mRNA_H-akashiwo_Contig8.143.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig8.143.1 vs. uniprot
Match: A0A7S3UWF6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWF6_HETAK) HSP 1 Score: 167 bits (424), Expect = 2.110e-45 Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 1 Query: 1 MVSCWEASRLRNSPLPITIKGLSLQGASFGGSCLHETAPNAPEVTDVPPVSLAFIKNDEPEPYSKGEALAVPLYHSLNRE 240 MVSCWEASRLRNSPLPITIKGLSLQGASFGGSCLHETAPNAPEVTDVPPVSLAFIKNDEPEPYSKGEALAVPLYHSLNRE Sbjct: 852 MVSCWEASRLRNSPLPITIKGLSLQGASFGGSCLHETAPNAPEVTDVPPVSLAFIKNDEPEPYSKGEALAVPLYHSLNRE 931
BLAST of mRNA_H-akashiwo_Contig8.143.1 vs. uniprot
Match: A0A7S2XUI8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUI8_9STRA) HSP 1 Score: 135 bits (340), Expect = 2.610e-37 Identity = 62/106 (58.49%), Postives = 81/106 (76.42%), Query Frame = 1 Query: 1 MVSCWEASRLRNSPLPITIKGLSLQGASFGGSCLHETAPNAPEVTDVPPVSLAFIKNDEPEPYSKGEALAVPLYHSLNREKMLVEVSMPFDDEESKWVLAGTALFL 318 +VS W+ SRL ++ LP+T++GLSLQGASF G LHE NAPE+ VP V++AFI D+P PY +A+ PLY+S NREK+LVE+S+P DDE+ KWVLAG ALF+ Sbjct: 96 LVSSWDKSRLSDTHLPVTLEGLSLQGASFSGGYLHENNANAPELMLVPAVTVAFIAKDQPGPYGPNQAIEAPLYYSTNREKLLVEISLPIDDEQDKWVLAGVALFM 201
BLAST of mRNA_H-akashiwo_Contig8.143.1 vs. uniprot
Match: D8LN01_ECTSI (Dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN01_ECTSI) HSP 1 Score: 123 bits (309), Expect = 3.970e-30 Identity = 55/106 (51.89%), Postives = 76/106 (71.70%), Query Frame = 1 Query: 1 MVSCWEASRLRNSPLPITIKGLSLQGASFGGSCLHETAPNAPEVTDVPPVSLAFIKNDEPEPYSKGEALAVPLYHSLNREKMLVEVSMPFDDEESKWVLAGTALFL 318 +VS W+ RL+++PLP+TI+GL LQGA+F G LH+ +PN PEV VP V+LA+I D+ PY +A+ PLY SL+RE++L E+SMP + W+LAG ALFL Sbjct: 457 LVSSWDKGRLKSAPLPVTIEGLRLQGAAFSGGTLHQQSPNDPEVAGVPDVTLAYIHKDKQRPYQADQAIETPLYFSLDRERLLAEISMPTTEPRDVWILAGVALFL 562
BLAST of mRNA_H-akashiwo_Contig8.143.1 vs. uniprot
Match: A0A1W0A6P2_9STRA (Dynein heavy chain n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6P2_9STRA) HSP 1 Score: 106 bits (264), Expect = 8.680e-24 Identity = 48/108 (44.44%), Postives = 72/108 (66.67%), Query Frame = 1 Query: 1 MVSCWEASRLRNSPLPITIKGLSLQGASFGGSCLHETAPNAPEVTDVPPVSLAFIKNDEPEPYSKGEALAVPLYHSLNREKMLVEVSMPFDDEESKWVLAGTALFLGN 324 ++SCWE + S +I GL LQGASF G L E + + E+ VP +A+++++E EPY+K + VPLY+S++RE+MLVE+S+P + SKW++ G ALFLG Sbjct: 5416 LISCWEKDKTTGSIEWYSIGGLLLQGASFEGGVLQEPSSDGQELVAVPTCYIAYVRDEEREPYAKDACIKVPLYYSISRERMLVEISLPIAGDSSKWIIGGVALFLGE 5523
BLAST of mRNA_H-akashiwo_Contig8.143.1 vs. uniprot
Match: A0A8J5MA63_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5MA63_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 1.060e-20 Identity = 48/109 (44.04%), Postives = 67/109 (61.47%), Query Frame = 1 Query: 1 MVSCWEASRLRNSPLP-ITIKGLSLQGASFGGSCLHETAPNAPEVTDVPPVSLAFIKNDEPEPYSKGEALAVPLYHSLNREKMLVEVSMPFDDEESKWVLAGTALFLGN 324 ++SCWE RL + + + L LQGASF G L E +A E+ VP +AF++ D E Y K + PLY++ +RE+MLVE+SMP + ++WVLAG ALFLG Sbjct: 2541 LLSCWERERLSGTKVEWFELTRLLLQGASFEGGTLLEAVSDAQELVAVPSCYVAFVREDAQEMYEKENCIKTPLYYATDRERMLVEISMPISGDRARWVLAGVALFLGE 2649
BLAST of mRNA_H-akashiwo_Contig8.143.1 vs. uniprot
Match: A0A329S636_9STRA (Cytoplasmic dynein 2 heavy chain 1 n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S636_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 1.070e-20 Identity = 48/109 (44.04%), Postives = 67/109 (61.47%), Query Frame = 1 Query: 1 MVSCWEASRLRNSPLP-ITIKGLSLQGASFGGSCLHETAPNAPEVTDVPPVSLAFIKNDEPEPYSKGEALAVPLYHSLNREKMLVEVSMPFDDEESKWVLAGTALFLGN 324 ++SCWE RL + + + L LQGASF G L E +A E+ VP +AF++ D E Y K + PLY++ +RE+MLVE+SMP + ++WVLAG ALFLG Sbjct: 4268 LLSCWERERLSGTKVEWFELTRLLLQGASFEGGTLLEAVSDAQELVAVPSCYVAFVREDAQEMYEKENCIKTPLYYATDRERMLVEISMPISGDRARWVLAGVALFLGE 4376
BLAST of mRNA_H-akashiwo_Contig8.143.1 vs. uniprot
Match: A0A225WXS6_9STRA (Dynein heavy chain n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WXS6_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 1.990e-20 Identity = 48/109 (44.04%), Postives = 67/109 (61.47%), Query Frame = 1 Query: 1 MVSCWEASRLRNSPLP-ITIKGLSLQGASFGGSCLHETAPNAPEVTDVPPVSLAFIKNDEPEPYSKGEALAVPLYHSLNREKMLVEVSMPFDDEESKWVLAGTALFLGN 324 ++SCWE RL + + + L LQGASF G L E +A E+ VP +AF++ D E Y K + PLY++ +RE+MLVE+SMP + ++WVLAG ALFLG Sbjct: 3608 LLSCWERERLSGTKVEWFELTRLLLQGASFEGGTLLEAVSDAQELVAVPSCYVAFVREDAQEIYEKETCIKTPLYYATDRERMLVEISMPISGDRARWVLAGVALFLGE 3716
BLAST of mRNA_H-akashiwo_Contig8.143.1 vs. uniprot
Match: A0A662Y312_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y312_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 2.380e-20 Identity = 47/109 (43.12%), Postives = 67/109 (61.47%), Query Frame = 1 Query: 1 MVSCWEASRLRNSPLP-ITIKGLSLQGASFGGSCLHETAPNAPEVTDVPPVSLAFIKNDEPEPYSKGEALAVPLYHSLNREKMLVEVSMPFDDEESKWVLAGTALFLGN 324 ++SCWE R + + + L LQGASF G L E A +A E+ VPP +A+++ D E Y + L PLY++ +RE+MLVE+S+P + + WVLAG ALFLG Sbjct: 306 LISCWEKERCSGASVEWFELTRLLLQGASFEGGTLLEAASDAQELVVVPPCYVAYVREDAEEIYERDRCLQTPLYYATDRERMLVEISVPIAGDSAHWVLAGVALFLGE 414
BLAST of mRNA_H-akashiwo_Contig8.143.1 vs. uniprot
Match: A0A0P1AJ37_PLAHL (Dynein heavy chain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AJ37_PLAHL) HSP 1 Score: 96.3 bits (238), Expect = 2.720e-20 Identity = 47/109 (43.12%), Postives = 67/109 (61.47%), Query Frame = 1 Query: 1 MVSCWEASRLRNSPLP-ITIKGLSLQGASFGGSCLHETAPNAPEVTDVPPVSLAFIKNDEPEPYSKGEALAVPLYHSLNREKMLVEVSMPFDDEESKWVLAGTALFLGN 324 ++SCWE RL + + + L LQGASF G L E A +A E+ VP +AF++ D E Y K + PLY+ +RE+MLVE+S+P + ++W+LAG ALFLG Sbjct: 4262 LLSCWERERLSGTKVEWFELTRLLLQGASFEGGTLLEAASDAQELVTVPSCYIAFVREDAQEMYEKEHCIQTPLYYGTDRERMLVEISIPIAGDRARWILAGIALFLGE 4370
BLAST of mRNA_H-akashiwo_Contig8.143.1 vs. uniprot
Match: A0A0W8DAQ7_PHYNI (Catalase n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DAQ7_PHYNI) HSP 1 Score: 95.5 bits (236), Expect = 3.860e-20 Identity = 47/109 (43.12%), Postives = 67/109 (61.47%), Query Frame = 1 Query: 1 MVSCWEASRLRNSPLP-ITIKGLSLQGASFGGSCLHETAPNAPEVTDVPPVSLAFIKNDEPEPYSKGEALAVPLYHSLNREKMLVEVSMPFDDEESKWVLAGTALFLGN 324 ++SCWE RL + + + L LQGASF G L E +A E+ VP +AF++ D E Y K + PLY++ +RE+MLVE+S+P + ++WVLAG ALFLG Sbjct: 411 LLSCWERDRLSGTKVEWFELTRLLLQGASFEGGTLLEAVSDAQELVAVPSCYVAFVREDAQEMYEKENCIKTPLYYATDRERMLVEISVPIGGDRARWVLAGVALFLGE 519 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig8.143.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig8.143.1 >prot_H-akashiwo_Contig8.143.1 ID=prot_H-akashiwo_Contig8.143.1|Name=mRNA_H-akashiwo_Contig8.143.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=111bp MVSCWEASRLRNSPLPITIKGLSLQGASFGGSCLHETAPNAPEVTDVPPVback to top mRNA from alignment at H-akashiwo_Contig8:6688405..6689362+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig8.143.1 ID=mRNA_H-akashiwo_Contig8.143.1|Name=mRNA_H-akashiwo_Contig8.143.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=958bp|location=Sequence derived from alignment at H-akashiwo_Contig8:6688405..6689362+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig8:6688405..6689362+ >mRNA_H-akashiwo_Contig8.143.1 ID=mRNA_H-akashiwo_Contig8.143.1|Name=mRNA_H-akashiwo_Contig8.143.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=333bp|location=Sequence derived from alignment at H-akashiwo_Contig8:6688405..6689362+ (Heterosigma akashiwo CCMP452)back to top |