N+R+HLY+A+ G SLP N YT + D +E+S Sbjct: 78 IRSIVILDEEIDDRVEQVLADYNGEVLDVRRNLTDELYRLSPARFHA-HVADFNDNLSYCMQTTRGF------------------PANPKMLTADEWEQEIARFEKAVKEKL--DSCHIQVQSSFLRTVKTVAQPAHVDYSWKVLSERADELWLAFFPLTTQGMILQLWPPH----RSQGLLVFIPLGKMLLVPSDTIHGGGFRTFSIQKQGSHGAQITQTDECDKENVYVGNMRYHLYIATHGKSLPKFAQNVYTVKGDKRRELS 318 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig809.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig809.7.1 >prot_H-akashiwo_Contig809.7.1 ID=prot_H-akashiwo_Contig809.7.1|Name=mRNA_H-akashiwo_Contig809.7.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=270bp HSRSELRHFYDQLRTSIIVMDPCSTRAQRLLETFDGKLCDVSSVLIEEMRback to top mRNA from alignment at H-akashiwo_Contig809:319183..319992- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig809.7.1 ID=mRNA_H-akashiwo_Contig809.7.1|Name=mRNA_H-akashiwo_Contig809.7.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=810bp|location=Sequence derived from alignment at H-akashiwo_Contig809:319183..319992- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig809:319183..319992- >mRNA_H-akashiwo_Contig809.7.1 ID=mRNA_H-akashiwo_Contig809.7.1|Name=mRNA_H-akashiwo_Contig809.7.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=810bp|location=Sequence derived from alignment at H-akashiwo_Contig809:319183..319992- (Heterosigma akashiwo CCMP452)back to top |