mRNA_H-akashiwo_Contig8.112.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig8.112.1
Unique NamemRNA_H-akashiwo_Contig8.112.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig8.112.1 vs. uniprot
Match: A0A7S3XSU3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSU3_HETAK)

HSP 1 Score: 312 bits (800), Expect = 3.230e-103
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 1
Query:    1 QQSGAWYEQHSVARSRVIQLGKEEEMNWPQQESGKSAPADPHDDYFVRRQDEFNQELASISDAVGSAEQYYSRHTWHKPEGETHHVDHWFNPMSRQRSRVEKWYTSHEHYIVNAALQSSEFVQNLASSGPASVIVARDEYDENRGEGYKT 450
            QQSGAWYEQHSVARSRVIQLGKEEEMNWPQQESGKSAPADPHDDYFVRRQDEFNQELASISDAVGSAEQYYSRHTWHKPEGETHHVDHWFNPMSRQRSRVEKWYTSHEHYIVNAALQSSEFVQNLASSGPASVIVARDEYDENRGEGYKT
Sbjct:  334 QQSGAWYEQHSVARSRVIQLGKEEEMNWPQQESGKSAPADPHDDYFVRRQDEFNQELASISDAVGSAEQYYSRHTWHKPEGETHHVDHWFNPMSRQRSRVEKWYTSHEHYIVNAALQSSEFVQNLASSGPASVIVARDEYDENRGEGYKT 483          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig8.112.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S3XSU3_HETAK3.230e-103100.00Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig8contigH-akashiwo_Contig8:5104417..5115693 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Model size453
Hectar predicted targeting categoryother localisation
Exons4
Cds size453
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387981.720816-CDS-H-akashiwo_Contig8:5104416..51046031681387981.720816-CDS-H-akashiwo_Contig8:5104416..5104603Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig8 5104417..5104603 -
1681387981.730537-CDS-H-akashiwo_Contig8:5104958..51050591681387981.730537-CDS-H-akashiwo_Contig8:5104958..5105059Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig8 5104959..5105059 -
1681387981.7413116-CDS-H-akashiwo_Contig8:5113215..51133081681387981.7413116-CDS-H-akashiwo_Contig8:5113215..5113308Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig8 5113216..5113308 -
1681387981.7521794-CDS-H-akashiwo_Contig8:5115621..51156931681387981.7521794-CDS-H-akashiwo_Contig8:5115621..5115693Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig8 5115622..5115693 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig8.112.1prot_H-akashiwo_Contig8.112.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig8 5104417..5115693 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig8.112.1

>prot_H-akashiwo_Contig8.112.1 ID=prot_H-akashiwo_Contig8.112.1|Name=mRNA_H-akashiwo_Contig8.112.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=151bp
QQSGAWYEQHSVARSRVIQLGKEEEMNWPQQESGKSAPADPHDDYFVRRQ
DEFNQELASISDAVGSAEQYYSRHTWHKPEGETHHVDHWFNPMSRQRSRV
EKWYTSHEHYIVNAALQSSEFVQNLASSGPASVIVARDEYDENRGEGYKT
*
back to top

mRNA from alignment at H-akashiwo_Contig8:5104417..5115693-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig8.112.1 ID=mRNA_H-akashiwo_Contig8.112.1|Name=mRNA_H-akashiwo_Contig8.112.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=11277bp|location=Sequence derived from alignment at H-akashiwo_Contig8:5104417..5115693- (Heterosigma akashiwo CCMP452)
CAGCAATCAGGGGCTTGGTATGAGCAGCATTCAGTTGCTCGCAGTCGAGT AATTCAGCTTGGCAAAGAAGAGGTATATCTATTTAATAAGAAGTATTATT TTTGTTCTAAAGGGAAAAAATGCATTTTGCTCAGTTTTGGAGTGCTAGAT TTCATTTGGAAGTACATCTGCATTTTCAGAATATATATTTCTTGTATACA GTTCTACTGGCATGCCAGCAATTCTGCAAAGACAGGTGCTGCCTGTGTAT ATATGCAGGGGCGTGTAGCACTGGCCTGCGTTCATCTTTTTACCACACGG GCAACCTATGAAGTAATTTCGCAGGCAAAAATGTTGTTTCTAAGAAGAAA GGGGGGATTGTCTCGAATCGAAAAAATAAGGGTTTGGACTGTTCGGCTCT TCATTTGCTTTGTTTAGTGCTTGAAATGCTTAAACTGATGGACTTTTCTC AAGCGCTACTTTTCATTTGTACTACGATACAAAAAATGATACAAGGAAAT GATACAAGGCACCGATACTATACTCTCGCTCACTCAATTTATACAACTGG CAAACAATCTGGAGTTCTTTCTTTTTATATTCTAACCACATCTTGTTTTT TTCTTACTTTGTATTCTACGTCTCCATGTGCGCCCCCACAACCGGGTGTC AGGGTGGCCATTACGGCCCCGAAGGGCCAGATGGGAAGCGCCGGCTAGAT GGCCCAGGTGTTCAGTTCCGGACGGCGCCATTCCAAGCTTCTGACAGAGC TGCTCTTCCATATCCTCAGAATTTACTCATGTAGAACCAAAAAAAGAGCA ATGAGAATCTCTTCGGTGTGTTATGTATTTTTCTGTAAGTGCGTATAATT GTATTCCAACCACCAAAAAAGCAGTTTTGTTTCGTTTGTACTGGCTCTCG GAAATGTCAACATGCAGATTGTGGAATAGAGAACAAAAAAGAAACTGACG TCGTCCTACGTGGAACGGTTCGAATCATCATATCTTCCCGAACCTCTTCA TCTTCTCAAACCAAATGTTTACTGCTTCTTGTCGTCGCTTCTCAACCAGA AAGGCCAGCAGCACCAACAGCAGCCGTATCTAGAACTAACCGAGTTCTCT CAAATCTTCTTTGGAATTCTTGAAATATCATAGAACTTTTGGGAATTGTC AAACAGAAGGAATATCACATTAAAATACTTACTGCACATATTTACAGTCT GAACAGACAGATAGGCCATCAGTAAGTATTTTAATGTAATTTCAAGAAAG TCTGAATCCCTGAAACCAGTAACAATAGAAGGAATATCGTTGTGATTGAT AAAACATAGTGAAATTCTCGCCAAAGTTACACCATTTTGTCCAAGATTTC CTTCTGTACAATTTTTTCCTTCTTTTTCTTTCTTTCAAAATGCAAAGAGT AAAAGGTTTTGATAAAGTTTTAAAAAACTTCTTTAGAAAGTTCTACGATC AACAAGCCATTCCATTATAGGTCGATGGCTTTACCTTCTGTTGACATGGT GAATGCAATCTTCAGGCTCTGATTCTTTCATATATTGCTCATAGTAACAA AATATCCAACCCATGAAAGTTTTAGCCATTGAAGTGTGCTAAACCGTGTG AAACTGTGTGATGCGAGTTCGACCTGTTTTGGTCAAAACTTCGCAGGGAT GGTTTACAAGTAATACCGAGGCTTATTGGCCCGTTCTTTTGACAAGCATT AAGCCATATATACTAAGATCATCATTGATGGTCGATATGGAGTTTGTAAT ACCATTCACAGCTCCGCCCATTCCCATTTCCATTTGCCTTTGGTAGGCTT GATGTTGGCGAGCAAAGGGGGCGTCCCCTTTGGTCTCTGGGTGTTTCGTG CTATGTTGAGGTCTTCATGTCCTTGTTAGTAATGTCGTTACAGTTTGCGG TTGATGTATTTGAAAATTTTGTAGAAAAAGAACATTAACGCTTGAAGATT GAAAAATATTATTCCGACATGCGTCAAGTTTCTTTTGTTGATTGATATTT CACTTGCTTAATACCTTACCGGTGCAAACAGCTCGAGAGTTCAAAGACAC GAAGCAAAAATAAAGCTTCTATGAAAGTTTGAAATTACGGGATTCAAGTG GAACAGACCAAGAAAATTTGCTTGTATCATTTTTTTGTATCACGTCTATT GCCGATGAAAATCCTTCATAGGTTGCCCGTGTGTACCTGCATAAGTGCAA GTTGATGCAAGCAACTGGTCATTGTAGTACCTTGTTAGTCAACACTCATC ACATTCTTACCTCGTTATAATCAACACTCGCATTCTAAGACAAAGGCACT GAAAAAGAAATTGAGACTCCTCATATCAACAGCAGTGTGAATTATCTACT GTAACCATCTCAACTCCATTTAAAACTTGATGTAGGAAATGAACTGGCCA CAACAGGAAAGTGGTAAAAGTGCCCCGGCAGACCCACATGACGACTATTT CGTGCGCCGTCAAGACGAGTTCAACCAGGTCAGTCCAATTCTACCTTCCT TGCGAGCAGGGAGCCCACACCAAACCTTTAGATGAATACTAGGACTTGGT TACTTTTTGTTCTGTTTTTTGAAGGGGAAGACGGTTCTGAGTTTTTATAT CTAGCATTCATACTTATATAAGTTGCCAGAATTTGGCTACATGTACAATG ACAGTGAAGTGTGATACCGTGTAGTGGGGGGTGGCATTGTATTGTGTAAT GAATAAACGTAGATATATATAATAAGTATTTCATCTGGCATTGTTGTGCA CTTCAGTACTACTGCGATGGCACGCAATGGTTTTTGAAAATCACTCGCTG CATCATCCTTTTGATAATATAATGAACTATCTCAAGATTATGATGCATTG TGTCATTATGCTCCTTTAGGCCGCGAGCTGCCGTAGCGCAAGGCGTCCAA CTCGGATCTGAAAAAAAGGATACGTTCTTACAGCCGTTTATTATATATTA GATTCCGAAAATAAAATGCGAAGTGTAAATTTTGTCCCAGATCCGAGATA CGGGCCACCCTTGGGTAGGACGGATACCAAAACCCGCGCCAAAAATAAGA ATTTACTTTTCTAGCATTTTTTTTTCTGAAACTACACGCGAAACGGCTAT AAAAAAGCATCCGCTATTTTCGGATTCGAGTTGGACGCCTCGAGATAGCG CATGGCGCATGGATAAAATATGGTCCGAAACCGGTCATGACACAGCCCGG AAACTGAAATCGGGCCCTGAAAACCAGCGGATGTCCGAAACCTGAAAATC GGGCTTTTGTAGCATCTTCAAGATGCTTTAGGAATTTCAGAACTACTTTT ATTTTATAGTGAAAAAACTTCCTTGAAGAGATATGGCGCGCCAGCCTAAG TGAAATTTATCTTACAATGCATCATACTTGGATATTCCTACTGGCGTCTT TTTATATATAGTCTGAACAGGCAGACATGCAAGACTTTTGGAAGATGTTT GGGCATGTATTCCAAACGTTAGCCAAACTAGAAATTATGTTGTCCAGAGC TTTCACACTCTGCAGCACGAAGTGACTAGGGGGTGTACTCTCAATGATGT ATATTTCTGTATGCGGTAGGCTCGCACGAGATAGCAGTATTTGTTTTTTA GAAATAAAACATCTTTTAAAGTACAGGGGGAACCACTCACTGTGCCCGGT TCTGGTCCTTGGACAATAGAGAGGACACAGTGAGGGGGAGGACACTGTGA GGGGTCAGGGAGGTCCTTGGCAAGGTGTCCGCATGTCCGCCGTACGGGGC CAAGGGTTGACCGTGACGGGGCCAAGGGTTGACCGTGCGGGCCCGGAGAC TACCGTGCGGGCCTGGACACTAACACCGCGCGGGCCCGGAGACTACCGTG CGGACACCATCAGGGGTCCGGAGAGTCCGAGGCCCGGGGGCCGCATGTCC GCCAGGCGGCGGACATGCGGGCCCCGGGTCCGCCATGCGGGGCCGAGGGT CAAATCATTTGGTTCCAGGAATTCGAGAGGACACAATGAGGGAGAGGACA CAGTGAGGAGGGGACACAGTGAGGGATCCCCCCTGTATTAATTTATACAC TCGTTCACACCATGGAAAAAATAATTTATCAGGTATAAAAAACGATTTTA AATTGTTAAGCTTCTTTTTGAACGCACCAGGTAGTGACTCGCTTCAGCTC TGTTTTCGATAATATGTTAGCCAATTCTGAAAACATGTTCTAGAACAATT TAGGGAGAAAATATTCAGACGAACGATGCATCGTATCATAGAACTACTTC CTTCTTTCTTCACTCTTCTCTTTCTTCCTCATTTTGCAGGTATTATAGTA GAGGGCATGTACTACTTCAGTACATGGTTTCGGCCATGTAAGCAGGGTGG CAGTTGATGAGCAGACCATTTCATCGCTCATATTCACTATGTATAATTTA CGAACAAAATTGAATCCTGGTTGCCTTCTTGGAAGGGGAGAAGGGGACTT CTTGGAAGGTGACACCATATTTGAATGAGATGACTGCTTGGAAGAAGGGA ATGCCTGCTTGGAAAATTGACGACTTTATTTCGCTTCGGCTACTCCAGGA GACGATGGTCCGTTGGGGGTGATGAAATGAGCATTGCGGTAAAGAGATTT TTGATGATGAGCTTACCCTCTTTTTATTTATGGATGTTTGGTGTCTGTCA AAGCAAAATAAACAAAAGGTTTGAGATCACCATTTAACCCGTTTAGACAA ACTTTTTTGGGCAAGCTATATTGGCATATATATATACCGATATAGTTTCG CAATCGCGATTGGTCAAAGCGAAACCGCTGATATGCGTGCTGATCAGGAT TGGTGCTTCATTTTCCGTTACACCCTTGTTGGGCTATATTGGTATATACC AATATAGCGTTACACCCTTGTTGGGCTATATTGGTATATACCAATATAGC TCTCAATCGTGAGACTGAAGTGACCCTTTCAGTCCTATTTCTTGTGGTAG GAACAAGTACCAGTCCTACTATTCTTCTCGGATTCGTTGTGGACCCATTA CTTGCGAAAATGGAATTAAATTTGCCATCCTCCTCTTCTTCCGGAAAAAA CGTACGTGTGATGCTGTCGTTGAACCAATCAAAATCAAACGATTTGAAAA AAGATCACAAACCATGCGACCAACAAACACGGAGAACGGATATACAACAA GCAGATGAAGTACAATCTGCTACACCTAGCACCTAGCTACCATGTGCTGT ATCTATCAGATACCTCTCAGGACCTTCAACAAAAATCTTTATAAAGCAAA ACATTTTACCATTCCTGCCTGGAGCCAAGTAGAAACATGCATGGATAACT TTCCAGAGTCCCAAAAGTCAAAAATATAGTTCATTTTCACTAGTATACAC AGCCATTGAAACAGTACACCGCTGCACTCAGAATATATGGGCAAGGGAGC AGAGCAGCAGAGCTATCAAAGTGGTAAAAGCATCCAAAACGATCAAACAA TTATAGAAGTATGTCCGATAAAATAATTATGTGTCGGATGACGATTGTCT TTTTCATTAAGTTCTCGAATTCTATTGGCCTCTTTATCTTATTTAGAAAA TTTGAAATAATTGCAATTATTGGCTAGATTTTTTTTTTATGCTCCGTATT TTCATTGGAGAATCCGGCGTTGAGACTGGCGGTTGAGCCATATTGGTATA TACCAATATAGCTTTTTTCTTGTCTAAAAGTGTTAAGTTCTTTTTGTTTT ACTCCTCTATAGGATGTGTAAAGCAGTATTTGGGAAAGAAACAGCGGATT AATGAATGTCGCAGTTTTGACCCTTCTCATTGGTCAGGCTTTAATTCTTT AAGTGTCATAAAAAACGACGGTTTTCATACATTACCATCCCACAAAATTA GGTTTCCCATACACAATTCTGTACGGGGGGGAAATAAAATAATATGTAAT TAGAAAATATGTTTCCGGCTACTACCGATGGGTTATGGTCTAATAATATG TGATTACTTCTTCCCTTTTGTGGTGATCGCGGTATCTTTCGGACGACAGT GATTTCCAAAAACGCCCTTTTATTAGCCTGCAATTCGCAAAACGCTCCGT ATTTAAAAAATCCACAATCAGAAGAAAGCCCACCTCAAAAACCAGCTGTG ATCGTTGCAAAAACATGGCCATCGTGATGAAAAAGCAAGAAGGCGTTGTA GTTCTATCATAGAGGGCGAATAAAAAAAAATTTCAAAAAACGTATGTATG CTTTTTTATATATATATATGATTCCTTTCCATTGAGTATGAGCATAAATA TAATTCAACGAAGTGTTTATAGCTTAATATTCCGGGTCGTTTGATGACGA TCCTTTATGTTCATACTAATTGGAAAGTAATCATATAATAGATGATAATC CATCAGTAGCCGAAAGCATATTTTCTAATATGTATGCTTAAATAAATTTA AACTCTCATCATCACCATACGCGCAATATTTCGGGTCGTTTGGTGACGAC CCTTTATGCTCATACTCAATAGAAAGTAATCGTATATTAGACAATAATCC ATTAACTCCCACTCTTTTTTAGAATTACTAGAAGAATAATTTTTGGGAAA ACTAATATGAACATAGAGGTCCCGGTCTACGGACCGCAGGCCCACCTCTG CCCTCTATATGGGGCAGGGGGACAGTGTTTGGTTGACTACAATAGTCTCC TTTGCGCACAAACACGCAGATGCTGGGATGATGCTCAGAGGAGGGGGTGT CCTGCGTTGTAGTCCTGCGCACTGGAGCACTTGAGCCATCCAAGCGCCTG TTGTGGCAGGGTCCACATATGGAGGCCCGGGCTTCGGTCCTTGTAGTTAT CCAAGTGGTGGGCTTGAAATAAACTAAAATCATCGTCATCATCATCATCA TCAGTAGCCGAAAAAACATGTTTTCTAATATGTATGTATGTATGATGATG ATGATGATGTTTTATTTCAAGTCCACCGATTGGATAACTACAAGGACCTA AGCCCCGGCCTCCATATGTGGACCCTGCCACTTCTAGCTCCCACTGCTCA TTCCTTGGTCCATCACCAAAACTTCAGATAAGAATAAGAAAAGAAAAGAA AAGAAAGAAAAATACCATGCTGGTTCCAACTGCACACCTTTCCAGTGGCT ACTCCTCTCTTCATCCCTGGTCTTGCCCCTTTTTCCACCCGCAAATGGAG CAGTCACTCATAAAATCCGGTCCTCTCCAGGGGTGCTCGCGCCTTTGCTG TCCAAGCGAGCCGCACCAAGACACTGGGCACACCTTATATTTCCCTCTGA TGAGTCCCGCTGTCCCCCCCTTGCCCCTCCCAGGCTCCCTCCTCTCCCCT TCCCTCCCTCCTCCAGCCATCCTGCCTCCCCCCCCGCGCCCCTTCTGGGC CCCAGGTCTTTGCGCCCTTCCTTCAGCCTCCCTGGCCTGAGCTTCCTGGC GCTCTTTCGCCGCCCTGGCCCTAGTATGGGGATTGCGCTGGCTGGCCTCG GCCCACAGCTTTCGTTGGATCTCGCGGTCATGCTTTTCTTCCTCCTTCTC CTTCTCTGCAAGCTCCACTCTTTTCTTTTCCTCCTCCTTCTGCAATTCTC GCTTTGCCCGCCTCTTTTCTTCCCTCGTGCTAACCCGCGTAAACCCATCT TCCACTGCCTCTTGCAGCATATAGCTTTCCCTCCCCCCCAACACTGCGCC GACTGCCCTTGCTGAGTCGTCCTCGGAGCTCGATGCAGTCTCCTCATCAC TCGATTCAGAGTTTGTATCCCCACTCGACCCCTCAGGTGACTCCCCCTCA CCCTCGATGCCACTCTTGCTTCTCCCTCCAGGCTGATCGGTCTGCTCTCG CTGCAGCACCACCACAGCAGCACATTCGTACGCGTTCTCGATCAGTGTGT CGACGACGCAACGTTCATAGCATCTGTTCGTTTTTCTTCCCCTTCCCCTC CCTCCCCTCTGCTCCCCCCCGCCTGTTTGATTGGCGGACCGCTCCTCTCG CTTGCTCCCCGCTCCTTCGGATTTCTCCCCCCCTCCAAGTTTGTTCCGCC GAATTCTGAATTCGTAATTACAATACGCTGATTCCTGTTTAAGCGGGCAC AGAATTCTTCCTGATCTTTCCCCCCGTCTCCAGCAGATGTCCTACTACAT GATAAGGAGCAGCCGACGTGTCGTTGTCAGCAGCAGCAATGCTTGGTGGT GCTTGCTCCTGGCAACTCATCTTTTGCTCGACTTGATCAATTGGGCCACC TGCTTGAGCGCGCTCAGGCCTCCTGATGGAAGACTGGACTCTCTTCTTGG CTTTCTGCCGTCGAAGCCGCTCACGGGCTTGTTTCCCAAGGCGCTTTGCC CTCGCGCCTTTCCCTGTAAGGACTGGTCCTGGAATCGCTGTCGTATCAGC CACCAGGCCCGAGAAATCCTGATTGTATACCCTCCTCGCCCTTCTTTCAG CCGCGAAGTGCTTCCCTCTCACAGGCCCACTTGTGTGCCATCTCGAATCA CCCTCGCCGCAGACCGCGCCTACCAAGACTAGTCCGCTGCCCCAGCTGAT CCCCCACCCTGCCCTCCCTACTCCCACTCTCGAACAGGCCCTGGCCATGT GGGATTCCCCCTGAATCCCCCCAAAGCAACAGGCGTTTGGCTGTCTCATG TGCTCCAGTGCGCAGGACAGCAACGCAGGACCCCCCCTCAACTGAGAATT ACCCCAGCAACTGCGTGTTTGCGCGCAAAGGAGATTGCTGTAGTCAGCTA AACACTGTACCCCTGCCCCATATAGAGGGCAGAGGTGGGCCTGCGGTCCG CAGACCGGGACCTCTATGTTCATATTAGTTTTCCCAAAAATTGTTCTTCT AAATTCTAAAAAAGAGTGGGTGTATGCTTAAATAAATTAAGCAGATGCAT GCGGCTATCCCTGTTAGCCGCGCCTCCAGCCGAACGAGAATCGTCAAAGC TGATCAAAAATACAACCCACCTGAGCATTCGACTCCAGACAGCTTTACTG AAAAAAGCCGTGAACTTCATCGGTCCAGTTGAGGGACCTGACGCCAAACT GCCCAAGCCAACTTCTGAACTGGCAGCCCAACAGACGAGGGCCCCAGCAC TTGCAACGACAAAAGTGAACCTTCGGTAACTCACAAGAAAACAGGCCAGC AGAGCGAAAACACTGCGAGACCCGTAAAGATTAATCTCGAACAGTCGCCA GATGCCTGAACATTCGAGCTCCAACAATCATTCGTGCACAGCGCAGTCAA CGCAAGAAAGAAAAAATGGCAAATGACAACAGCAAAAGAAACATGATACT GGACTTATTTTTCCTGTTGAAAAAATTCAATGTAACATCCCTAACAGGCC CGATGAGCCTAAGAGTGGCAGCTCAACCACTACTCACTTCATCCAGCAAG TGGAGCTACAACACTGTTGTAGAGGAGAACTCCACAGTCGCGCCCATCCG ATGATCAAAGCAATTTCATCATCACTGAACCAGTAGACTCGAGTCAATCA TTCAGTACCAATCATCATATTAATCACTTACTAGTAGTTAGGTTATTGCA CGCTGATGTGCCCCAATAAGGGCGAAAGTCAGGCTGTGTTGCATATCTAC ACCACTGTGATAAATGGTTAAACTATTTTGGCTCCTATATCTGAATGATA GTTTACTGCCAGCAATGCATTATATTGTAACAAAAAAACTCTCTAATAAT CAAACTCGGTATCACGGGCAAGCTCGCCTGATATGCCGTTCAATAATCCA GGTATGTTAGTCCTCGAGGCATCATGCCACCCCGCTCTGCGTGCAGATGC ATGCGGCTATTTCTGTTAGCCGCGCCTCCAGCCGAACGAGAATCGTCAAA GCTGATCAAAAATACAACCCACCTGAGCATTCGACTCCAGACAGCTTCAC TGAAAAGAGCCGTAAACTTCATCGGTCCAGTTGAGGGACCTGACGCCAAA CTGTCCAAGCCAACTTCTGAACTGGCAGCCCAACGGACGAGGGCCCCAGC ACTTGCAACGACAAAAGTGAACCTTCGGTAACTCACAAGAAAACAGGCCA GCAGAGCGAAAACACTGCGAGACCCATAAAGATTAATCTCGAACAGACGC TAGATGCCTAAACATTCGAGCTCCAGCAATCATTCGCGCACAGCGCAGTC AACGCAAGAAAGAAAAAATGGCAAATGACAACAGCAAAAGAGACATGATA CTGGACTTATTTTTTCCTGTTGAAAAAATTCAATGTAACATCCCTAACAG GCCCGATGAGCCTAAGAGTGGCAGCTCAACCACTACTCACTTCATCCAGC AAGTGGAACTACAACACTGTTGTAGAGGAGAACTCCACGGTCGCGCCCAT CCGATGATCAAAGCAATTTCATCATCACTGAACCAGTAGACTCGAGTCAA TCATTCAGTACCAATCATCATATTAATCACTTACTGGTAGTTGGGTTATT GCACGCTGATGTGCCCCAATAAGGGCGAAAGTCAGGCTGTGTTGCATATC TACACCACTGTGATAAATGGTTAAAACATTTTGACTCCTATCTGAATGAT AGTTTACTGCCACCAATGCATTATATTGCAATAAAAAAACTCTCTAAAAT AATAATAATAATAATAACAAGACTCTCATCATCACCATAGGCGCATAGCA TCTGTTTGTCCTTATCAATAAAACTTATATACAGGAGCTTGCTTCGATCA GTGATGCCGTAGGGTCTGCAGAACAGTACTACAGTCGACACACGTGGCAC AAACCTGAGGGGGAGACACATCATGTTGATCACTGGTTAGTACTAATGTG GTGATTACATTGTTTTGAAAAAACACAGTTGACTGATTGAAATGAATGTG TGTCTTTTAAAATCACCCCACATGGACAAAACCTACTGACAGCCCTGATC CTACGCACGAATAACATCACCAGGAGTAAGCACCCTGTTTAGTGCCTACA AAGAAGCATTGTGCTGTAGCATATTTTGCAGGCTACCCTGGTGTAGAGAT CGAAGCTGCTCGTATTTTTAGCATCATCAGAAATGTGTAAAACAAAATGA TGCACCTTCATATCTAGCCCTGAGTTCCAGAAGCAAGAAGGGGGAGCAGT AAATGTTGCCAACCCCCCCCCCCCCTTTTTTTTTGTACAGGTTCAATCCC ATGAGCAGACAAAGAAGCAGGGTTGAAAAGTGGTACACCTCGCATGAACA CTACATAGTCAATGCTGCTCTACAAAGCTCAGAGTTTGTCCAGAACCTTG CTTCCTCTGGCCCAGCTTCAGTGATTGTTGCCAGAGATGAATATGATGAA AATAGAGGGGAAGGTTACAAAACATAA
back to top

Coding sequence (CDS) from alignment at H-akashiwo_Contig8:5104417..5115693-

>mRNA_H-akashiwo_Contig8.112.1 ID=mRNA_H-akashiwo_Contig8.112.1|Name=mRNA_H-akashiwo_Contig8.112.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=453bp|location=Sequence derived from alignment at H-akashiwo_Contig8:5104417..5115693- (Heterosigma akashiwo CCMP452)
CAGCAATCAGGGGCTTGGTATGAGCAGCATTCAGTTGCTCGCAGTCGAGT
AATTCAGCTTGGCAAAGAAGAGGAAATGAACTGGCCACAACAGGAAAGTG
GTAAAAGTGCCCCGGCAGACCCACATGACGACTATTTCGTGCGCCGTCAA
GACGAGTTCAACCAGGAGCTTGCTTCGATCAGTGATGCCGTAGGGTCTGC
AGAACAGTACTACAGTCGACACACGTGGCACAAACCTGAGGGGGAGACAC
ATCATGTTGATCACTGGTTCAATCCCATGAGCAGACAAAGAAGCAGGGTT
GAAAAGTGGTACACCTCGCATGAACACTACATAGTCAATGCTGCTCTACA
AAGCTCAGAGTTTGTCCAGAACCTTGCTTCCTCTGGCCCAGCTTCAGTGA
TTGTTGCCAGAGATGAATATGATGAAAATAGAGGGGAAGGTTACAAAACA
TAA
back to top