mRNA_H-akashiwo_Contig1240.3.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1240.3.1
Unique NamemRNA_H-akashiwo_Contig1240.3.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1240.3.1 vs. uniprot
Match: A0A1Q7BD74_9ARCH (Methyltransf_21 domain-containing protein n=1 Tax=archaeon 13_2_20CM_2_52_21 TaxID=1805019 RepID=A0A1Q7BD74_9ARCH)

HSP 1 Score: 70.5 bits (171), Expect = 1.880e-11
Identity = 58/184 (31.52%), Postives = 93/184 (50.54%), Query Frame = 1
Query:   16 TFFDVGSNVGNFTMSLLGILCKNKNQHSIHAFEPVPGTLSEMVRRLEHEFPSNSLLNGTRLFLQNTALSNSNGSTKMYVPLEASHKQDAENVASSSQRQRPQKFDAQLASFTPLAGYHHSDLSHSNLILEVETLTLDSYCNENVIPQITLLKIDCEGADPLVLEGAYSMLEQNRIEVLIFEYNS 567
            +F+DVG+NVG +++ L        N H ++A EPVP  +  + R L   F  N       + +   ALS+ NG T  YV   +  K    N ++SS  +   KF+++ +   P       D ++S L +   T+T DS  +E   P + L+KID EGA+ LVLEGA   L   ++  ++ E ++
Sbjct:   25 SFYDVGANVGYYSLFL------RHNFHRVYAVEPVPRNVRRLKRSLSIRFVRN-------VTVIPIALSDKNGETTFYV--NSDQKNIFNNFSASSLFE---KFESRSSDGGP-------DRTYSGLQITTRTMTFDSLLSE---PFVDLVKIDVEGAEFLVLEGAKESLAHGKVRNVLVELHN 180          
BLAST of mRNA_H-akashiwo_Contig1240.3.1 vs. uniprot
Match: A0A553CK93_9FLAO (FkbM family methyltransferase n=1 Tax=Flavobacterium franklandianum TaxID=2594430 RepID=A0A553CK93_9FLAO)

HSP 1 Score: 67.0 bits (162), Expect = 6.970e-10
Identity = 57/192 (29.69%), Postives = 83/192 (43.23%), Query Frame = 1
Query:    1 EDNSLTFFDVGSNVGNFTMSLLGILCKNKNQHS-IHAFEPVPGTLSEMVRRLEHEFPSNSLLNGTRLFLQNTALSNSNGSTKMYVPLEASHKQDAENVASSSQRQRPQKFDAQLASFTPLAGYHHSDLSHSNLIL----EVETLTLDSYCNENVIPQITLLKIDCEGADPLVLEGAYSMLEQNRIEVLIFEY 561
            + N L  FDVGSN+G +T+ L  +     ++HS I +FEP   T +++     H   +N         L N    NSN    +Y   E S                             LA  +   L H N+ +    E+E  T+DS+C EN I  I  LK+D EG +  VL GA  ML  ++I+ + FE+
Sbjct:   69 KSNQLVIFDVGSNIGLYTILLNEVF----SEHSKILSFEPSKKTFNKLSINTSHIKKTN---------LYNFGFGNSNTFLTLYYNQEESG----------------------------LASVYERRLDHFNIKMDLKEEIEIKTIDSFCEENNIVHINFLKLDVEGHELSVLNGAVKMLNSHKIDFIQFEF 219          
BLAST of mRNA_H-akashiwo_Contig1240.3.1 vs. uniprot
Match: A0A6C0KCE9_9ZZZZ (Methyltransf_21 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0KCE9_9ZZZZ)

HSP 1 Score: 63.2 bits (152), Expect = 9.560e-9
Identity = 30/53 (56.60%), Postives = 38/53 (71.70%), Query Frame = 1
Query:  400 LEVETLTLDSYCNENVIPQITLLKIDCEGADPLVLEGAYSMLEQNRIEVLIFE 558
            L V+  TLDSYC EN I QI  +KID EGA+  VLEGA  +L++NRI+  +FE
Sbjct:  127 LNVKCQTLDSYCEENAIEQIDFIKIDVEGAEKTVLEGAKRLLQENRIKAGVFE 179          
BLAST of mRNA_H-akashiwo_Contig1240.3.1 vs. uniprot
Match: A0A6L9ZQZ4_9CYAN (FkbM family methyltransferase n=1 Tax=Okeania sp. SIO3B5 TaxID=2607811 RepID=A0A6L9ZQZ4_9CYAN)

HSP 1 Score: 64.3 bits (155), Expect = 1.440e-8
Identity = 50/183 (27.32%), Postives = 90/183 (49.18%), Query Frame = 1
Query:   13 LTFFDVGSNVGNFTMSLLGILCKNKNQHSIHAFEPVPGTLSEMVRRLEHEFPSNSLLNGTRLFLQNTALSNSNGSTKMYVPLEASHKQDAENVASSSQRQRPQKFDAQL-ASFTPLAGYHHSDLSHSNLILEVETLTLDSYCNENVIPQITLLKIDCEGADPLVLEGAYSMLEQNRIEVLIFE 558
            +T FD+G+N+G++++    ++ ++     +++FEP   T  ++++RL+    SN       +F +N  L                  +  +  +S +   RPQ  D    A++ P+    ++++        VE + LD++C  N I  I  LKID EGA+  VLEGA S+L++  I  L FE
Sbjct:   28 MTVFDIGANIGHYSILFSQLVGQSGK---VYSFEPTSSTFKKLLKRLKEHQCSNVFPFQKAIFSENKLLE---------------FNEFPDEYSSWNSIGRPQMNDPNSPANYVPIV---NTEI--------VEAVRLDTFCEANNIKNIDYLKIDVEGAESYVLEGAISLLKRKAISFLQFE 181          
BLAST of mRNA_H-akashiwo_Contig1240.3.1 vs. uniprot
Match: A0A835SMS5_CHLIN (Methyltransf_21 domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835SMS5_CHLIN)

HSP 1 Score: 63.9 bits (154), Expect = 1.660e-8
Identity = 28/59 (47.46%), Postives = 40/59 (67.80%), Query Frame = 1
Query:  397 ILEVETLTLDSYCNENVIPQITLLKIDCEGADPLVLEGAYSMLEQNRIEVLIFEYNSVW 573
            + +V   T+D Y  ++ I  I +LKID EG DP VL GA+  L + R+EVL+FEY+S+W
Sbjct:  355 LFDVNVTTVDEYVRQSGISHIDVLKIDTEGFDPAVLAGAHETLRKRRVEVLLFEYHSLW 413          
BLAST of mRNA_H-akashiwo_Contig1240.3.1 vs. uniprot
Match: A0A6C0LPJ0_9ZZZZ (Methyltransf_21 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0LPJ0_9ZZZZ)

HSP 1 Score: 61.6 bits (148), Expect = 3.430e-8
Identity = 30/60 (50.00%), Postives = 40/60 (66.67%), Query Frame = 1
Query:  379 LSHSNLILEVETLTLDSYCNENVIPQITLLKIDCEGADPLVLEGAYSMLEQNRIEVLIFE 558
            L+    +L V+  TLDSYC+EN I QI  +KID EGA+  VLEGA  +L+  RI+  +FE
Sbjct:  120 LNQDITVLNVKCQTLDSYCSENSIQQIDFIKIDVEGAEKTVLEGAKGLLQSKRIKAGVFE 179          
BLAST of mRNA_H-akashiwo_Contig1240.3.1 vs. uniprot
Match: A0A7C8EQ27_9BACT (FkbM family methyltransferase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C8EQ27_9BACT)

HSP 1 Score: 63.2 bits (152), Expect = 3.620e-8
Identity = 46/158 (29.11%), Postives = 78/158 (49.37%), Query Frame = 1
Query:  100 IHAFEPVPGTLSEMVRRLEHEFPSNSLLNGTRLFLQNTALSNSNGSTKMYVPLEASHKQDAENVASSSQRQRPQKFDAQLASFTPLAGYHHSDLSHSNLILEVETLTLDSYCNENVIPQITLLKIDCEGADPLVLEGAYSMLEQNRIEVLIFEYNSVW 573
            ++AFEPV  T + +          N+ L+ +    QN A+S  NGS   Y      + Q+ ++   SS  +R    + Q     P+              + V+  TLDS+C EN +P++  +KID EGA+  VL+GA ++L + +I+++ FEY   +
Sbjct:  441 LYAFEPVADTFNRL----------NNNLDSSNAQPQNIAISVDNGSKTFYY-----YDQNTKSARMSSFYRRNPDVEDQF-DMEPVP-------------ISVQARTLDSFCEENSVPRVDFVKIDTEGAELDVLQGAANLLRRQKIKIIQFEYGGTY 569          
BLAST of mRNA_H-akashiwo_Contig1240.3.1 vs. uniprot
Match: A0A4Y6PUJ8_9DELT (FkbM family methyltransferase n=2 Tax=Persicimonas caeni TaxID=2292766 RepID=A0A4Y6PUJ8_9DELT)

HSP 1 Score: 62.0 bits (149), Expect = 6.350e-8
Identity = 30/56 (53.57%), Postives = 35/56 (62.50%), Query Frame = 1
Query:  406 VETLTLDSYCNENVIPQITLLKIDCEGADPLVLEGAYSMLEQNRIEVLIFEYNSVW 573
            VE  TLD YC    I  I  LKID EG D  VLEGA  +LEQ R++V +FE+ S W
Sbjct:  247 VEVTTLDRYCERQGIEHINFLKIDAEGFDLHVLEGATEILEQERVDVFMFEFGSGW 302          
BLAST of mRNA_H-akashiwo_Contig1240.3.1 vs. uniprot
Match: A0A8J7BAY7_9CYAN (FkbM family methyltransferase n=2 Tax=Trichocoleus sp. FACHB-591 TaxID=2692872 RepID=A0A8J7BAY7_9CYAN)

HSP 1 Score: 62.4 bits (150), Expect = 6.500e-8
Identity = 45/187 (24.06%), Postives = 86/187 (45.99%), Query Frame = 1
Query:   13 LTFFDVGSNVGNFTMSLLGILCKNKNQHSIHAFEPVPGTLSEMVRRLEHEFPSNSLLNGTRLFLQNTALSNSNGSTKMYVPLEASHKQDAENVASSSQRQRPQKFDA-----QLASFTPLAGYHHSDLSHSNLILEVETLTLDSYCNENVIPQITLLKIDCEGADPLVLEGAYSMLEQNRIEVLIFE 558
            +T FD+G+NVG++++ L  ++    +   ++AFEP   T  ++ +R+      N  +  T +F +NT++                              + P+++ A     + +   P  G  +  +  + +   VE +TLDS+C +  I +I  LK+D EGA+  V +GA  +L +  I  + FE
Sbjct:  258 MTVFDIGANVGDYSLLLSELV---GHSGKVYAFEPTSNTFQKLQQRVSQHSLENITILKTAVFCRNTSI---------------------------ELNEFPEEYSAWNSIGKPSMLNPKNGIDYVPIVATEM---VEAITLDSFCQKQSIEKIDYLKVDVEGAESNVFQGAQDLLRKQAIHFIQFE 411          
BLAST of mRNA_H-akashiwo_Contig1240.3.1 vs. uniprot
Match: A0A8J6X3C0_DESMC (FkbM family methyltransferase n=1 Tax=Nostoc muscorum FACHB-395 TaxID=2692907 RepID=A0A8J6X3C0_DESMC)

HSP 1 Score: 62.4 bits (150), Expect = 6.500e-8
Identity = 53/183 (28.96%), Postives = 94/183 (51.37%), Query Frame = 1
Query:   13 LTFFDVGSNVGNFTMSLLGILCKNKNQHSIHAFEPVPGTLSEMVRRLEHEFPSNSLLNGTRLFLQNTALSNSNGSTKMYVPLEASHKQDAENVASSSQRQRPQKFDAQ-LASFTPLAGYHHSDLSHSNLILEVETLTLDSYCNENVIPQITLLKIDCEGADPLVLEGAYSMLEQNRIEVLIFE 558
            +T FDVG+NVG++++ L  ++  +     +++FEP   T +++  RL     +N  L      LQ    S++         ++ +  + +E+ ++ +   RPQ  D Q    + P+    ++++        VET+TLDS+C  N I +I  LKID EGA+  VL+GA  +L +  I  + FE
Sbjct:  254 MTVFDVGANVGDYSILLSKLVGIDG---IVYSFEPTLSTFNKLKERLSKSKCNNVCL------LQQAVYSDN---------IQIAFNEFSEDFSAWNSIGRPQMLDPQGSGQYVPIV---NTEI--------VETITLDSFCKNNDIKKIDYLKIDVEGAEIDVLQGATKLLREKDIYFIQFE 407          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1240.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Q7BD74_9ARCH1.880e-1131.52Methyltransf_21 domain-containing protein n=1 Tax=... [more]
A0A553CK93_9FLAO6.970e-1029.69FkbM family methyltransferase n=1 Tax=Flavobacteri... [more]
A0A6C0KCE9_9ZZZZ9.560e-956.60Methyltransf_21 domain-containing protein n=1 Tax=... [more]
A0A6L9ZQZ4_9CYAN1.440e-827.32FkbM family methyltransferase n=1 Tax=Okeania sp. ... [more]
A0A835SMS5_CHLIN1.660e-847.46Methyltransf_21 domain-containing protein n=1 Tax=... [more]
A0A6C0LPJ0_9ZZZZ3.430e-850.00Methyltransf_21 domain-containing protein n=1 Tax=... [more]
A0A7C8EQ27_9BACT3.620e-829.11FkbM family methyltransferase n=1 Tax=Planctomycet... [more]
A0A4Y6PUJ8_9DELT6.350e-853.57FkbM family methyltransferase n=2 Tax=Persicimonas... [more]
A0A8J7BAY7_9CYAN6.500e-824.06FkbM family methyltransferase n=2 Tax=Trichocoleus... [more]
A0A8J6X3C0_DESMC6.500e-828.96FkbM family methyltransferase n=1 Tax=Nostoc musco... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1240contigH-akashiwo_Contig1240:225111..225701 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1047013.AQSP01000116_gene1119
PFAMsMethyltransf_21
Model size591
Max annot lvl2|Bacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.04e-13
EggNOG OGsCOG2242@1|root,COG2242@2|Bacteria,2NQ6D@2323|unclassified Bacteria
DescriptionMethyltransferase FkbM domain
Cds size591
COG categoryH
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387129.3606532-CDS-H-akashiwo_Contig1240:225110..2257011681387129.3606532-CDS-H-akashiwo_Contig1240:225110..225701Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1240 225111..225701 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1240.3.1prot_H-akashiwo_Contig1240.3.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1240 225111..225701 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1240.3.1

>prot_H-akashiwo_Contig1240.3.1 ID=prot_H-akashiwo_Contig1240.3.1|Name=mRNA_H-akashiwo_Contig1240.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=197bp
EDNSLTFFDVGSNVGNFTMSLLGILCKNKNQHSIHAFEPVPGTLSEMVRR
LEHEFPSNSLLNGTRLFLQNTALSNSNGSTKMYVPLEASHKQDAENVASS
SQRQRPQKFDAQLASFTPLAGYHHSDLSHSNLILEVETLTLDSYCNENVI
PQITLLKIDCEGADPLVLEGAYSMLEQNRIEVLIFEYNSVWTTLVDI
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mRNA from alignment at H-akashiwo_Contig1240:225111..225701-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1240.3.1 ID=mRNA_H-akashiwo_Contig1240.3.1|Name=mRNA_H-akashiwo_Contig1240.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=591bp|location=Sequence derived from alignment at H-akashiwo_Contig1240:225111..225701- (Heterosigma akashiwo CCMP452)
GAGGATAATTCTTTGACCTTCTTTGATGTCGGTTCAAATGTAGGCAATTT CACCATGAGCCTACTGGGCATCCTTTGTAAAAATAAAAATCAGCACTCAA TACATGCCTTTGAACCGGTTCCTGGCACACTGTCGGAAATGGTAAGAAGG CTTGAACATGAATTTCCGAGCAACAGTTTACTCAATGGAACTCGATTATT CCTGCAGAACACAGCACTCAGTAACAGCAATGGGTCAACAAAAATGTATG TTCCGCTGGAGGCATCGCACAAACAGGATGCTGAAAATGTAGCTTCCTCT TCTCAGAGACAACGACCTCAGAAATTTGATGCACAATTGGCATCATTCAC ACCACTGGCCGGCTACCATCATAGTGACCTTAGCCATTCAAATTTGATTC TGGAAGTTGAAACACTAACACTGGACAGCTACTGTAACGAAAATGTTATC CCACAAATTACTTTGCTTAAGATTGACTGTGAAGGAGCCGACCCACTAGT TCTTGAGGGAGCTTATTCCATGCTAGAACAGAACCGCATTGAAGTGCTAA TTTTTGAATACAATTCTGTATGGACCACACTAGTGGATATA
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1240:225111..225701-

>mRNA_H-akashiwo_Contig1240.3.1 ID=mRNA_H-akashiwo_Contig1240.3.1|Name=mRNA_H-akashiwo_Contig1240.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=591bp|location=Sequence derived from alignment at H-akashiwo_Contig1240:225111..225701- (Heterosigma akashiwo CCMP452)
GAGGATAATTCTTTGACCTTCTTTGATGTCGGTTCAAATGTAGGCAATTT
CACCATGAGCCTACTGGGCATCCTTTGTAAAAATAAAAATCAGCACTCAA
TACATGCCTTTGAACCGGTTCCTGGCACACTGTCGGAAATGGTAAGAAGG
CTTGAACATGAATTTCCGAGCAACAGTTTACTCAATGGAACTCGATTATT
CCTGCAGAACACAGCACTCAGTAACAGCAATGGGTCAACAAAAATGTATG
TTCCGCTGGAGGCATCGCACAAACAGGATGCTGAAAATGTAGCTTCCTCT
TCTCAGAGACAACGACCTCAGAAATTTGATGCACAATTGGCATCATTCAC
ACCACTGGCCGGCTACCATCATAGTGACCTTAGCCATTCAAATTTGATTC
TGGAAGTTGAAACACTAACACTGGACAGCTACTGTAACGAAAATGTTATC
CCACAAATTACTTTGCTTAAGATTGACTGTGAAGGAGCCGACCCACTAGT
TCTTGAGGGAGCTTATTCCATGCTAGAACAGAACCGCATTGAAGTGCTAA
TTTTTGAATACAATTCTGTATGGACCACACTAGTGGATATA
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