mRNA_H-akashiwo_Contig1250.3.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1250.3.1 vs. uniprot
Match: A0A7S3YJ72_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YJ72_HETAK) HSP 1 Score: 553 bits (1424), Expect = 8.780e-198 Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 1
Query: 1 PGGDTSAPSSDLLQECLSPQQFGLPSPPHVAPVRRYKKEIRQGLRKKVNQRLAGNGYKPAITEDHGSFTVEIYAPTRRNAPTTRKSTRSLPVHYKSNQGGHHTTTEGPIDQRNPVSHHRENEGTDAACSQPVKAKTPAGMIKHGLTSFSTLAFLKAQEIARLSELSSFYKDWVTAHEGAWQAMCISLWQSDGVHLPDSAPPGGWKEYFWDHAYPARQKWTAAVPSGGGGGRDFKIQVAVRFKPGPKAAGRGFLLPLHQRLQLLDR 795
PGGDTSAPSSDLLQECLSPQQFGLPSPPHVAPVRRYKKEIRQGLRKKVNQRLAGNGYKPAITEDHGSFTVEIYAPTRRNAPTTRKSTRSLPVHYKSNQGGHHTTTEGPIDQRNPVSHHRENEGTDAACSQPVKAKTPAGMIKHGLTSFSTLAFLKAQEIARLSELSSFYKDWVTAHEGAWQAMCISLWQSDGVHLPDSAPPGGWKEYFWDHAYPARQKWTAAVPSGGGGGRDFKIQVAVRFKPGPKAAGRGFLLPLHQRLQLLDR
Sbjct: 37 PGGDTSAPSSDLLQECLSPQQFGLPSPPHVAPVRRYKKEIRQGLRKKVNQRLAGNGYKPAITEDHGSFTVEIYAPTRRNAPTTRKSTRSLPVHYKSNQGGHHTTTEGPIDQRNPVSHHRENEGTDAACSQPVKAKTPAGMIKHGLTSFSTLAFLKAQEIARLSELSSFYKDWVTAHEGAWQAMCISLWQSDGVHLPDSAPPGGWKEYFWDHAYPARQKWTAAVPSGGGGGRDFKIQVAVRFKPGPKAAGRGFLLPLHQRLQLLDR 301
BLAST of mRNA_H-akashiwo_Contig1250.3.1 vs. uniprot
Match: A0A7S1GQB9_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GQB9_HEMAN) HSP 1 Score: 70.5 bits (171), Expect = 4.270e-10 Identity = 36/89 (40.45%), Postives = 53/89 (59.55%), Query Frame = 1
Query: 538 WQAMCISLWQSDGVHLPDSAPPGGW---KEYFWDHAYPARQKWTAAVPSGGGGGRDFKIQVAVRFKPGPKAAGRGFLLPLHQRLQLLDR 795
W +C + G+ LP ++ G + K+ F++H YPAR KW + + DFKI+V VRFKPGP + R +LPLHQRL++L +
Sbjct: 132 WSTLCEVMASDLGLFLPRNSS-GTYVKNKKIFFEHLYPARNKWAESEVAS-----DFKIRVGVRFKPGPPLSNRDLVLPLHQRLKMLKK 214
BLAST of mRNA_H-akashiwo_Contig1250.3.1 vs. uniprot
Match: A0A6T9CI09_9DINO (Hypothetical protein (Fragment) n=2 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A6T9CI09_9DINO) HSP 1 Score: 67.4 bits (163), Expect = 3.810e-9 Identity = 40/103 (38.83%), Postives = 51/103 (49.51%), Query Frame = 1
Query: 535 AWQAMCISLWQSDGVHLPD--SAPPGGWKEYFWDHAYPARQKWTAAVPSGGGG-----------------GRDFKIQVAVRFKPGPKAAGRGFLLPLHQRLQL 786
AWQ C +L + + P G W+ F++ +PAR KWTA SG GRDF IQVAVRF+PG + GR L+PLHQ+L L
Sbjct: 179 AWQVACSTLARERALWCPTPVDGSRGHWRAMFFEQLWPARWKWTADAASGSAARQRQRRLGELGVVEEETGRDFTIQVAVRFRPGAISQGR-LLVPLHQKLML 280
BLAST of mRNA_H-akashiwo_Contig1250.3.1 vs. uniprot
Match: A0A7S1CR04_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CR04_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 4.920e-9 Identity = 51/129 (39.53%), Postives = 67/129 (51.94%), Query Frame = 1
Query: 448 TLAFLKAQEI-ARLSELSSFYKDWVTA--HEGA-WQAMCISLWQSDGVHLPDSAPPG------GWKEYFWDHAYPARQKWTAAVPSGGGGGRD------FKIQVAVRFKPGPKAAGRGFLLPLHQRLQL 786
+L FL QE+ A + LS ++ +T+ H A W + C SL G+ LP A WK+ F++ +PAR KWT A GG D FKIQVAVRFKPG + + LPLHQ L+L
Sbjct: 193 SLTFLTWQELLATIPRLSRRWRAMLTSDWHAPAVWASACNSLVAEHGLWLPHGAHSWLGVGVKAWKKLFFEQLWPARHKWTTAE-----GGTDPAAAHGFKIQVAVRFKPGDRGSS-ALSLPLHQFLRL 315
BLAST of mRNA_H-akashiwo_Contig1250.3.1 vs. uniprot
Match: A0A8J5XYJ6_DIALT (Kinesin motor domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XYJ6_DIALT) HSP 1 Score: 67.4 bits (163), Expect = 5.080e-9 Identity = 40/109 (36.70%), Postives = 49/109 (44.95%), Query Frame = 1
Query: 529 EGAWQAMCISLWQSDGVHLPDS-APP--------------GGWKEYFWDHAYPARQKWTAAVPSGGGGGRD--------FKIQVAVRFKPGPKAAGRGFLLPLHQRLQL 786
E W MC++L + ++ P APP G W +W+ YPAR W AA G FKI VAVR KPGP+ LLPLHQRL+L
Sbjct: 392 ESVWHVMCVALARGAQLYCPPLVAPPSAEARVLAAAASGGGRWARVWWEALYPARNAWRAAAARAAGDEPGAHAGVVARFKIDVAVRLKPGPRDVDAKLLLPLHQRLRL 500
BLAST of mRNA_H-akashiwo_Contig1250.3.1 vs. uniprot
Match: A0A7S4RDI1_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4RDI1_9DINO) HSP 1 Score: 63.9 bits (154), Expect = 7.280e-8 Identity = 42/105 (40.00%), Postives = 55/105 (52.38%), Query Frame = 1
Query: 535 AWQAMCISLWQSDGVHLPDSAPPGG--WKEYFWDHAYPARQKWTAAVPSGGGG----------------GRDFKIQVAVRFKPGPKAAGRGFLLPLHQRLQLLDR 795
AW+ C SL + + P+ G W+ F++ +PAR KW AA GG GRDF IQVAVRF+PG + GR F+ PLHQ+L LL+R
Sbjct: 478 AWRMACESLTRERALWCPEPVESGHGQWRTMFFEELWPARWKWAAA--DGGSEVRQRRLGELGVVEEETGRDFSIQVAVRFRPGATSQGRLFV-PLHQKL-LLER 578
BLAST of mRNA_H-akashiwo_Contig1250.3.1 vs. uniprot
Match: A0A7S0M3X0_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M3X0_9CRYP) HSP 1 Score: 61.2 bits (147), Expect = 2.100e-7 Identity = 42/145 (28.97%), Postives = 69/145 (47.59%), Query Frame = 1
Query: 364 EGTDAACSQPVKAKTPAGMIKHGLTSFSTLAFLKAQEIARLSELSSFYKDWVTAHEGAWQAMCISLWQSDGVHLPDS-APPGGWKEYFWDHAYPARQKWTAAVPSGGGGGRDFKIQVAVRFKPGPKAAGRGFLLPLHQRLQLLDR 795
E +D PVK +I ++ L L Q + +L ++S+ + + E ++ + S+ G++ D A GW+ FW+H YPAR KW S + KI VAVR + ++ +LPLHQRL++L +
Sbjct: 10 EVSDTPDCAPVKGTCHTHIIS-AVSHPDLLRLLGWQGVMKLRQVSATLCEALDNGEDGFKLLSRSIADDVGLYFTDEFAATVGWRNLFWEHLYPARNKWADQKCSV----IEHKISVAVRMRHDDQSRLEDIILPLHQRLRMLKK 149 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1250.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1250.3.1 >prot_H-akashiwo_Contig1250.3.1 ID=prot_H-akashiwo_Contig1250.3.1|Name=mRNA_H-akashiwo_Contig1250.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=265bp PGGDTSAPSSDLLQECLSPQQFGLPSPPHVAPVRRYKKEIRQGLRKKVNQback to top mRNA from alignment at H-akashiwo_Contig1250:54748..55679- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1250.3.1 ID=mRNA_H-akashiwo_Contig1250.3.1|Name=mRNA_H-akashiwo_Contig1250.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=932bp|location=Sequence derived from alignment at H-akashiwo_Contig1250:54748..55679- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1250:54748..55679- >mRNA_H-akashiwo_Contig1250.3.1 ID=mRNA_H-akashiwo_Contig1250.3.1|Name=mRNA_H-akashiwo_Contig1250.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=795bp|location=Sequence derived from alignment at H-akashiwo_Contig1250:54748..55679- (Heterosigma akashiwo CCMP452)back to top |