mRNA_H-akashiwo_Contig1239.3.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1239.3.1 vs. uniprot
Match: A0A5S6Q4K0_TRIMR (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=1 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6Q4K0_TRIMR) HSP 1 Score: 57.4 bits (137), Expect = 4.070e-8 Identity = 27/59 (45.76%), Postives = 41/59 (69.49%), Query Frame = 3
Query: 6 SGITRLEEESFQRLPVQIAGKVPRGSGEYDFDEDRFFEKGEVSRLSTFMQYALVAADEA 182
SGI +L EE F+++P ++A +VP+G E+ FDE RF + E ++S +ALVAA+EA
Sbjct: 84 SGIGKLTEEEFEKMPARVAAQVPKGKEEFQFDEKRFTD-AEWRQMSKATAFALVAAEEA 141
BLAST of mRNA_H-akashiwo_Contig1239.3.1 vs. uniprot
Match: UPI0015D51AD4 (beta-ketoacyl-ACP synthase II n=1 Tax=Azospirillum oleiclasticum TaxID=2735135 RepID=UPI0015D51AD4) HSP 1 Score: 53.1 bits (126), Expect = 1.270e-6 Identity = 24/59 (40.68%), Postives = 36/59 (61.02%), Query Frame = 3
Query: 6 SGITRLEEESFQRLPVQIAGKVPRGSGEYDFDEDRFFEKGEVSRLSTFMQYALVAADEA 182
SG+ + + LP ++AG+VPRG GE F+ DRF E ++ F+ YA+ AA+EA
Sbjct: 31 SGLGPITKFDVSDLPAKVAGEVPRGDGEGQFNPDRFIAPKEQRKMDEFIVYAIAAAEEA 89
BLAST of mRNA_H-akashiwo_Contig1239.3.1 vs. uniprot
Match: A0A8C5Q373_9ANUR (3-oxoacyl-[acyl-carrier-protein] synthase n=1 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5Q373_9ANUR) HSP 1 Score: 53.1 bits (126), Expect = 1.270e-6 Identity = 22/58 (37.93%), Postives = 39/58 (67.24%), Query Frame = 3
Query: 9 GITRLEEESFQRLPVQIAGKVPRGSGEYDFDEDRFFEKGEVSRLSTFMQYALVAADEA 182
GI L+ + ++ LP ++A +VPRG+G+ +F E+R+ + +V +S+ AL AA+EA
Sbjct: 71 GIDALDSDDYKNLPCRVAARVPRGTGDGEFHEERYVSRSDVKAMSSATVMALGAAEEA 128
BLAST of mRNA_H-akashiwo_Contig1239.3.1 vs. uniprot
Match: A0A8K0CKJ5_9COLE (Uncharacterized protein n=1 Tax=Ignelater luminosus TaxID=2038154 RepID=A0A8K0CKJ5_9COLE) HSP 1 Score: 52.8 bits (125), Expect = 1.740e-6 Identity = 26/60 (43.33%), Postives = 40/60 (66.67%), Query Frame = 3
Query: 3 KSGITRLEEESFQRLPVQIAGKVPRGSGEYDFDEDRFFEKGEVSRLSTFMQYALVAADEA 182
KSGIT+LE S+++LP ++AG + G +F+ ++ F K E+ ST + YAL+AA EA
Sbjct: 31 KSGITKLEGPSYEKLPSRVAGVIRENGG--NFELNKHFSKSELRSTSTAIAYALLAAKEA 88
BLAST of mRNA_H-akashiwo_Contig1239.3.1 vs. uniprot
Match: UPI001BB108CB (3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB108CB) HSP 1 Score: 52.8 bits (125), Expect = 1.740e-6 Identity = 23/60 (38.33%), Postives = 39/60 (65.00%), Query Frame = 3
Query: 3 KSGITRLEEESFQRLPVQIAGKVPRGSGEYDFDEDRFFEKGEVSRLSTFMQYALVAADEA 182
+SGIT++ + F+ +P Q+AG VP+G+GE +FD R+ ++ +S ++L AA EA
Sbjct: 62 ESGITKITGDQFKGIPCQVAGFVPKGTGEGEFDALRYVSSSDLRSMSQATIFSLAAAQEA 121
BLAST of mRNA_H-akashiwo_Contig1239.3.1 vs. uniprot
Match: A0A7X2FXH9_9PROT (3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Alphaproteobacteria bacterium HT1-32 TaxID=2665153 RepID=A0A7X2FXH9_9PROT) HSP 1 Score: 51.6 bits (122), Expect = 4.450e-6 Identity = 24/60 (40.00%), Postives = 37/60 (61.67%), Query Frame = 3
Query: 3 KSGITRLEEESFQRLPVQIAGKVPRGSGEYDFDEDRFFEKGEVSRLSTFMQYALVAADEA 182
+SGIT + + +RLP ++AG VP G GE +F+ D F E ++ F+ +A+ AA EA
Sbjct: 30 ESGITSITKFDTERLPSKVAGDVPLGDGEGNFNADNFILPKEQRKMDAFVIFAMAAAQEA 89
BLAST of mRNA_H-akashiwo_Contig1239.3.1 vs. uniprot
Match: A0A0K1QE53_9DELT (3-oxoacyl-[acyl-carrier-protein] synthase 2 n=2 Tax=Myxococcales TaxID=29 RepID=A0A0K1QE53_9DELT) HSP 1 Score: 51.6 bits (122), Expect = 4.450e-6 Identity = 25/60 (41.67%), Postives = 37/60 (61.67%), Query Frame = 3
Query: 3 KSGITRLEEESFQRLPVQIAGKVPRGSGEYDFDEDRFFEKGEVSRLSTFMQYALVAADEA 182
+SGI R+E +P +IAG+VPRG G+ +F+ E+ RLS F+ +A+ AA EA
Sbjct: 30 QSGIRRIESFDVSDIPTKIAGQVPRGEGDGEFNPLALAPAKELRRLSDFILFAMAAASEA 89
BLAST of mRNA_H-akashiwo_Contig1239.3.1 vs. uniprot
Match: A0A484H4V3_9ZZZZ (3-oxoacyl-[acyl-carrier-protein] synthase, KASII n=1 Tax=invertebrate metagenome TaxID=1711999 RepID=A0A484H4V3_9ZZZZ) HSP 1 Score: 51.2 bits (121), Expect = 6.080e-6 Identity = 28/60 (46.67%), Postives = 34/60 (56.67%), Query Frame = 3
Query: 3 KSGITRLEEESFQRLPVQIAGKVPRGSGEYDFDEDRFFEKGEVSRLSTFMQYALVAADEA 182
+SGI + LP QIAG VPRGSGE F+ D+F E R+ F+ YAL A EA
Sbjct: 30 RSGIRAIGHFDVSDLPSQIAGIVPRGSGEGLFNPDQFVPPREQRRMDDFIIYALAATTEA 89
BLAST of mRNA_H-akashiwo_Contig1239.3.1 vs. uniprot
Match: R5XSK5_9PROT (3-oxoacyl-[acyl-carrier-protein] synthase 2 n=2 Tax=Acetobacter TaxID=434 RepID=R5XSK5_9PROT) HSP 1 Score: 51.2 bits (121), Expect = 6.090e-6 Identity = 24/60 (40.00%), Postives = 35/60 (58.33%), Query Frame = 3
Query: 3 KSGITRLEEESFQRLPVQIAGKVPRGSGEYDFDEDRFFEKGEVSRLSTFMQYALVAADEA 182
KSGI+R+E + +PV IAG+VP G E DF+ D F + + F+ Y + AA +A
Sbjct: 30 KSGISRIEGVDLKDIPVMIAGQVPFGENEPDFNPDTVFAPKDQKKNDKFIMYGMAAAGDA 89
BLAST of mRNA_H-akashiwo_Contig1239.3.1 vs. uniprot
Match: UPI000771D65C (3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial n=1 Tax=Cephus cinctus TaxID=211228 RepID=UPI000771D65C) HSP 1 Score: 51.2 bits (121), Expect = 6.090e-6 Identity = 22/60 (36.67%), Postives = 36/60 (60.00%), Query Frame = 3
Query: 3 KSGITRLEEESFQRLPVQIAGKVPRGSGEYDFDEDRFFEKGEVSRLSTFMQYALVAADEA 182
KSG+ +L+E +++LP +I VP+G Y + + F K E+ + YALVA++EA
Sbjct: 48 KSGVIKLDEPGYEKLPCKIGAVVPKGDKPYQLNIEAKFSKSEIRSMCPATAYALVASEEA 107 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1239.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1239.3.1 >prot_H-akashiwo_Contig1239.3.1 ID=prot_H-akashiwo_Contig1239.3.1|Name=mRNA_H-akashiwo_Contig1239.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=61bp GRVALRGWKKRAFNVSQFRSPGRYPEDLASMTLMKTVSSKRAKSAVCQRSback to top mRNA from alignment at H-akashiwo_Contig1239:341557..342107- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1239.3.1 ID=mRNA_H-akashiwo_Contig1239.3.1|Name=mRNA_H-akashiwo_Contig1239.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=551bp|location=Sequence derived from alignment at H-akashiwo_Contig1239:341557..342107- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1239:341557..342107- >mRNA_H-akashiwo_Contig1239.3.1 ID=mRNA_H-akashiwo_Contig1239.3.1|Name=mRNA_H-akashiwo_Contig1239.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=183bp|location=Sequence derived from alignment at H-akashiwo_Contig1239:341557..342107- (Heterosigma akashiwo CCMP452)back to top |