mRNA_H-akashiwo_Contig1249.7.1 (mRNA) Heterosigma akashiwo CCMP452
|
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1249.7.1 vs. uniprot
Match: A0A7S3UTX0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTX0_HETAK) HSP 1 Score: 435 bits (1118), Expect = 1.440e-151 Identity = 223/227 (98.24%), Postives = 224/227 (98.68%), Query Frame = 3
Query: 108 NNGFGYGKSIEEISDEYQTIITPPGWAFSIWGVIFALEFVFTAWQLFQSSDNLILNEVVGFFWVSACLFQSAWNLTIAAQLFVVSALVLAGIAISLAIICLRITPKEMNNHETVAEYFLVRFSFGLHGGWTCVATLLSFNLAAVANGVSPKGQLVVAIISLAVVVAASLYFGMFKGNLSYSLAICWALFGISSEQGQTSMILGPEIANHIRISSMVCAVSITLFTCL 788
NNGFGYGKSIEEISDEYQTIITPPGWAFSIWGVIFALEFVFTAWQLFQSSDNLILNEVVGFFWVSACLFQSAWNLTIAAQLFVVSALVLAGIAISLAIICLRITPKEMN HETVAEYFLVRFSFGLHGGWTCVATLLSFNLAAVANGVSPKGQLVVAIISLAVVVAASLYFGMFK NLSYSLAICWALFGISSEQGQTSMILGPEIANHIRISSMVCAVSITL TC+
Sbjct: 35 NNGFGYGKSIEEISDEYQTIITPPGWAFSIWGVIFALEFVFTAWQLFQSSDNLILNEVVGFFWVSACLFQSAWNLTIAAQLFVVSALVLAGIAISLAIICLRITPKEMNQHETVAEYFLVRFSFGLHGGWTCVATLLSFNLAAVANGVSPKGQLVVAIISLAVVVAASLYFGMFKDNLSYSLAICWALFGISSEQGQTSMILGPEIANHIRISSMVCAVSITLLTCV 261
BLAST of mRNA_H-akashiwo_Contig1249.7.1 vs. uniprot
Match: A0A7S2V2F8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2F8_9STRA) HSP 1 Score: 140 bits (353), Expect = 4.640e-36 Identity = 83/221 (37.56%), Postives = 119/221 (53.85%), Query Frame = 3
Query: 126 GKSIEEISDEYQTIITPPGWAFS-IWGVIFALEFVFTAWQLFQSSDNLILNEVVGFFWVSACLFQSAWNLTIAAQLFVVSALVLAGIAISLAIICLRITPKEMNNHE---TVAEYFLVRFSFGLHGGWTCVATLLSFNLAAVANGVSPKGQLVVAIISLAVVVAASLYFGMFKGNLSYSLAICWALFGISSEQGQTSMILGPEIANHIRISSMVCAVSITL 776
GKS EE+S++Y+TIITP GWAF IW +IF LE F WQ ++ +GF++ +AC+ Q W + AA+ V SA++L GIA SLA C +T + + Y +V GLHGGWT A L++ +LA G S + QLVVA +SL + L + + +YSLA+ W L I Q T LG + A + +S+ A+ + L
Sbjct: 43 GKSNEEVSNQYETIITPAGWAFGPIWAIIFILEAAFVIWQCLPTARGNPWILGIGFWFAAACILQGCWGIAFAAEKIVASAVLLLGIAASLAFACSELTKLRKSAEAPELSWGRYVVVWLPLGLHGGWTLAAGLVNVSLAVYVEGASAQAQLVVAAVSLGIAAVGGLVASR-QMHAAYSLAVAWGLLAIGLNQATTRERLGEDTAQALEYTSVALAIVLAL 262
BLAST of mRNA_H-akashiwo_Contig1249.7.1 vs. uniprot
Match: A0A6H5LEQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LEQ8_9PHAE) HSP 1 Score: 131 bits (330), Expect = 1.370e-32 Identity = 83/239 (34.73%), Postives = 132/239 (55.23%), Query Frame = 3
Query: 57 NAGAMYWLLF*TAHLHF-----NNGFGY-GKSIEEISDEYQTIITPPGWAFSIWGVIFALEFVFTAWQLFQSS-DNLILNEVVGFFWVSACLFQSAWNLTIAAQLFVVSALVLAGIAISL--AIICLRITPKEMNNHETVAEYFLVRFSFGLHGGWTCVATLLSFNLAAVANGVSPKGQLVVAIISLAVVVAASLYFGMFKGNLSYSLAICWALFGISSEQGQTSMILGPEIANHIRIS 746
+ M WL+ A+L + FG+ G + E+SD+ T +TP GWAFSIWGVIF E VF W F+S+ D+ ++ E VG ++ ACL Q+AW++ A +L +VSA++L I +SL A+I L + E ++ V F GLHGGWT A +++ N+A G +L I+SL + + + N Y LA+ WA+ GI+S+Q + LG ++++ + ++
Sbjct: 7 SGSRMLWLVNVLAYLINAVVVGGSNFGWWGATNAEVSDDNPTFVTPNGWAFSIWGVIFFFEAVFVIWGAFRSNRDSRVVQEGVGCWFAIACLIQAAWSIVFAQELLIVSAILLCLITLSLTLAVISLSLIQCEEGITLFTLPFWGVYFPIGLHGGWTLAAAIVNINVALELRG-DTGSELAALILSLVGAALGAAFISLVFHNQPYLLAVAWAIAGIASKQDYRFVQLGKDLSDGVNVA 244
BLAST of mRNA_H-akashiwo_Contig1249.7.1 vs. uniprot
Match: A0A7S1ZTZ5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZTZ5_TRICV) HSP 1 Score: 108 bits (269), Expect = 8.800e-24 Identity = 74/226 (32.74%), Postives = 118/226 (52.21%), Query Frame = 3
Query: 129 KSIEEISDEYQTIITPPGWAFSIWGVIFALEFVFTAWQLFQSSDNLI-LNEVVGFFWVSACLFQSAWNLTIAAQLFVVSALVLAGIAISLAIICLRITPKEMNNHETVAEYFLVRFSFGLHGGWTCVATLLSFNLAAVANGVSPKGQLVVAIISLAVVVAASLYFGMF--KGNLSYSLAICWALFGISSEQGQTSMILGPEIANH-IRISSM--VCAVSITLFTCL 788
KS ++S +YQTI+TP GWAFSIWG+IFA + +FT QL + +L + + V +++ FQ W A ++ +S +V+ I SL L + + T E++L+RF F +H GW AT+++ NL VA+ VSP Q +VA +SL ++ +L +F N+ + + W GI +E + + +NH I + + C I LF L
Sbjct: 43 KSNADVSAKYQTIVTPVGWAFSIWGIIFAAQALFTVVQLLPTFRSLPQVQQGVKYWYALVSAFQIVWTFVFACEMIWISCVVMVFILSSLC--ALLQSQSRAASDNTRKEFWLLRFPFQIHAGWIIAATVVNINLVLVASDVSPVIQAMVAALSLVAILCIALSALVFPTSTNVVIPVTLAWGAGGIWAELNAPKQSILDKFSNHTINVFKIGAACICLILLFAVL 266
BLAST of mRNA_H-akashiwo_Contig1249.7.1 vs. uniprot
Match: A0A7S1YFE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YFE7_9STRA) HSP 1 Score: 106 bits (265), Expect = 2.070e-23 Identity = 64/187 (34.22%), Postives = 114/187 (60.96%), Query Frame = 3
Query: 141 EISDEYQTIITPPGWAFSIWGVIFALEFVFTAWQLF-QSSDNLILNEVVGFFWVSACLFQSAWNLTIAAQLFVVSAL-VLAGIAISLAIICLRITPKEMNNHETVAEYFLVRFSFGLHGGWTCVATLLSFNLAAVANGVSPKGQLVVAIISLAVVVAASLY--FGMFKGNLSYSLAICWALFGISSE 689
E+S++YQT++TP G AFSIWG+IF + +F QL + ++ + VG+++++ C FQ+AW A ++ ++ + ++ +AI+ + + + T++E++L+RF F +H GW A+ L+ N+ AVA+ +P+ QL + IISLA + A S++ FG+ + N + +L I WA I SE
Sbjct: 52 ELSEKYQTLVTPKGTAFSIWGIIFIFQAIFVVVQLLPRFRAKAMVQDGVGYWYIATCAFQAAWTFAFAYEIIWLALIFIIXXXXXXVAIVYYQ---YYLPSEGTLSEFWLLRFPFMIHCGWLTAASTLNVNVQAVASNAAPEIQLAMGIISLAYLHAVSVWVVFGLTRPNYTIALVISWASGWIYSE 235
BLAST of mRNA_H-akashiwo_Contig1249.7.1 vs. uniprot
Match: A0A813LJ65_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813LJ65_POLGL) HSP 1 Score: 107 bits (266), Expect = 3.130e-23 Identity = 71/214 (33.18%), Postives = 114/214 (53.27%), Query Frame = 3
Query: 96 HLHFNNGFGYGKSIEEISDEYQTIITPPGWAFSIWGVIFALEFVFTAWQLFQSSDNLILNEVVGFFWVSACLFQSAWNLTIAAQLFVVSALVLAGIAISLAIICLRITPKEMNNHETVAEYFLVRFSFGLHGGWTCVATLLSFNLAAVANGVSPKGQLVVAIISLAVVVAASLYFGMF--KGNLSYSLAICWALFGISSEQGQTSMILGPEIAN 731
HL ++ + +G E S +YQT++TP GWAFSIWG IF E VF Q+ + + ++V +W +AC FQ AW+ A+ + + + + GI SL + L +T +++EY+L+R F LH GW A+ ++ ++ A + S L +AI+SLAV++A + F + K + S WAL I +E G + +L P N
Sbjct: 44 HLLVSHWYLWGNEHELESKKYQTVVTPAGWAFSIWGPIFIWEGVFAVAQMLPKHRSSPVAQLVTPWWSAACAFQVAWSAVFGAEFLLAACVCMLGILGSL--LGLLLTADRARAPLSLSEYWLLRAPFSLHAGWVIAASAVNASVLADSWMCSAGTLLALAIVSLAVILAVVVLFVVASPKPDAIISFVAAWALGAIHAELGSATHLLDPSRFN 255
BLAST of mRNA_H-akashiwo_Contig1249.7.1 vs. uniprot
Match: A0A1Q9DTY9_SYMMI (Uncharacterized protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9DTY9_SYMMI) HSP 1 Score: 107 bits (268), Expect = 3.360e-23 Identity = 78/238 (32.77%), Postives = 119/238 (50.00%), Query Frame = 3
Query: 123 YGKSIEEISDEYQTIITPPGWAFSIWGVIFALEFVFTAWQLFQSSDNLILNEVVGFFWVSACLFQSAWNLTIAAQLFVVSALVLAGIAISLAIICLRITPKEMNNHETVAEYFLVRFSFGLHGGWTCVATLLSFNLAAVANGVSPKGQLVVAIISLA--VVVAASLYFGMFKGNLSYSLAICWALFGISSEQGQTSMILGPEIA-----------NHIRIS----SMVCAVSITLFTC 785
+G + +S +Y T+ITP G+AFSIWG IF E VF Q+F S +L + + +W+SACLFQ AW L A ++ + + +AGI +SL + LR+ E + +EY+L+R F LH GW AT L+ + A P+ L +A+ A V+ F K + +L CWAL G+ SE + + + +RI+ S++C V+ T TC
Sbjct: 34 FGPTNSSLSAKYHTLITPSGFAFSIWGPIFIWEGVFAVAQMFPSYRGSMLVKTITPWWLSACLFQCAWTLFFAQEIMIGAMTCMAGILVSLMVGILRLDFLE---EMSTSEYWLLRAPFSLHCGWIVAATSLNICVVADYYKGPPEVMLALAMFCFAGIAVIVTVFTFASPKADPIIALVGCWALLGMVSELTDAEKLRDATVRWNYFDWPQYVISAVRITAFLLSLLCIVAATDGTC 268
BLAST of mRNA_H-akashiwo_Contig1249.7.1 vs. uniprot
Match: A0A7S2MNG6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MNG6_9STRA) HSP 1 Score: 106 bits (264), Expect = 3.780e-23 Identity = 66/191 (34.55%), Postives = 108/191 (56.54%), Query Frame = 3
Query: 126 GKSIEEISDEYQTIITPPGWAFSIWGVIFALEFVFTAWQLFQSSDNL-ILNEVVGFFWVSACLFQSAWNLTIAAQLFVVSALVLAGIAISLAIICLRITPKEMNNHETVAEYFLVRFSFGLHGGWTCVATLLSFNLAAVANGVSPKGQLVVAIISLAVVVAASLYFGMFKG--NLSYSLAICWALFGISSE 689
G++ IS +YQTIITP GWAFSIWG+IF ++ +F QL L ++ E VG+++ C+FQ AW + ++ +S L +A I ++L I + ++ T +++L+RF F +H GW VA ++ N+ VA+ + Q+ AI+SLA + +S+Y K + + +L I WA I+ E
Sbjct: 33 GENNATISAKYQTIITPAGWAFSIWGLIFTMQAIFVVLQLLPDHRRLPLVKEGVGYWYFGTCIFQVAWTCAFSYEVLWLSVLFMALILLTL--IAIIKNQSKIPPDGTNQDFWLLRFPFSIHCGWIMVAFAVNVNVLVVASNAKSRTQVEWAIVSLAYIAFSSIYVLFCKRTTDTTMALVIAWAALAIAIE 221
BLAST of mRNA_H-akashiwo_Contig1249.7.1 vs. uniprot
Match: A0A813GB70_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813GB70_POLGL) HSP 1 Score: 106 bits (264), Expect = 9.860e-23 Identity = 68/205 (33.17%), Postives = 111/205 (54.15%), Query Frame = 3
Query: 123 YGKSIEEISDEYQTIITPPGWAFSIWGVIFALEFVFTAWQLFQSSDNLILNEVVGFFWVSACLFQSAWNLTIAAQLFVVSALVLAGIAISLAIICLRITPKEMNNHETVAEYFLVRFSFGLHGGWTCVATLLSFNLAAVANGVSPKGQLVVAIISLAVVVAASLYFGMF--KGNLSYSLAICWALFGISSEQGQTSMILGPEIAN 731
+G++ +S +YQT++TP GWAFSIWG IF E VF Q+ + + ++V +W +AC FQ AW+ A+ + + + + GI SL + L +T +++EY+L+R F LH GW A+ ++ ++ A + S L +AI+SLAV++A + F + K + S WAL I +E G + +L P N
Sbjct: 47 FGETNTNLSKKYQTVVTPAGWAFSIWGPIFIWEGVFAVAQMLPKHRSSPVAQLVTPWWSAACAFQVAWSAVFGAEFLLAACVCMLGILGSL--LGLLLTADRARAPLSLSEYWLLRAPFSLHAGWVIAASAVNASVLADSWMCSAGTLLALAIVSLAVILAVVVLFVVASPKPDAIISFVAAWALGAIHAELGSATHLLDPSRFN 249
BLAST of mRNA_H-akashiwo_Contig1249.7.1 vs. uniprot
Match: A0A6T9FPT0_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A6T9FPT0_ALECA) HSP 1 Score: 105 bits (261), Expect = 9.950e-23 Identity = 70/205 (34.15%), Postives = 107/205 (52.20%), Query Frame = 3
Query: 123 YGKSIEEISDEYQTIITPPGWAFSIWGVIFALEFVFTAWQLFQSSDNLILNEVVGFFWVSACLFQSAWNLTIAAQLFVVSALVLAGIAISLAIICLRITPKEMNNHETVAEYFLVRFSFGLHGGWTCVATLLSFNLAAVANGVSPKGQLVVAIISL-AVVVAASLY-FGMFKGNLSYSLAICWALFGISSEQGQTSMILGPEIAN 731
+G + ++S +YQ+++TP GWAFSIWG IF E V T Q+ ++ V FW+ ACL Q+ W L A + V+S L++ GI + L +++ T E++L+R LH GW A+ ++ N+ AV++ P L VAI +L A+ V A+LY F K + SL + WAL + SE + P N
Sbjct: 32 FGPTNGDLSKKYQSLVTPAGWAFSIWGPIFIWEGVLTVAQMLPGLRASHVSRSVAPFWLFACLCQTGWTLAFAREAMVLSELLMLGILVGLMGAAFSADLEDI----TAKEFWLLRGPLSLHLGWIICASAVNTNVLAVSHLAGPGSMLAVAIAALVAIAVLAALYAFAAPKPDCIPSLVVAWALLAVDSELQSARNLQDPSKFN 232 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1249.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1249.7.1 >prot_H-akashiwo_Contig1249.7.1 ID=prot_H-akashiwo_Contig1249.7.1|Name=mRNA_H-akashiwo_Contig1249.7.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=121bp MNNHETVAEYFLVRFSFGLHGGWTCVATLLSFNLAAVANGVSPKGQLVVAback to top mRNA from alignment at H-akashiwo_Contig1249:97539..98469+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1249.7.1 ID=mRNA_H-akashiwo_Contig1249.7.1|Name=mRNA_H-akashiwo_Contig1249.7.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=931bp|location=Sequence derived from alignment at H-akashiwo_Contig1249:97539..98469+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1249:97539..98469+ >mRNA_H-akashiwo_Contig1249.7.1 ID=mRNA_H-akashiwo_Contig1249.7.1|Name=mRNA_H-akashiwo_Contig1249.7.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=363bp|location=Sequence derived from alignment at H-akashiwo_Contig1249:97539..98469+ (Heterosigma akashiwo CCMP452)back to top |