mRNA_H-akashiwo_Contig804.5.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig804.5.1 vs. uniprot
Match: A0A7S3Y431_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y431_HETAK) HSP 1 Score: 363 bits (933), Expect = 1.360e-123 Identity = 183/192 (95.31%), Postives = 187/192 (97.40%), Query Frame = 1 Query: 1 TYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSNSGLGVFVGGSLIVHKSKL*HITTLSSAEAELVTLVLAICEAKWVCSMLWELVRVRGPVRAYTDCMAVVHMANHQKHLQRTQHLNIKRHFLKDEVSENRLSVEHTPGKF 576 TYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRS SGLGVFVGGSLIVHKSKL HITTLS+AEAELV LVLAICEAKWVCSMLWEL+RVRG VRAYTDCMAVVHMANHQKHLQRT+HLNIKRHFLKDEVSE+RLSVEH PGKF Sbjct: 189 TYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANHQKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGKF 380
BLAST of mRNA_H-akashiwo_Contig804.5.1 vs. uniprot
Match: A0A7S4DC66_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DC66_HETAK) HSP 1 Score: 363 bits (933), Expect = 6.450e-121 Identity = 183/192 (95.31%), Postives = 187/192 (97.40%), Query Frame = 1 Query: 1 TYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSNSGLGVFVGGSLIVHKSKL*HITTLSSAEAELVTLVLAICEAKWVCSMLWELVRVRGPVRAYTDCMAVVHMANHQKHLQRTQHLNIKRHFLKDEVSENRLSVEHTPGKF 576 TYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRS SGLGVFVGGSLIVHKSKL HITTLS+AEAELV LVLAICEAKWVCSMLWEL+RVRG VRAYTDCMAVVHMANHQKHLQRT+HLNIKRHFLKDEVSE+RLSVEH PGKF Sbjct: 386 TYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANHQKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGKF 577
BLAST of mRNA_H-akashiwo_Contig804.5.1 vs. uniprot
Match: A0A7S3Y454_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y454_HETAK) HSP 1 Score: 363 bits (933), Expect = 7.750e-119 Identity = 183/192 (95.31%), Postives = 187/192 (97.40%), Query Frame = 1 Query: 1 TYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSNSGLGVFVGGSLIVHKSKL*HITTLSSAEAELVTLVLAICEAKWVCSMLWELVRVRGPVRAYTDCMAVVHMANHQKHLQRTQHLNIKRHFLKDEVSENRLSVEHTPGKF 576 TYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRS SGLGVFVGGSLIVHKSKL HITTLS+AEAELV LVLAICEAKWVCSMLWEL+RVRG VRAYTDCMAVVHMANHQKHLQRT+HLNIKRHFLKDEVSE+RLSVEH PGKF Sbjct: 562 TYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANHQKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGKF 753
BLAST of mRNA_H-akashiwo_Contig804.5.1 vs. uniprot
Match: A0A6V1VJZ2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VJZ2_HETAK) HSP 1 Score: 345 bits (885), Expect = 7.190e-112 Identity = 166/216 (76.85%), Postives = 189/216 (87.50%), Query Frame = 1 Query: 4 YQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSNSGLGVFVGGSLIVHKSKL*HITTLSSAEAELVTLVLAICEAKWVCSMLWELVRVRGPVRAYTDCMAVVHMANHQKHLQRTQHLNIKRHFLKDEVSENRLSVEHTPGKFNFTDVFTKPLNGVLLERNMEMLNVC 651 YQ+LVGAF F++EFRPDI+F+VGKLS+FL PN DHMDAALYLAGYLRRT KGMVFGG+RDY +R++SDSDHGNCPD+GRS SG+ VF G SLI+HKSKL HITTL + EAELV LVL+ICEA+WV +MLW+LV R ++AYTDCMAVVHMANHQK LQRT+HLNIKRHFL DEVSE RLSVEH PGK+NFTDVFTKP N VL ERN+EMLNVC Sbjct: 519 YQALVGAFMFVKEFRPDINFSVGKLSRFLACPNADHMDAALYLAGYLRRTPGKGMVFGGSRDYRIRIISDSDHGNCPDSGRSTSGIAVFAGDSLIIHKSKLQHITTLGAPEAELVALVLSICEARWVRAMLWQLVGARDRMQAYTDCMAVVHMANHQKGLQRTRHLNIKRHFLHDEVSEERLSVEHIPGKYNFTDVFTKPQNRVLFERNVEMLNVC 734
BLAST of mRNA_H-akashiwo_Contig804.5.1 vs. uniprot
Match: A0A6V1TGB8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TGB8_HETAK) HSP 1 Score: 275 bits (704), Expect = 1.020e-86 Identity = 143/217 (65.90%), Postives = 164/217 (75.58%), Query Frame = 1 Query: 4 YQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGG--ARDYTVRVVSDSDHGNCPDTGRSNSGLGVFVGGSLIVHKSKL*HITTLSSAEAELVTLVLAICEAKWVCSMLWELVRVRGPVRAYTDCMAVVHMANHQKHLQRTQHLNIKRHFLKDEVSENRLSVEHTPGKFNFTDVFTKPLNGVLLERNMEMLNV 648 YQ LVG QFIREFR D +FAVG+LS++L PN DH +AA YLAGYLRRTA GMVFGG Y +R+V+DSDHG CPDT RS SG+ V++G SLI+HKSKL H+ TLSSAEAELV L+LA+CEAKWV ML L R R + AYTD MAVV MAN Q+HLQRT+HLNIKRHFLKDEV+E RLSV H GK N D+FTKPL V ER E L + Sbjct: 342 YQKLVGGLQFIREFRADTAFAVGRLSRYLSCPNKDHQEAAEYLAGYLRRTADMGMVFGGRGGNPYEIRIVTDSDHGMCPDTARSTSGVSVYIGHSLIIHKSKLQHLVTLSSAEAELVALILAVCEAKWVRGMLTALTRRRPHMTAYTDSMAVVQMANQQQHLQRTRHLNIKRHFLKDEVAEGRLSVRHVRGKENTADIFTKPLARVHFERLREALGI 558
BLAST of mRNA_H-akashiwo_Contig804.5.1 vs. uniprot
Match: UPI001C272154 (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C272154) HSP 1 Score: 142 bits (359), Expect = 3.100e-37 Identity = 77/202 (38.12%), Postives = 118/202 (58.42%), Query Frame = 1 Query: 4 YQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSNSGLGVFVGGSLIVHKSKL*HITTLSSAEAELVTLVLAICEAKWVCSMLWEL-VRVRGPVRAYTDCMAVVHMANHQKHLQRTQHLNIKRHFLKDEVSENRLSVEHTPGKFNFTDVFTKPL 606 Y+ L+G ++ RPDI+FAV KLS FL P DH+ AA + YL+ T G+ + G D ++ + SD+D CPDT RS SG +F+G SLI KSK H + SSAE E +++ LA CE W+ ++L + + ++ P+ Y D A VH++++ +RT+H+ I H ++D++ E + H D+FTKPL Sbjct: 160 YRRLIGRLVYLCITRPDITFAVNKLSPFLSKPCSDHLFAAERVLKYLKGTVGHGLFYSGQADLSLSIFSDADWAGCPDTRRSISGFCLFLGTSLISWKSKKQHTVSRSSAEDEYMSMALACCEVVWIIALLKDFGINMQQPIPLYCDSQAAVHISSNPVFHERTKHIEIDCHTVRDKILEGVIKTVHVHNNNQLADIFTKPL 361
BLAST of mRNA_H-akashiwo_Contig804.5.1 vs. uniprot
Match: A0A834D1Z6_JUGRE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Juglans regia TaxID=51240 RepID=A0A834D1Z6_JUGRE) HSP 1 Score: 139 bits (349), Expect = 1.870e-35 Identity = 75/216 (34.72%), Postives = 121/216 (56.02%), Query Frame = 1 Query: 4 YQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSNSGLGVFVGGSLIVHKSKL*HITTLSSAEAELVTLVLAICEAKWVCSMLWELVRVRG-PVRAYTDCMAVVHMANHQKHLQRTQHLNIKRHFLKDEVSENRLSVEHTPGKFNFTDVFTKPLNGVLLERNMEMLNV 648 Y+ L+G ++ RPDI+FAV LS+FL SP + H+ AA+ + YL+ +G+ F + V+ SDSD +CPDT RS SG +F+G SL+ KSK H + SSAEAE ++ +CE W+ ++L +L + P + D A +H+A + + +RT+H+ I H +++++ E ++ H D+ TKPL E + +NV Sbjct: 201 YRRLIGRLLYLTHTRPDITFAVHHLSQFLDSPRMPHLQAAMRILRYLKSAPGQGLFFSASSKVHVKAFSDSDWASCPDTRRSISGYCIFIGDSLVSWKSKKQHTISRSSAEAEYRSMAFTVCEIVWIKALLADLHQQHTQPALLFCDNQAALHIAANPVYHERTKHIEIDCHLVREKLQEGLITTLHVSSAHQVADIMTKPLGSKSFEVLLSKMNV 416
BLAST of mRNA_H-akashiwo_Contig804.5.1 vs. uniprot
Match: A0A833TF88_JUGRE (Uncharacterized protein (Fragment) n=1 Tax=Juglans regia TaxID=51240 RepID=A0A833TF88_JUGRE) HSP 1 Score: 137 bits (345), Expect = 5.920e-35 Identity = 74/202 (36.63%), Postives = 117/202 (57.92%), Query Frame = 1 Query: 4 YQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSNSGLGVFVGGSLIVHKSKL*HITTLSSAEAELVTLVLAICEAKWVCSMLWELVRVRG-PVRAYTDCMAVVHMANHQKHLQRTQHLNIKRHFLKDEVSENRLSVEHTPGKFNFTDVFTKPL 606 Y+ L+G ++ RPDI+FAV LS+FL +P H+ AA+ + YL+ T +G+ F + + ++ SDSD +CPDT RS SG VF+G SLI KSK H + SSAEAE + +CE W+ ++L +L + P + D A +H+A + + +RT+H+ + H +++++ E L+V H D+ TKPL Sbjct: 162 YRRLIGRLIYLTHTRPDITFAVHHLSQFLDTPRTPHLQAAMRILRYLKSTPGQGLFFSSSSNIHIKAFSDSDWASCPDTRRSVSGYCVFIGDSLISWKSKKQHTVSRSSAEAEYRLMAFTVCEITWIRALLNDLHQSHSQPAVLFCDNQAALHIAANPVYHERTKHIELDCHLVREKIQEGSLTVLHVSSVHQVADLMTKPL 363
BLAST of mRNA_H-akashiwo_Contig804.5.1 vs. uniprot
Match: UPI000B8C943D (uncharacterized protein LOC110818467 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8C943D) HSP 1 Score: 134 bits (336), Expect = 2.340e-34 Identity = 70/206 (33.98%), Postives = 119/206 (57.77%), Query Frame = 1 Query: 1 TYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSNSGLGVFVGGSLIVHKSKL*HITTLSSAEAELVTLVLAICEAKWVCSMLWEL-VRVRGPVRAYTDCMAVVHMANHQKHLQRTQHLNIKRHFLKDEVSENRLSVEHTPGKFNFTDVFTKPLNGV 615 +Y+ L+G ++ RPDI ++V +LS+FL +P H+ AAL + Y++RT +G+ F + ++ SD+D CPDT RS +G VF+G SLI KSK + + SSAEAE ++ CE W+ +L +L V+ +GP Y D A +H+A++ + +R +H+ HF+++++ + + H + D+ TK L+ V Sbjct: 102 SYRRLIGKLLYLIISRPDICYSVNRLSQFLAAPRTSHLQAALRILQYIKRTPGQGLFFPSSSAIQIKAFSDADWATCPDTRRSITGFCVFLGSSLISWKSKKQQVVSRSSAEAEYRSMANTTCEIVWILKLLRDLKVQHQGPALLYCDNQAALHIASNPMYHERIKHIEFDCHFVREKIQDGTVKTMHISTRNQLADIITKVLHPV 307
BLAST of mRNA_H-akashiwo_Contig804.5.1 vs. uniprot
Match: A0A836DGX9_9ROSI (Mitochondrial protein n=1 Tax=Salix suchowensis TaxID=1278906 RepID=A0A836DGX9_9ROSI) HSP 1 Score: 133 bits (335), Expect = 2.540e-34 Identity = 72/216 (33.33%), Postives = 120/216 (55.56%), Query Frame = 1 Query: 1 TYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSNSGLGVFVGGSLIVHKSKL*HITTLSSAEAELVTLVLAICEAKWVCSMLWELVRVRGPVRAYTDCMAVVHMANHQKHLQRTQHLNIKRHFLKDEVSENRLSVEHTPGKFNFTDVFTKPLNGVLLERNMEMLNV 648 +Y+ LVG ++ RPDI+++V LS+F+ P + H DAAL + YL++ G+++ +R D++ NCP T RS +G VF+G SLI K++ T+ SSAEAE ++ A CE W+ S+ EL P+ Y D A +H+A + + +RT+H+ I H +++++ ++ + P +F D+FTK L G + LN+ Sbjct: 91 SYRRLVGRLIYLTITRPDITYSVNILSQFMHEPRIPHWDAALRVVKYLKKNPGNGLLYSSNSPLQLRAYCDANWANCPMTRRSTTGFCVFLGDSLISWKTRKQKTTSRSSAEAEYRSMAAATCELTWLRSLFEELQVHFKPIELYCDNQAALHIAANPVYHERTKHIEIDCHVVREKIQAGKIVTKFIPSQFQLADIFTKALGGDNFKNLTSKLNI 306 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig804.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig804.5.1 >prot_H-akashiwo_Contig804.5.1 ID=prot_H-akashiwo_Contig804.5.1|Name=mRNA_H-akashiwo_Contig804.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=88bp MLWELVRVRGPVRAYTDCMAVVHMANHQKHLQRTQHLNIKRHFLKDEVSEback to top mRNA from alignment at H-akashiwo_Contig804:128558..129211- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig804.5.1 ID=mRNA_H-akashiwo_Contig804.5.1|Name=mRNA_H-akashiwo_Contig804.5.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=654bp|location=Sequence derived from alignment at H-akashiwo_Contig804:128558..129211- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig804:128558..129211- >mRNA_H-akashiwo_Contig804.5.1 ID=mRNA_H-akashiwo_Contig804.5.1|Name=mRNA_H-akashiwo_Contig804.5.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=264bp|location=Sequence derived from alignment at H-akashiwo_Contig804:128558..129211- (Heterosigma akashiwo CCMP452)back to top |