mRNA_H-akashiwo_Contig1241.6.2 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1241.6.2
Unique NamemRNA_H-akashiwo_Contig1241.6.2
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1241.6.2 vs. uniprot
Match: A0A7S3URR7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3URR7_HETAK)

HSP 1 Score: 275 bits (703), Expect = 1.330e-88
Identity = 138/261 (52.87%), Postives = 167/261 (63.98%), Query Frame = 1
Query:    4 IPRFECSETGLRDGKAYLEEYGYAVFKEVISKDDIEDAKNLFWDFI-------GTETFA---------SRLQDSKTWENQCWPGDPRTGIFAAYGAGQSPFSWFLRTRPKVKEVFASIWETDDLVTSFDGFNAFRPWYDNEKWKTEGGWFHLDQNPALKPDKECIQGLVSLYDTTAGTGGLTVVPGSHTAF--REVWGAEELERLRGLKRLGGNGDYVHVPEGHRLLGVGGG----PRLVACRAGDLCLWDSRTVHCNQPG 720
             P F+CS+ GL  GKAYLE++GYAVF  V+SK++IE A+ LFWD+I       G +  A          R  +  TW+ + WP DP+TGI   YGAGQSPFSW++RTRPKVK VF++IWETDDL+TSFDGFN FRPW +  +W+T+  W+HLDQN   KP  EC QGLV+L   T  TGGL VVPGSH  F     WG  EL   +   R     D++ +P GH  L         PRLV C AGDLCLWDSRTVHCN PG
Sbjct:   54 FPSFDCSKPGLHAGKAYLEQHGYAVFTNVLSKEEIEKAEELFWDYIEGIPERMGMDLKALQEYLQGGWPRRGEPSTWDTKFWPADPKTGIIWRYGAGQSPFSWYIRTRPKVKAVFSAIWETDDLLTSFDGFNVFRPWQNKPEWRTQPSWYHLDQNAVTKPGFECAQGLVALTAATGATGGLAVVPGSHRRFAAHSAWG--ELAARQKNHR-----DFLVLPPGHPALDPAHKDYVRPRLVTCGAGDLCLWDSRTVHCNVPG 307          
BLAST of mRNA_H-akashiwo_Contig1241.6.2 vs. uniprot
Match: A0A0G4FG15_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FG15_9ALVE)

HSP 1 Score: 238 bits (607), Expect = 1.410e-74
Identity = 110/191 (57.59%), Postives = 135/191 (70.68%), Query Frame = 1
Query:  148 ETFASRLQDSKTWENQCWPGDPRTGIFAAYGAGQSPFSWFLRTRPKVKEVFASIWETDDLVTSFDGFNAFRPWYDNEKWKTEGGWFHLDQNPALKPDKECIQGLVSLYDTTAGTGGLTVVPGSHTAFREVWGAEELERLRGLKRLGGNGDYVHVPEGHRLLGVGGGPRLVACRAGDLCLWDSRTVHCNQPG 720
            E  A R    +TWE + WPG   TGI  ++GAGQSPF WF+RTRP+V++VF+++WETDDL+ SFDGF AFRPW  N KWKT+GGW+H+DQNP  KPD+ C+QGLVSLYD T+  GGLTV+PGSH  F         +R +   RL G  D+V VP    ++  GG  RLV C+AGDL LWDSRTVHCN PG
Sbjct:   18 EVSAPRRHSPETWEGRSWPGGAETGIINSWGAGQSPFQWFVRTRPQVRDVFSALWETDDLLCSFDGFGAFRPWRLNPKWKTQGGWWHVDQNPISKPDRVCVQGLVSLYDGTSSVGGLTVIPGSHKEFCAFG-----KRAQKEGRLMGKTDFVPVPHEDPIMSPGG--RLVLCKAGDLLLWDSRTVHCNTPG 201          
BLAST of mRNA_H-akashiwo_Contig1241.6.2 vs. uniprot
Match: A0A7S3Z931_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z931_9EUKA)

HSP 1 Score: 234 bits (597), Expect = 2.040e-72
Identity = 113/244 (46.31%), Postives = 158/244 (64.75%), Query Frame = 1
Query:   25 ETGLRDGKAYLEEYGYAVFKEVISKDDIEDAKNLFWDFIGTETFASRLQ-------------DSKTWENQCWPGDPRTGIFAAYGAGQSPFSWFLRTRPKVKEVFASIWETDDLVTSFDGFNAFRPWYDNEKWKTEGGWFHLDQNPALKPDKECIQGLVSLYDTTAGTGGLTVVPGSHTAFREVWGAEELERLRGLKRLGGNGDYVHVPEGHRLLGVGGGPRLVACRAGDLCLWDSRTVHCNQP 717
            E G  DG  YLE+ GY V K V+ + +++ A++LFW+++  E   +RL+             D+ TW+   +PG+P  GI A  GAGQSPFSWF+R+R +VK+VF ++W TDDL+ SFDGF +FRPW  +  W+T GGWFH+DQNP  KP   C+QGLVS+YD    TGGLTV+PGS + F E+      ++ + L R+G   D++ +P    +L      +LV+C+AGDLCLWDSR +HCN P
Sbjct:   82 EKGRADGLKYLEKNGYVVAKAVLDQKEVKKARSLFWEWV--EELPNRLEVDAEKAKAWPKRGDASTWDKN-FPGNPDNGIIANMGAGQSPFSWFVRSRARVKQVFEAVWATDDLLVSFDGFGSFRPWSYDPSWRTRGGWFHVDQNPIKKPGLHCVQGLVSMYDQDKATGGLTVIPGSQSHFPEL-----AKKYQSLCRMGL--DFIPIPRADSVLKKK--IKLVSCKAGDLCLWDSRVIHCNTP 313          
BLAST of mRNA_H-akashiwo_Contig1241.6.2 vs. uniprot
Match: A0A819BS32_9BILA (Hypothetical protein n=3 Tax=unclassified Rotaria TaxID=2631648 RepID=A0A819BS32_9BILA)

HSP 1 Score: 221 bits (563), Expect = 9.940e-69
Identity = 108/242 (44.63%), Postives = 149/242 (61.57%), Query Frame = 1
Query:    1 MIPRFECS-ETGLRDGKAYLEEYGYAVFKEVISKDDIEDAKNLFWDFIGTETFAS-RLQDSKTWENQCWPGDPRTGIFAAYGAGQSPFSWFLRTRPKVKEVFASIWETDDLVTSFDGFNAFRPWYDNEKWKTEGGWFHLDQNPALKPDKECIQGLVSLYDTTAGTGGLTVVPGSHTAFREVWGAEELERLRGLKRLGGNGDYVHVPEGHRLL-GVGGGPRLVACRAGDLCLWDSRTVHCNQP 717
            + PR+  + +  L +G AYL E+GY VF +++S+++I+  K+L W+F         R  DS+TW N  WPG P +G+    G GQS F W +R+  KVK VF  IW T++L+ SFDG   FR W+ + KWKT GGW+H+DQNP  KPD+ C+QGLVSL      TGGL ++P +H  F E+    ++ R        G GD++ +P  HR+L G     +LV C+AGDL LWDSR VHCN P
Sbjct:   20 LTPRYSVTNDESLNEGIAYLNEHGYTVFSDILSQEEIKTNKDLLWNFFENIPGCHIRRNDSETWSN-FWPGFPTSGVVNNCGIGQSDFMWNIRSNRKVKRVFTRIWNTNELLVSFDGCGVFRNWHYDPKWKTNGGWYHVDQNPIEKPDRCCVQGLVSLMKQNETTGGLIIIPNTHLRFAEL---NDIPR--------GRGDFIRIPHNHRILDGDQAIAKLVQCQAGDLVLWDSRLVHCNAP 249          
BLAST of mRNA_H-akashiwo_Contig1241.6.2 vs. uniprot
Match: A0A820ZNA0_9BILA (Hypothetical protein n=2 Tax=unclassified Rotaria TaxID=2631648 RepID=A0A820ZNA0_9BILA)

HSP 1 Score: 219 bits (557), Expect = 3.560e-67
Identity = 107/242 (44.21%), Postives = 149/242 (61.57%), Query Frame = 1
Query:    1 MIPRFECS-ETGLRDGKAYLEEYGYAVFKEVISKDDIEDAKNLFWDFIGTETFAS-RLQDSKTWENQCWPGDPRTGIFAAYGAGQSPFSWFLRTRPKVKEVFASIWETDDLVTSFDGFNAFRPWYDNEKWKTEGGWFHLDQNPALKPDKECIQGLVSLYDTTAGTGGLTVVPGSHTAFREVWGAEELERLRGLKRLGGNGDYVHVPEGHRLL-GVGGGPRLVACRAGDLCLWDSRTVHCNQP 717
            + PR+  + + GL +G AYL E+GY VF +++S+++I+  K+L W+F         R  D +TW +  WPG P +G+    G GQS F W +R+  KVK VF  IW T++L+ SFDG   FR W+ + KWKT GGW+H+DQNP  KPD+ C+QGLVSL +    TGGL ++P +H  F E+    +L R        G  D++ +P  HR+L G     +LV C+AGDL LWDSR VHCN P
Sbjct:   20 LTPRYSVTNDEGLNEGIAYLNEHGYTVFSDILSQEEIKTNKDLLWNFFENIPGCHIRRNDPETWSS-FWPGFPTSGVVNNCGIGQSDFMWNIRSNRKVKRVFTRIWNTNELLVSFDGCGVFRNWHYDPKWKTNGGWYHVDQNPIEKPDRCCVQGLVSLMNQNETTGGLIIIPNTHLRFAEL---NDLPR--------GRSDFIRIPRNHRILDGDQAIAKLVQCQAGDLVLWDSRLVHCNAP 249          
BLAST of mRNA_H-akashiwo_Contig1241.6.2 vs. uniprot
Match: A0A817X5Y8_9BILA (Hypothetical protein n=2 Tax=Rotaria TaxID=231623 RepID=A0A817X5Y8_9BILA)

HSP 1 Score: 219 bits (559), Expect = 7.940e-67
Identity = 106/230 (46.09%), Postives = 145/230 (63.04%), Query Frame = 1
Query:   34 LRDGKAYLEEYGYAVFKEVISKDDIEDAKNLFWDFIGT--ETFASRLQDSKTWENQCWPGDPRTGIFAAYGAGQSPFSWFLRTRPKVKEVFASIWETDDLVTSFDGFNAFRPWYDNEKWKTEGGWFHLDQNPALKPDKECIQGLVSLYDTTAGTGGLTVVPGSHTAFREVWGAEELERLRGLKRLGGNGDYVHVPEGHRLLGVGGGPRLVACRAGDLCLWDSRTVHCNQP 717
            L+ G  +L EYGYAVF  V++ + ++ + NLFW+++    E +  +  +S+TW+   WPG P  G+   +G GQS F WF+R  P VK+VF+ IW +D+L  SFDG   FR W+ N++WKT GGW+H DQNP  KP++  IQGLV+L D    TG L VVPGSH  F E+  A + +R+ G        DY+ VP+ H +      PRLV C+AGDL +WDSR VHCN P
Sbjct:   44 LQGGIEHLNEYGYAVFSNVLNNEQVDLSVNLFWNYLENLEEPYRIQRNNSQTWDKP-WPGAPHIGLVNRHGIGQSEFMWFIRGNPNVKKVFSHIWNSDELCVSFDGAGCFRNWHLNKEWKTSGGWYHCDQNPFKKPNRCSIQGLVALTDNNESTGSLVVVPGSHEHFLELPSAAQKKRIWG--------DYMAVPQQHSIFEKLR-PRLVKCKAGDLVVWDSRCVHCNTP 263          
BLAST of mRNA_H-akashiwo_Contig1241.6.2 vs. uniprot
Match: A0A815B8C6_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A815B8C6_9BILA)

HSP 1 Score: 211 bits (538), Expect = 4.750e-64
Identity = 109/243 (44.86%), Postives = 138/243 (56.79%), Query Frame = 1
Query:    7 PRFECS-ETGLRDGKAYLEEYGYAVFKEVISKDDIEDAKNLFWDFI-GTETFASRLQDSKTWENQCWPGDPRTGIFAAYGAGQSPFSWFLRTRPKVKEVFASIWETDDLVTSFDGFNAFRPWYDNEKWKTEGGWFHLDQNPALKPDKECIQGLVSLYDTTAGTGGLTVVPGSHTAFREVWGAEELERLRGLKRLGGNGDYVHVPEGHRLLGVGGG-PRLVACRAGDLCLWDSRTVHCNQPGAA 726
            PRF  + +  L+DG  YL E GY V  +V+++D+I + K L W FI      A +  D  TW NQ WP     G+ A +G GQS F W +R+ P+VK VFA +W T  L+ SFDG   FR W  N  WKT GGW H+DQNP  KPD+ CIQG+VSL D    +GGL V P +H  F E+    E            + D+V VP  H ++  G    +LV CRAGDL LWDSR +HCN P  A
Sbjct:   13 PRFSVTNDKELQDGFTYLNENGYVVISDVLNQDEINENKQLLWKFIENASKGAIKRDDPDTWSNQ-WPSFSSHGLIATFGIGQSDFLWSVRSHPQVKNVFARLWNTRQLLVSFDGCGVFRDWRYNPMWKTSGGWEHVDQNPKKKPDRCCIQGIVSLTDQNERSGGLIVYPHTHLRFTELCDITE-----------NSNDFVKVPSNHSIMNHGQTLGKLVHCRAGDLILWDSRLIHCNSPATA 243          
BLAST of mRNA_H-akashiwo_Contig1241.6.2 vs. uniprot
Match: A0A821TXY1_9BILA (Hypothetical protein n=4 Tax=unclassified Rotaria TaxID=2631648 RepID=A0A821TXY1_9BILA)

HSP 1 Score: 209 bits (532), Expect = 4.500e-63
Identity = 105/240 (43.75%), Postives = 143/240 (59.58%), Query Frame = 1
Query:    7 PRFECSET-GLRDGKAYLEEYGYAVFKEVISKDDIEDAKNLFWDFIGTETFAS-RLQDSKTWENQCWPGDPRTGIFAAYGAGQSPFSWFLRTRPKVKEVFASIWETDDLVTSFDGFNAFRPWYDNEKWKTEGGWFHLDQNPALKPDKECIQGLVSLYDTTAGTGGLTVVPGSHTAFREVWGAEELERLRGLKRLGGNGDYVHVPEGHRLLGVGGG-PRLVACRAGDLCLWDSRTVHCNQP 717
            PRF  +    + DG  YL E+GYAVF +V+S+D+I   K+L W F  T      R  D  TW N  WPG P  G+    G GQS F W +R+   +K +++ IW T++L+ SFDG   FR W  + KWKT+GGW+H+DQNP LKP++ CIQG VSL +    TGGL VVP +H  F ++   E  +R +         D++ +P  H++L  G    +L+ C+AGDL LWDSR VHCN P
Sbjct:   21 PRFSVTNNESINDGVNYLNEHGYAVFSDVLSQDEININKDLLWKFFETIPGCHIRRDDPSTWSNY-WPGFPSHGVVNNCGIGQSDFMWNIRSNRNMKHIYSQIWNTNELLVSFDGCGVFRDWRYDSKWKTKGGWYHVDQNPVLKPNRCCIQGFVSLTNQNETTGGLIVVPNTHLRFAQL--TELGQRPK---------DFIMIPRDHQILDRGHAIGKLIQCQAGDLVLWDSRLVHCNSP 248          
BLAST of mRNA_H-akashiwo_Contig1241.6.2 vs. uniprot
Match: A0A816XF01_9BILA (Hypothetical protein n=7 Tax=Rotaria TaxID=231623 RepID=A0A816XF01_9BILA)

HSP 1 Score: 208 bits (530), Expect = 9.240e-63
Identity = 111/243 (45.68%), Postives = 138/243 (56.79%), Query Frame = 1
Query:    1 MIPRFECSET-GLRDGKAYLEEYGYAVFKEVISKDDIEDAKNLFWDFIGTETFASRLQ--DSKTWENQCWPGDPRTGIFAAYGAGQSPFSWFLRTRPKVKEVFASIWETDDLVTSFDGFNAFRPWYDNEKWKTEGGWFHLDQNPALKPDKECIQGLVSLYDTTAGTGGLTVVPGSHTAFREVWGAEELERLRGLKRLGGNGDYVHVPEGHRLLGVGGG-PRLVACRAGDLCLWDSRTVHCNQP 717
            + PRF   +   L DG AYL  +GYAVF +V+S+D+I    +  W F        R+Q  D  TW N  WPG    G+    G GQS F W +R+ P VK VF+ IW T+ L+ SFDG   FR W  + +WKT+GGWFH+DQNP  KPD+ CIQG VSL +    TGG   +P SH  F E         L  L R  G  D+V +P  HR+L  G    +LV C+AGDL LWDSR VHCN P
Sbjct:   20 LTPRFSIVDNESLNDGIAYLNNHGYAVFSDVLSQDEISTNIDSLWQFFENIP-GCRIQRRDPSTWSNY-WPGFTTHGVVNNCGIGQSDFMWNIRSNPNVKRVFSQIWNTNQLLVSFDGCGIFRDWRYDARWKTKGGWFHVDQNPVSKPDRCCIQGFVSLTNQNENTGGFIAIPNSHLRFAE---------LATLAR--GTRDFVMIPRDHRILDNGRAIGKLVQCQAGDLVLWDSRLVHCNSP 249          
BLAST of mRNA_H-akashiwo_Contig1241.6.2 vs. uniprot
Match: A0A815BG76_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A815BG76_9BILA)

HSP 1 Score: 209 bits (531), Expect = 1.200e-62
Identity = 104/244 (42.62%), Postives = 144/244 (59.02%), Query Frame = 1
Query:    7 PRFEC-SETGLRDGKAYLEEYGYAVFKEVISKDDIEDAKNLFWDFIGTETFASRLQDSK-TWENQCWPGDPRTGIFAAYGAGQSPFSWFLRTRPKVKEVFASIWETDDLVTSFDGFNAFRPWYDNEKWKTEGGWFHLDQNPALKPDKECIQGLVSLYDTTAGTGGLTVVPGSHTAFREVWGAEELERLRGLKRLGGNGDYVHVPEGHRLLGVGGGP-----RLVACRAGDLCLWDSRTVHCNQP 717
            PRF   S   L++G  YL E GYAVF +V+++++++  KNLFWDF+         +D   TW+N  WP  P +G+ + +G GQS F W +R    VK++F++IW+TD+L+ SFDG   FR W  N+ WKTEGGW H+DQ+P  KP+K CIQGLV++ D    TGGL V P S   F        LE    +       D+V +P  H++L           +LV C+AGDL +WDSR +HCN P
Sbjct:   32 PRFSVNSAISLQEGLEYLNENGYAVFSDVLTEEEVKTNKNLFWDFLEQAAHNQIDRDKHDTWDNH-WPARPLSGVISQHGIGQSKFLWNVRNNRNVKKIFSNIWQTDELLVSFDGAGCFRDWSFNQSWKTEGGWIHVDQHPVRKPNKCCIQGLVAITDNDEFTGGLVVYPKSQKRF--------LELTNLITPTHSGRDFVKIPPTHQILRQSESSELIKFKLVKCKAGDLVVWDSRVIHCNTP 266          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1241.6.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3URR7_HETAK1.330e-8852.87Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A0G4FG15_9ALVE1.410e-7457.59Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A7S3Z931_9EUKA2.040e-7246.31Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
A0A819BS32_9BILA9.940e-6944.63Hypothetical protein n=3 Tax=unclassified Rotaria ... [more]
A0A820ZNA0_9BILA3.560e-6744.21Hypothetical protein n=2 Tax=unclassified Rotaria ... [more]
A0A817X5Y8_9BILA7.940e-6746.09Hypothetical protein n=2 Tax=Rotaria TaxID=231623 ... [more]
A0A815B8C6_9BILA4.750e-6444.86Hypothetical protein n=1 Tax=Rotaria sp. Silwood1 ... [more]
A0A821TXY1_9BILA4.500e-6343.75Hypothetical protein n=4 Tax=unclassified Rotaria ... [more]
A0A816XF01_9BILA9.240e-6345.68Hypothetical protein n=7 Tax=Rotaria TaxID=231623 ... [more]
A0A815BG76_9BILA1.200e-6242.62Hypothetical protein n=1 Tax=Didymodactylos carnos... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1241contigH-akashiwo_Contig1241:252826..254033 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog227086.JGI_V11_90374
PFAMsPhyH
Model size726
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons4
Evalue4.56e-75
EggNOG OGs28SGF@1|root,2QZ63@2759|Eukaryota
DescriptionPhytanoyl-CoA dioxygenase (PhyH)
Cds size726
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387129.6248474-CDS-H-akashiwo_Contig1241:252825..2529971681387129.6248474-CDS-H-akashiwo_Contig1241:252825..252997Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1241 252826..252997 +
1681387129.6369538-CDS-H-akashiwo_Contig1241:253177..2532381681387129.6369538-CDS-H-akashiwo_Contig1241:253177..253238Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1241 253178..253238 +
1681387129.6468754-CDS-H-akashiwo_Contig1241:253357..2535601681387129.6468754-CDS-H-akashiwo_Contig1241:253357..253560Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1241 253358..253560 +
1681387129.6614342-CDS-H-akashiwo_Contig1241:253743..2540331681387129.6614342-CDS-H-akashiwo_Contig1241:253743..254033Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1241 253744..254033 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1241.6.2prot_H-akashiwo_Contig1241.6.2Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1241 252826..254033 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1241.6.2

>prot_H-akashiwo_Contig1241.6.2 ID=prot_H-akashiwo_Contig1241.6.2|Name=mRNA_H-akashiwo_Contig1241.6.2|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=242bp
MIPRFECSETGLRDGKAYLEEYGYAVFKEVISKDDIEDAKNLFWDFIGTE
TFASRLQDSKTWENQCWPGDPRTGIFAAYGAGQSPFSWFLRTRPKVKEVF
ASIWETDDLVTSFDGFNAFRPWYDNEKWKTEGGWFHLDQNPALKPDKECI
QGLVSLYDTTAGTGGLTVVPGSHTAFREVWGAEELERLRGLKRLGGNGDY
VHVPEGHRLLGVGGGPRLVACRAGDLCLWDSRTVHCNQPGAA
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mRNA from alignment at H-akashiwo_Contig1241:252826..254033+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1241.6.2 ID=mRNA_H-akashiwo_Contig1241.6.2|Name=mRNA_H-akashiwo_Contig1241.6.2|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1208bp|location=Sequence derived from alignment at H-akashiwo_Contig1241:252826..254033+ (Heterosigma akashiwo CCMP452)
ATGATCCCTAGATTCGAATGCTCAGAAACAGGACTTCGGGACGGGAAAGC CTATCTTGAAGAATATGGCTATGCTGTATTCAAGGAGGTTATCAGTAAGG ACGACATCGAGGACGCAAAGAATTTATTCTGGGATTTCATAGGTACGGAA ACATTTGCTTCACGCTTGCAAGGTCAAAAATAAAGAAACATAAGGCATAT ATTGTGCTATGACCATATATTGGACTAAATCGCGTAATCATATCTCCCTT TAGCTGGCTATGGTTTTGCTCACACGCCACCATCTCTCTCAGAGGGTATT CCTAACAGGCTGGAACTGGACTTGGAAGGAAGACAGTGGCCTTGCCGGGA AGACAGTAAGACTTGGGAAAATCAGTGCTGGCCAGGAGATCCCAGGACCG GTATTTTTGCAGCGTAAGCAGACTTCAATAACAGCAACGAAGAACTTGTG TATGCGAAACATATCATTTATTATTGTAATTCATAATAGAAGAGCAATAC TTAAATTATCTAGCCTGTGCCTGTGATTTCAGGTATGGTGCTGGCCAGTC TCCGTTCAGCTGGTTTTTGCGAACCCGGCCCAAAGTCAAAGAAGTGTTTG CCTCAATCTGGGAGACAGATGATTTGGTGACAAGCTTTGATGGCTTCAAT GCCTTCCGGCCATGGTACGACAATGAAAAATGGAAAACTGAAGGAGGCTG GTTCCATCTAGACCAAAACCCAGCACTAAAACCAGGTAAACAGCATCTAG TATAATGGTAGGGATGTGTTTGTTTGCAAACACAGCAAAAAAAAAAGAAA CGTGCATGTAGGAATCAAGCACTTTTATTTGTGACACTCGGTCCACCGAC GACACACCAAAGTGACCGGTGCTATAGTAACTCACAACCCTGCGCCTTTG TCGTCCACCGCCAACCAGACAAGGAGTGCATCCAGGGGCTGGTCTCCCTG TACGACACCACGGCGGGCACGGGGGGGCTGACGGTCGTGCCGGGCTCCCA CACCGCTTTCAGAGAGGTCTGGGGCGCCGAGGAGCTGGAGCGGCTGCGGG GgctCAAGCGGCTCGGCGGCAACGGTGACTATGTGCATGTCCCCGAGGGC CACCGACTGCTGGGGGTGGGGGGCGGGCCGCGGCTGGTGGCCTGCCGGGC GGGGGACCtCTGCTTGTGGGACAGCCGCACGGTGCACTGCAACCAGCCGG GCGCCGCC
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1241:252826..254033+

>mRNA_H-akashiwo_Contig1241.6.2 ID=mRNA_H-akashiwo_Contig1241.6.2|Name=mRNA_H-akashiwo_Contig1241.6.2|organism=Heterosigma akashiwo CCMP452|type=CDS|length=726bp|location=Sequence derived from alignment at H-akashiwo_Contig1241:252826..254033+ (Heterosigma akashiwo CCMP452)
ATGATCCCTAGATTCGAATGCTCAGAAACAGGACTTCGGGACGGGAAAGC
CTATCTTGAAGAATATGGCTATGCTGTATTCAAGGAGGTTATCAGTAAGG
ACGACATCGAGGACGCAAAGAATTTATTCTGGGATTTCATAGGTACGGAA
ACATTTGCTTCACGCTTGCAAGACAGTAAGACTTGGGAAAATCAGTGCTG
GCCAGGAGATCCCAGGACCGGTATTTTTGCAGCGTATGGTGCTGGCCAGT
CTCCGTTCAGCTGGTTTTTGCGAACCCGGCCCAAAGTCAAAGAAGTGTTT
GCCTCAATCTGGGAGACAGATGATTTGGTGACAAGCTTTGATGGCTTCAA
TGCCTTCCGGCCATGGTACGACAATGAAAAATGGAAAACTGAAGGAGGCT
GGTTCCATCTAGACCAAAACCCAGCACTAAAACCAGACAAGGAGTGCATC
CAGGGGCTGGTCTCCCTGTACGACACCACGGCGGGCACGGGGGGGCTGAC
GGTCGTGCCGGGCTCCCACACCGCTTTCAGAGAGGTCTGGGGCGCCGAGG
AGCTGGAGCGGCTGCGGGGgctCAAGCGGCTCGGCGGCAACGGTGACTAT
GTGCATGTCCCCGAGGGCCACCGACTGCTGGGGGTGGGGGGCGGGCCGCG
GCTGGTGGCCTGCCGGGCGGGGGACCtCTGCTTGTGGGACAGCCGCACGG
TGCACTGCAACCAGCCGGGCGCCGCC
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