mRNA_H-akashiwo_Contig1241.6.2 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1241.6.2 vs. uniprot
Match: A0A7S3URR7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3URR7_HETAK) HSP 1 Score: 275 bits (703), Expect = 1.330e-88 Identity = 138/261 (52.87%), Postives = 167/261 (63.98%), Query Frame = 1
Query: 4 IPRFECSETGLRDGKAYLEEYGYAVFKEVISKDDIEDAKNLFWDFI-------GTETFA---------SRLQDSKTWENQCWPGDPRTGIFAAYGAGQSPFSWFLRTRPKVKEVFASIWETDDLVTSFDGFNAFRPWYDNEKWKTEGGWFHLDQNPALKPDKECIQGLVSLYDTTAGTGGLTVVPGSHTAF--REVWGAEELERLRGLKRLGGNGDYVHVPEGHRLLGVGGG----PRLVACRAGDLCLWDSRTVHCNQPG 720
P F+CS+ GL GKAYLE++GYAVF V+SK++IE A+ LFWD+I G + A R + TW+ + WP DP+TGI YGAGQSPFSW++RTRPKVK VF++IWETDDL+TSFDGFN FRPW + +W+T+ W+HLDQN KP EC QGLV+L T TGGL VVPGSH F WG EL + R D++ +P GH L PRLV C AGDLCLWDSRTVHCN PG
Sbjct: 54 FPSFDCSKPGLHAGKAYLEQHGYAVFTNVLSKEEIEKAEELFWDYIEGIPERMGMDLKALQEYLQGGWPRRGEPSTWDTKFWPADPKTGIIWRYGAGQSPFSWYIRTRPKVKAVFSAIWETDDLLTSFDGFNVFRPWQNKPEWRTQPSWYHLDQNAVTKPGFECAQGLVALTAATGATGGLAVVPGSHRRFAAHSAWG--ELAARQKNHR-----DFLVLPPGHPALDPAHKDYVRPRLVTCGAGDLCLWDSRTVHCNVPG 307
BLAST of mRNA_H-akashiwo_Contig1241.6.2 vs. uniprot
Match: A0A0G4FG15_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FG15_9ALVE) HSP 1 Score: 238 bits (607), Expect = 1.410e-74 Identity = 110/191 (57.59%), Postives = 135/191 (70.68%), Query Frame = 1
Query: 148 ETFASRLQDSKTWENQCWPGDPRTGIFAAYGAGQSPFSWFLRTRPKVKEVFASIWETDDLVTSFDGFNAFRPWYDNEKWKTEGGWFHLDQNPALKPDKECIQGLVSLYDTTAGTGGLTVVPGSHTAFREVWGAEELERLRGLKRLGGNGDYVHVPEGHRLLGVGGGPRLVACRAGDLCLWDSRTVHCNQPG 720
E A R +TWE + WPG TGI ++GAGQSPF WF+RTRP+V++VF+++WETDDL+ SFDGF AFRPW N KWKT+GGW+H+DQNP KPD+ C+QGLVSLYD T+ GGLTV+PGSH F +R + RL G D+V VP ++ GG RLV C+AGDL LWDSRTVHCN PG
Sbjct: 18 EVSAPRRHSPETWEGRSWPGGAETGIINSWGAGQSPFQWFVRTRPQVRDVFSALWETDDLLCSFDGFGAFRPWRLNPKWKTQGGWWHVDQNPISKPDRVCVQGLVSLYDGTSSVGGLTVIPGSHKEFCAFG-----KRAQKEGRLMGKTDFVPVPHEDPIMSPGG--RLVLCKAGDLLLWDSRTVHCNTPG 201
BLAST of mRNA_H-akashiwo_Contig1241.6.2 vs. uniprot
Match: A0A7S3Z931_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z931_9EUKA) HSP 1 Score: 234 bits (597), Expect = 2.040e-72 Identity = 113/244 (46.31%), Postives = 158/244 (64.75%), Query Frame = 1
Query: 25 ETGLRDGKAYLEEYGYAVFKEVISKDDIEDAKNLFWDFIGTETFASRLQ-------------DSKTWENQCWPGDPRTGIFAAYGAGQSPFSWFLRTRPKVKEVFASIWETDDLVTSFDGFNAFRPWYDNEKWKTEGGWFHLDQNPALKPDKECIQGLVSLYDTTAGTGGLTVVPGSHTAFREVWGAEELERLRGLKRLGGNGDYVHVPEGHRLLGVGGGPRLVACRAGDLCLWDSRTVHCNQP 717
E G DG YLE+ GY V K V+ + +++ A++LFW+++ E +RL+ D+ TW+ +PG+P GI A GAGQSPFSWF+R+R +VK+VF ++W TDDL+ SFDGF +FRPW + W+T GGWFH+DQNP KP C+QGLVS+YD TGGLTV+PGS + F E+ ++ + L R+G D++ +P +L +LV+C+AGDLCLWDSR +HCN P
Sbjct: 82 EKGRADGLKYLEKNGYVVAKAVLDQKEVKKARSLFWEWV--EELPNRLEVDAEKAKAWPKRGDASTWDKN-FPGNPDNGIIANMGAGQSPFSWFVRSRARVKQVFEAVWATDDLLVSFDGFGSFRPWSYDPSWRTRGGWFHVDQNPIKKPGLHCVQGLVSMYDQDKATGGLTVIPGSQSHFPEL-----AKKYQSLCRMGL--DFIPIPRADSVLKKK--IKLVSCKAGDLCLWDSRVIHCNTP 313
BLAST of mRNA_H-akashiwo_Contig1241.6.2 vs. uniprot
Match: A0A819BS32_9BILA (Hypothetical protein n=3 Tax=unclassified Rotaria TaxID=2631648 RepID=A0A819BS32_9BILA) HSP 1 Score: 221 bits (563), Expect = 9.940e-69 Identity = 108/242 (44.63%), Postives = 149/242 (61.57%), Query Frame = 1
Query: 1 MIPRFECS-ETGLRDGKAYLEEYGYAVFKEVISKDDIEDAKNLFWDFIGTETFAS-RLQDSKTWENQCWPGDPRTGIFAAYGAGQSPFSWFLRTRPKVKEVFASIWETDDLVTSFDGFNAFRPWYDNEKWKTEGGWFHLDQNPALKPDKECIQGLVSLYDTTAGTGGLTVVPGSHTAFREVWGAEELERLRGLKRLGGNGDYVHVPEGHRLL-GVGGGPRLVACRAGDLCLWDSRTVHCNQP 717
+ PR+ + + L +G AYL E+GY VF +++S+++I+ K+L W+F R DS+TW N WPG P +G+ G GQS F W +R+ KVK VF IW T++L+ SFDG FR W+ + KWKT GGW+H+DQNP KPD+ C+QGLVSL TGGL ++P +H F E+ ++ R G GD++ +P HR+L G +LV C+AGDL LWDSR VHCN P
Sbjct: 20 LTPRYSVTNDESLNEGIAYLNEHGYTVFSDILSQEEIKTNKDLLWNFFENIPGCHIRRNDSETWSN-FWPGFPTSGVVNNCGIGQSDFMWNIRSNRKVKRVFTRIWNTNELLVSFDGCGVFRNWHYDPKWKTNGGWYHVDQNPIEKPDRCCVQGLVSLMKQNETTGGLIIIPNTHLRFAEL---NDIPR--------GRGDFIRIPHNHRILDGDQAIAKLVQCQAGDLVLWDSRLVHCNAP 249
BLAST of mRNA_H-akashiwo_Contig1241.6.2 vs. uniprot
Match: A0A820ZNA0_9BILA (Hypothetical protein n=2 Tax=unclassified Rotaria TaxID=2631648 RepID=A0A820ZNA0_9BILA) HSP 1 Score: 219 bits (557), Expect = 3.560e-67 Identity = 107/242 (44.21%), Postives = 149/242 (61.57%), Query Frame = 1
Query: 1 MIPRFECS-ETGLRDGKAYLEEYGYAVFKEVISKDDIEDAKNLFWDFIGTETFAS-RLQDSKTWENQCWPGDPRTGIFAAYGAGQSPFSWFLRTRPKVKEVFASIWETDDLVTSFDGFNAFRPWYDNEKWKTEGGWFHLDQNPALKPDKECIQGLVSLYDTTAGTGGLTVVPGSHTAFREVWGAEELERLRGLKRLGGNGDYVHVPEGHRLL-GVGGGPRLVACRAGDLCLWDSRTVHCNQP 717
+ PR+ + + GL +G AYL E+GY VF +++S+++I+ K+L W+F R D +TW + WPG P +G+ G GQS F W +R+ KVK VF IW T++L+ SFDG FR W+ + KWKT GGW+H+DQNP KPD+ C+QGLVSL + TGGL ++P +H F E+ +L R G D++ +P HR+L G +LV C+AGDL LWDSR VHCN P
Sbjct: 20 LTPRYSVTNDEGLNEGIAYLNEHGYTVFSDILSQEEIKTNKDLLWNFFENIPGCHIRRNDPETWSS-FWPGFPTSGVVNNCGIGQSDFMWNIRSNRKVKRVFTRIWNTNELLVSFDGCGVFRNWHYDPKWKTNGGWYHVDQNPIEKPDRCCVQGLVSLMNQNETTGGLIIIPNTHLRFAEL---NDLPR--------GRSDFIRIPRNHRILDGDQAIAKLVQCQAGDLVLWDSRLVHCNAP 249
BLAST of mRNA_H-akashiwo_Contig1241.6.2 vs. uniprot
Match: A0A817X5Y8_9BILA (Hypothetical protein n=2 Tax=Rotaria TaxID=231623 RepID=A0A817X5Y8_9BILA) HSP 1 Score: 219 bits (559), Expect = 7.940e-67 Identity = 106/230 (46.09%), Postives = 145/230 (63.04%), Query Frame = 1
Query: 34 LRDGKAYLEEYGYAVFKEVISKDDIEDAKNLFWDFIGT--ETFASRLQDSKTWENQCWPGDPRTGIFAAYGAGQSPFSWFLRTRPKVKEVFASIWETDDLVTSFDGFNAFRPWYDNEKWKTEGGWFHLDQNPALKPDKECIQGLVSLYDTTAGTGGLTVVPGSHTAFREVWGAEELERLRGLKRLGGNGDYVHVPEGHRLLGVGGGPRLVACRAGDLCLWDSRTVHCNQP 717
L+ G +L EYGYAVF V++ + ++ + NLFW+++ E + + +S+TW+ WPG P G+ +G GQS F WF+R P VK+VF+ IW +D+L SFDG FR W+ N++WKT GGW+H DQNP KP++ IQGLV+L D TG L VVPGSH F E+ A + +R+ G DY+ VP+ H + PRLV C+AGDL +WDSR VHCN P
Sbjct: 44 LQGGIEHLNEYGYAVFSNVLNNEQVDLSVNLFWNYLENLEEPYRIQRNNSQTWDKP-WPGAPHIGLVNRHGIGQSEFMWFIRGNPNVKKVFSHIWNSDELCVSFDGAGCFRNWHLNKEWKTSGGWYHCDQNPFKKPNRCSIQGLVALTDNNESTGSLVVVPGSHEHFLELPSAAQKKRIWG--------DYMAVPQQHSIFEKLR-PRLVKCKAGDLVVWDSRCVHCNTP 263
BLAST of mRNA_H-akashiwo_Contig1241.6.2 vs. uniprot
Match: A0A815B8C6_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A815B8C6_9BILA) HSP 1 Score: 211 bits (538), Expect = 4.750e-64 Identity = 109/243 (44.86%), Postives = 138/243 (56.79%), Query Frame = 1
Query: 7 PRFECS-ETGLRDGKAYLEEYGYAVFKEVISKDDIEDAKNLFWDFI-GTETFASRLQDSKTWENQCWPGDPRTGIFAAYGAGQSPFSWFLRTRPKVKEVFASIWETDDLVTSFDGFNAFRPWYDNEKWKTEGGWFHLDQNPALKPDKECIQGLVSLYDTTAGTGGLTVVPGSHTAFREVWGAEELERLRGLKRLGGNGDYVHVPEGHRLLGVGGG-PRLVACRAGDLCLWDSRTVHCNQPGAA 726
PRF + + L+DG YL E GY V +V+++D+I + K L W FI A + D TW NQ WP G+ A +G GQS F W +R+ P+VK VFA +W T L+ SFDG FR W N WKT GGW H+DQNP KPD+ CIQG+VSL D +GGL V P +H F E+ E + D+V VP H ++ G +LV CRAGDL LWDSR +HCN P A
Sbjct: 13 PRFSVTNDKELQDGFTYLNENGYVVISDVLNQDEINENKQLLWKFIENASKGAIKRDDPDTWSNQ-WPSFSSHGLIATFGIGQSDFLWSVRSHPQVKNVFARLWNTRQLLVSFDGCGVFRDWRYNPMWKTSGGWEHVDQNPKKKPDRCCIQGIVSLTDQNERSGGLIVYPHTHLRFTELCDITE-----------NSNDFVKVPSNHSIMNHGQTLGKLVHCRAGDLILWDSRLIHCNSPATA 243
BLAST of mRNA_H-akashiwo_Contig1241.6.2 vs. uniprot
Match: A0A821TXY1_9BILA (Hypothetical protein n=4 Tax=unclassified Rotaria TaxID=2631648 RepID=A0A821TXY1_9BILA) HSP 1 Score: 209 bits (532), Expect = 4.500e-63 Identity = 105/240 (43.75%), Postives = 143/240 (59.58%), Query Frame = 1
Query: 7 PRFECSET-GLRDGKAYLEEYGYAVFKEVISKDDIEDAKNLFWDFIGTETFAS-RLQDSKTWENQCWPGDPRTGIFAAYGAGQSPFSWFLRTRPKVKEVFASIWETDDLVTSFDGFNAFRPWYDNEKWKTEGGWFHLDQNPALKPDKECIQGLVSLYDTTAGTGGLTVVPGSHTAFREVWGAEELERLRGLKRLGGNGDYVHVPEGHRLLGVGGG-PRLVACRAGDLCLWDSRTVHCNQP 717
PRF + + DG YL E+GYAVF +V+S+D+I K+L W F T R D TW N WPG P G+ G GQS F W +R+ +K +++ IW T++L+ SFDG FR W + KWKT+GGW+H+DQNP LKP++ CIQG VSL + TGGL VVP +H F ++ E +R + D++ +P H++L G +L+ C+AGDL LWDSR VHCN P
Sbjct: 21 PRFSVTNNESINDGVNYLNEHGYAVFSDVLSQDEININKDLLWKFFETIPGCHIRRDDPSTWSNY-WPGFPSHGVVNNCGIGQSDFMWNIRSNRNMKHIYSQIWNTNELLVSFDGCGVFRDWRYDSKWKTKGGWYHVDQNPVLKPNRCCIQGFVSLTNQNETTGGLIVVPNTHLRFAQL--TELGQRPK---------DFIMIPRDHQILDRGHAIGKLIQCQAGDLVLWDSRLVHCNSP 248
BLAST of mRNA_H-akashiwo_Contig1241.6.2 vs. uniprot
Match: A0A816XF01_9BILA (Hypothetical protein n=7 Tax=Rotaria TaxID=231623 RepID=A0A816XF01_9BILA) HSP 1 Score: 208 bits (530), Expect = 9.240e-63 Identity = 111/243 (45.68%), Postives = 138/243 (56.79%), Query Frame = 1
Query: 1 MIPRFECSET-GLRDGKAYLEEYGYAVFKEVISKDDIEDAKNLFWDFIGTETFASRLQ--DSKTWENQCWPGDPRTGIFAAYGAGQSPFSWFLRTRPKVKEVFASIWETDDLVTSFDGFNAFRPWYDNEKWKTEGGWFHLDQNPALKPDKECIQGLVSLYDTTAGTGGLTVVPGSHTAFREVWGAEELERLRGLKRLGGNGDYVHVPEGHRLLGVGGG-PRLVACRAGDLCLWDSRTVHCNQP 717
+ PRF + L DG AYL +GYAVF +V+S+D+I + W F R+Q D TW N WPG G+ G GQS F W +R+ P VK VF+ IW T+ L+ SFDG FR W + +WKT+GGWFH+DQNP KPD+ CIQG VSL + TGG +P SH F E L L R G D+V +P HR+L G +LV C+AGDL LWDSR VHCN P
Sbjct: 20 LTPRFSIVDNESLNDGIAYLNNHGYAVFSDVLSQDEISTNIDSLWQFFENIP-GCRIQRRDPSTWSNY-WPGFTTHGVVNNCGIGQSDFMWNIRSNPNVKRVFSQIWNTNQLLVSFDGCGIFRDWRYDARWKTKGGWFHVDQNPVSKPDRCCIQGFVSLTNQNENTGGFIAIPNSHLRFAE---------LATLAR--GTRDFVMIPRDHRILDNGRAIGKLVQCQAGDLVLWDSRLVHCNSP 249
BLAST of mRNA_H-akashiwo_Contig1241.6.2 vs. uniprot
Match: A0A815BG76_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A815BG76_9BILA) HSP 1 Score: 209 bits (531), Expect = 1.200e-62 Identity = 104/244 (42.62%), Postives = 144/244 (59.02%), Query Frame = 1
Query: 7 PRFEC-SETGLRDGKAYLEEYGYAVFKEVISKDDIEDAKNLFWDFIGTETFASRLQDSK-TWENQCWPGDPRTGIFAAYGAGQSPFSWFLRTRPKVKEVFASIWETDDLVTSFDGFNAFRPWYDNEKWKTEGGWFHLDQNPALKPDKECIQGLVSLYDTTAGTGGLTVVPGSHTAFREVWGAEELERLRGLKRLGGNGDYVHVPEGHRLLGVGGGP-----RLVACRAGDLCLWDSRTVHCNQP 717
PRF S L++G YL E GYAVF +V+++++++ KNLFWDF+ +D TW+N WP P +G+ + +G GQS F W +R VK++F++IW+TD+L+ SFDG FR W N+ WKTEGGW H+DQ+P KP+K CIQGLV++ D TGGL V P S F LE + D+V +P H++L +LV C+AGDL +WDSR +HCN P
Sbjct: 32 PRFSVNSAISLQEGLEYLNENGYAVFSDVLTEEEVKTNKNLFWDFLEQAAHNQIDRDKHDTWDNH-WPARPLSGVISQHGIGQSKFLWNVRNNRNVKKIFSNIWQTDELLVSFDGAGCFRDWSFNQSWKTEGGWIHVDQHPVRKPNKCCIQGLVAITDNDEFTGGLVVYPKSQKRF--------LELTNLITPTHSGRDFVKIPPTHQILRQSESSELIKFKLVKCKAGDLVVWDSRVIHCNTP 266 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1241.6.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1241.6.2 >prot_H-akashiwo_Contig1241.6.2 ID=prot_H-akashiwo_Contig1241.6.2|Name=mRNA_H-akashiwo_Contig1241.6.2|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=242bp MIPRFECSETGLRDGKAYLEEYGYAVFKEVISKDDIEDAKNLFWDFIGTEback to top mRNA from alignment at H-akashiwo_Contig1241:252826..254033+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1241.6.2 ID=mRNA_H-akashiwo_Contig1241.6.2|Name=mRNA_H-akashiwo_Contig1241.6.2|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1208bp|location=Sequence derived from alignment at H-akashiwo_Contig1241:252826..254033+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1241:252826..254033+ >mRNA_H-akashiwo_Contig1241.6.2 ID=mRNA_H-akashiwo_Contig1241.6.2|Name=mRNA_H-akashiwo_Contig1241.6.2|organism=Heterosigma akashiwo CCMP452|type=CDS|length=726bp|location=Sequence derived from alignment at H-akashiwo_Contig1241:252826..254033+ (Heterosigma akashiwo CCMP452)back to top |