mRNA_H-akashiwo_Contig804.10.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig804.10.1
Unique NamemRNA_H-akashiwo_Contig804.10.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
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BLAST of mRNA_H-akashiwo_Contig804.10.1 vs. uniprot
Match: A0A7S2VYL2_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VYL2_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.130e-9
Identity = 23/39 (58.97%), Postives = 31/39 (79.49%), Query Frame = 1 
Query:    1 GMVRVPNRHNDAILDLKSVDLPTKMIISCSRDGIVKLWK 117
            G+VR  N H DA+LDLK +D P K ++SCSRDG++KLW+
Sbjct:  215 GLVRPENHHKDAVLDLKKIDSPIKGLLSCSRDGVIKLWR 253
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BLAST of mRNA_H-akashiwo_Contig804.10.1 vs. uniprot
Match: A0A7S1YUM8_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YUM8_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.690e-8
Identity = 23/39 (58.97%), Postives = 29/39 (74.36%), Query Frame = 1 
Query:    1 GMVRVPNRHNDAILDLKSVDLPTKMIISCSRDGIVKLWK 117
            G +R  N H DAILDLK VD P   ++SCSRDG++KLW+
Sbjct: 1348 GAMRPENHHRDAILDLKKVDFPMNGLLSCSRDGVIKLWR 1386
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BLAST of mRNA_H-akashiwo_Contig804.10.1 vs. uniprot
Match: A0A7S1CYZ9_CYCTE (Non-specific serine/threonine protein kinase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CYZ9_CYCTE)

HSP 1 Score: 58.2 bits (139), Expect = 1.700e-8
Identity = 23/39 (58.97%), Postives = 30/39 (76.92%), Query Frame = 1 
Query:    1 GMVRVPNRHNDAILDLKSVDLPTKMIISCSRDGIVKLWK 117
            GM+R  NRH D+I DLK +  PT+ +ISCSRDG +KLW+
Sbjct:  229 GMIRAENRHRDSIQDLKLIQGPTQALISCSRDGSIKLWR 267
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BLAST of mRNA_H-akashiwo_Contig804.10.1 vs. uniprot
Match: A0A7S2WQI5_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WQI5_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 1.490e-7
Identity = 25/39 (64.10%), Postives = 29/39 (74.36%), Query Frame = 1 
Query:    1 GMVRVPNRHNDAILDLKSVDLPTKMIISCSRDGIVKLWK 117
            G+      H DAILDLKSVDLP KM++S SRDG+VK WK
Sbjct:  466 GLQPPTTAHMDAILDLKSVDLPIKMMLSSSRDGVVKCWK 504
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BLAST of mRNA_H-akashiwo_Contig804.10.1 vs. uniprot
Match: A0A7S3JYX0_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JYX0_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 1.520e-7
Identity = 20/39 (51.28%), Postives = 30/39 (76.92%), Query Frame = 1 
Query:    1 GMVRVPNRHNDAILDLKSVDLPTKMIISCSRDGIVKLWK 117
            G +  P  H DAILDLK++D P ++++SCSRDG++K W+
Sbjct: 1669 GPLAPPTAHRDAILDLKAIDYPLRIMLSCSRDGVIKAWR 1707
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BLAST of mRNA_H-akashiwo_Contig804.10.1 vs. uniprot
Match: A0A8J2WZP6_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZP6_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 5.240e-7
Identity = 21/31 (67.74%), Postives = 27/31 (87.10%), Query Frame = 1 
Query:   25 HNDAILDLKSVDLPTKMIISCSRDGIVKLWK 117
            H DA+LDLKSVDLP K+++S SRDG+VK W+
Sbjct:  608 HRDAVLDLKSVDLPAKLMLSASRDGVVKCWR 638
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BLAST of mRNA_H-akashiwo_Contig804.10.1 vs. uniprot
Match: D8LRQ5_ECTSI (Non-specific serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRQ5_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 5.300e-7
Identity = 22/39 (56.41%), Postives = 31/39 (79.49%), Query Frame = 1 
Query:    1 GMVRVPNRHNDAILDLKSVDLPTKMIISCSRDGIVKLWK 117
            G+V   + H+DA+LD+K  +LPTKM++S SRDG VK+WK
Sbjct: 1422 GLVAPRSSHDDAVLDVKVTELPTKMLLSGSRDGAVKIWK 1460
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BLAST of mRNA_H-akashiwo_Contig804.10.1 vs. uniprot
Match: A0A835YVX7_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVX7_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 7.070e-7
Identity = 20/39 (51.28%), Postives = 28/39 (71.79%), Query Frame = 1 
Query:    1 GMVRVPNRHNDAILDLKSVDLPTKMIISCSRDGIVKLWK 117
            G+   P  H DAILDLK  D+P K+++S SRDG+V +W+
Sbjct:  378 GVTAAPTAHEDAILDLKCTDMPLKLLLSSSRDGVVNVWR 416
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BLAST of mRNA_H-akashiwo_Contig804.10.1 vs. uniprot
Match: W7TIJ6_9STRA (Non-specific serine/threonine protein kinase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIJ6_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 1.830e-6
Identity = 20/39 (51.28%), Postives = 29/39 (74.36%), Query Frame = 1 
Query:    1 GMVRVPNRHNDAILDLKSVDLPTKMIISCSRDGIVKLWK 117
            G V  P  H  AI+DLK+VD+P ++++SCSRD  VK+W+
Sbjct:  105 GPVPPPTCHTGAIMDLKTVDVPVRLLLSCSRDETVKVWR 143
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BLAST of mRNA_H-akashiwo_Contig804.10.1 vs. uniprot
Match: A0A7S1BKV4_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BKV4_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 2.540e-6
Identity = 20/31 (64.52%), Postives = 26/31 (83.87%), Query Frame = 1 
Query:   25 HNDAILDLKSVDLPTKMIISCSRDGIVKLWK 117
            H D ILDLKSVD P K ++SCSR+G++KLW+
Sbjct: 1685 HRDTILDLKSVDYPMKGLLSCSRNGVIKLWR 1715
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig804.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A7S2VYL2_9STRA1.130e-958.97Non-specific serine/threonine protein kinase n=1 T... [more]
A0A7S1YUM8_9STRA1.690e-858.97Non-specific serine/threonine protein kinase n=1 T... [more]
A0A7S1CYZ9_CYCTE1.700e-858.97Non-specific serine/threonine protein kinase n=1 T... [more]
A0A7S2WQI5_9STRA1.490e-764.10Non-specific serine/threonine protein kinase n=1 T... [more]
A0A7S3JYX0_9STRA1.520e-751.28Non-specific serine/threonine protein kinase n=1 T... [more]
A0A8J2WZP6_9STRA5.240e-767.74Non-specific serine/threonine protein kinase n=1 T... [more]
D8LRQ5_ECTSI5.300e-756.41Non-specific serine/threonine protein kinase n=1 T... [more]
A0A835YVX7_9STRA7.070e-751.28Non-specific serine/threonine protein kinase n=1 T... [more]
W7TIJ6_9STRA1.830e-651.28Non-specific serine/threonine protein kinase n=2 T... [more]
A0A7S1BKV4_9STRA2.540e-664.52Non-specific serine/threonine protein kinase n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig804contigH-akashiwo_Contig804:500752..500936 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LRQ5
PFAMsHEAT,Pkinase,WD40
Model size185
Max annot lvl2759|Eukaryota
KEGG koko:K08333
KEGG Pathwayko04136,ko04138,ko04140,ko04371,map04136,map04138,map04140,map04371
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0005737,GO:0005768,GO:0005770,GO:0005942,GO:0006464,GO:0006468,GO:0006605,GO:0006623,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006886,GO:0006914,GO:0007034,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016192,GO:0016236,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0019898,GO:0030242,GO:0031410,GO:0031967,GO:0031975,GO:0031982,GO:0032507,GO:0032991,GO:0033036,GO:0033365,GO:0034067,GO:0034271,GO:0034272,GO:0034613,GO:0035032,GO:0036211,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044232,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045053,GO:0045184,GO:0045185,GO:0045324,GO:0046907,GO:0051179,GO:0051234,GO:0051235,GO:0051641,GO:0051649,GO:0051651,GO:0061695,GO:0061919,GO:0065007,GO:0065008,GO:0070727,GO:0071561,GO:0071702,GO:0071704,GO:0071705,GO:0072594,GO:0072665,GO:0072666,GO:0097708,GO:0098796,GO:0140096,GO:1901564,GO:1902494,GO:1990234
Exons1
Evalue7.77e-07
EggNOG OGsKOG1240@1|root,KOG1240@2759|Eukaryota
EC2.7.11.1
Descriptionautophagy of peroxisome
Cds size120
COG categoryS
BRITEko00000,ko00001,ko01000,ko01001,ko04131
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387991.0144823-UTR-H-akashiwo_Contig804:500751..5007541681387991.0144823-UTR-H-akashiwo_Contig804:500751..500754Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig804 500752..500754 +
1681387991.0389535-UTR-H-akashiwo_Contig804:500874..5009361681387991.0389535-UTR-H-akashiwo_Contig804:500874..500936Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig804 500875..500936 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387991.0277486-CDS-H-akashiwo_Contig804:500754..5008741681387991.0277486-CDS-H-akashiwo_Contig804:500754..500874Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig804 500755..500874 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig804.10.1prot_H-akashiwo_Contig804.10.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig804 500755..500874 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig804.10.1

>prot_H-akashiwo_Contig804.10.1 ID=prot_H-akashiwo_Contig804.10.1|Name=mRNA_H-akashiwo_Contig804.10.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=40bp
MVRVPNRHNDAILDLKSVDLPTKMIISCSRDGIVKLWKK*
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mRNA from alignment at H-akashiwo_Contig804:500752..500936+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig804.10.1 ID=mRNA_H-akashiwo_Contig804.10.1|Name=mRNA_H-akashiwo_Contig804.10.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=185bp|location=Sequence derived from alignment at H-akashiwo_Contig804:500752..500936+ (Heterosigma akashiwo CCMP452)
GGTATGGTTCGGGTTCCTAATCGCCATAATGATGCTATCCTGGATCTTAA
AAGTGTTGATTTGCCAACGAAGATGATTATTTCTTGCAGCAGGGATGGAA
TTGTTAAGCTTTGGAAAAAATAATAATAATATATACTGTATGTATCTTTT
CCAAAACAACAACAAGTATTCAAAAGTGTTACGGT
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Coding sequence (CDS) from alignment at H-akashiwo_Contig804:500752..500936+

>mRNA_H-akashiwo_Contig804.10.1 ID=mRNA_H-akashiwo_Contig804.10.1|Name=mRNA_H-akashiwo_Contig804.10.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=120bp|location=Sequence derived from alignment at H-akashiwo_Contig804:500752..500936+ (Heterosigma akashiwo CCMP452)
ATGGTTCGGGTTCCTAATCGCCATAATGATGCTATCCTGGATCTTAAAAG
TGTTGATTTGCCAACGAAGATGATTATTTCTTGCAGCAGGGATGGAATTG
TTAAGCTTTGGAAAAAATAA
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