mRNA_H-akashiwo_Contig123.24.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig123.24.1
Unique NamemRNA_H-akashiwo_Contig123.24.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig123.24.1 vs. uniprot
Match: A0A7S3XV63_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV63_HETAK)

HSP 1 Score: 650 bits (1678), Expect = 6.110e-223
Identity = 318/558 (56.99%), Postives = 393/558 (70.43%), Query Frame = 3
Query:  198 FNALIVMVGKRDQSVCLCMDLRGLNKITETVKFPLPTPREMFDQLANSWWYSSMDCRWAYWSVPLREQDQAKTSFTIRNRKYCWKMMCFGLKNAPATFSHLMNKVFQGCQYDFALCFLDDVLCYSGKDFNQHLEHLEEIFRRLKVANLKLKLPKCWFGADQLPFLGHIASREGLKPDPKKIEAVRRLRRPGSKKQVRSLLGLASYYRQFVPGFASMASPLYQLLKKEAPRTIQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMMVIETDASSTGLGAVLLQETDLGRQPNAYASRSCSPQEKNYSATEIECLGAIFALKTFRCYVIGSRFRLVTDHQALKNLKLVKKPSGRVARWLMTLLEYDFELVYRSGKLNTTADCLSRLPRADSIDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYQRPR-----RQEEILSGTIFSDPSVETENIAKAQREDPL--------------------------YMSSCWGILWHHYDYQGENRRKGTRLQMIVPEVMRTQILQWAHEGAFGTHVGREKAFEALLEGYWWPNMARD 1778
            FNA IVMV K+     +C+DLR LN IT   KFPLPT REMFD LA +++++S+D  WAYWSVPLRE D++KT+FT+RNRKY + +MCFGL NAPATFSHL+NKVFQGCQY+FALCFLDDVLCYS ++F  HL HL +IF+R++ ANLK KLPKC FGA Q+PFLGH+ASREGLKPDPKKIEAVR+LRRP SKKQVR LLGLASYYRQFVP FAS+A+PLY+L K + P+ + W DDCEW+FQ +KDSLTSAP L +P W K  ++ETDAS TGLGA+LLQ+T  G +P AYASR CSP E NYSATE+ECLG I+AL+ FRCYV+G  F LVTDH++L++LK +K P+GR ARWLMTL+E+ +   YR GKL   AD LSRLPRA +I                                +R R       +E +S T      +  E+I+KAQ+ED                            YM    G+LWH Y+YQG+NRR+GTR+Q++VP  +   +LQWAH+GAFG H+GR+KA E L +GY+W NMARD
Sbjct:  133 FNAPIVMVAKKSGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREGLKPDPKKIEAVRKLRRPESKKQVRQLLGLASYYRQFVPNFASIAAPLYKLTK-DKPKGVLWDDDCEWAFQEIKDSLTSAPVLMYPRWDKPFIVETDASKTGLGAILLQQTQRGTRPIAYASRLCSPTEANYSATELECLGVIYALQQFRCYVMGREFTLVTDHKSLEDLKRIKNPTGRRARWLMTLMEFMYNTQYRKGKLMAPADALSRLPRAGAIQPKEGEADDENIVAAITRAQAGEAQQLKKQTRKRTRMVTEEEPQEKMSETEEKQLGIRPEDISKAQQEDEFCGPIMEYLKTPGGNKTVSREIVHWSRYMILEKGLLWHQYEYQGDNRRRGTRIQLVVPTALHEVMLQWAHQGAFGAHIGRDKALEILRQGYFWVNMARD 689          
BLAST of mRNA_H-akashiwo_Contig123.24.1 vs. uniprot
Match: A0A7S3XVA0_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVA0_HETAK)

HSP 1 Score: 535 bits (1378), Expect = 1.670e-180
Identity = 250/369 (67.75%), Postives = 303/369 (82.11%), Query Frame = 3
Query:  198 FNALIVMVGKRDQSVCLCMDLRGLNKITETVKFPLPTPREMFDQLANSWWYSSMDCRWAYWSVPLREQDQAKTSFTIRNRKYCWKMMCFGLKNAPATFSHLMNKVFQGCQYDFALCFLDDVLCYSGKDFNQHLEHLEEIFRRLKVANLKLKLPKCWFGADQLPFLGHIASREGLKPDPKKIEAVRRLRRPGSKKQVRSLLGLASYYRQFVPGFASMASPLYQLLKKEAPRTIQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMMVIETDASSTGLGAVLLQETDLGRQPNAYASRSCSPQEKNYSATEIECLGAIFALKTFRCYVIGSRFRLVTDHQALKNLKLVKKPSGRVARWLMTLLEYDFELVYR 1304
            FNA IVMV K+     +C+DLR LN IT   KFPLPT REMFD LA +++++S+D  WAYWSVPLRE D++KT+FT+RNRKY + +MCFGL NAPATFSHL+NKVFQGCQY+FALCFLDDVLCYS ++F  HL HL +IF+R++ ANLK KLPKC FGA Q+PFLGH+ASREGLKPDPKKIEAVR+LRRP SKKQVR LLGLASYYRQFVP FAS+A+PLY+L K + P+ + W DDCEW+FQ +KDSLTSAP L +P W K  ++ETDAS TGLGA+LLQ+T  G +P AYASR CSP E NYSATE+ECLG I+AL+ FRCYV+G  F LVTDH++L++LK +K P+GR ARWLMTL+E+ +   YR
Sbjct:  133 FNAPIVMVAKKSGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREGLKPDPKKIEAVRKLRRPESKKQVRQLLGLASYYRQFVPNFASIAAPLYKLTK-DKPKGVLWDDDCEWAFQEIKDSLTSAPVLMYPRWDKPFIVETDASKTGLGAILLQQTQRGTRPIAYASRLCSPTEANYSATELECLGVIYALQQFRCYVMGREFTLVTDHKSLEDLKRIKNPTGRRARWLMTLMEFMYNTQYR 500          
BLAST of mRNA_H-akashiwo_Contig123.24.1 vs. uniprot
Match: A0A7S3XU57_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU57_HETAK)

HSP 1 Score: 464 bits (1194), Expect = 1.600e-155
Identity = 216/321 (67.29%), Postives = 265/321 (82.55%), Query Frame = 3
Query:  216 MVGKRDQSVCLCMDLRGLNKITETVKFPLPTPREMFDQLANSWWYSSMDCRWAYWSVPLREQDQAKTSFTIRNRKYCWKMMCFGLKNAPATFSHLMNKVFQGCQYDFALCFLDDVLCYSGKDFNQHLEHLEEIFRRLKVANLKLKLPKCWFGADQLPFLGHIASREGLKPDPKKIEAVRRLRRPGSKKQVRSLLGLASYYRQFVPGFASMASPLYQLLKKEAPRTIQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMMVIETDASSTGLGAVLLQETDLGRQPNAYASRSCSPQEKNYSATEIECLGAIFALKTFRCYVIG 1178
            MV K+     +C+DLR LN IT   KFPLPTPREMFDQL  ++++SS+D  WAYWSVPLR++D+ KT+FT+RN+KY + +MCFGL NAPATFSHL+NKVFQGCQ+DFALCFLDDVLCY+G DF+ HL  LEEIF R+  ANLK KLPKC FGA Q+PFLGHIA+REGLKPDPKKIEA+++L+RP +KKQVR +LGLASYYRQFVP FA+ A+PLY L KKE P+ ++WTDDCEW+FQ LKD+LT+AP L FP+++K   IETDAS  GLGA+L Q+T  GR+P AYASR C+  E NYSATE+ECLG IF ++ FRCY++G
Sbjct:    1 MVKKKTGETRMCLDLRSLNAITTPAKFPLPTPREMFDQLEGAYYFSSLDMLWAYWSVPLRDEDKHKTAFTVRNKKYAFNVMCFGLTNAPATFSHLVNKVFQGCQHDFALCFLDDVLCYTGPDFSLHLRQLEEIFIRMIKANLKFKLPKCLFGAAQVPFLGHIATREGLKPDPKKIEAIKKLQRPQTKKQVRQVLGLASYYRQFVPNFAATAAPLYTLTKKE-PKGVEWTDDCEWAFQNLKDTLTTAPILIFPNFNKEFTIETDASKHGLGAILSQDTTEGRKPVAYASRVCNSAEANYSATELECLGVIFGIQQFRCYILG 320          
BLAST of mRNA_H-akashiwo_Contig123.24.1 vs. uniprot
Match: A0A131XQ77_IXORI (RNA-directed DNA polymerase (Fragment) n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A131XQ77_IXORI)

HSP 1 Score: 410 bits (1055), Expect = 6.070e-127
Identity = 251/740 (33.92%), Postives = 392/740 (52.97%), Query Frame = 3
Query:  210 IVMVGKRDQSVCLCMDLRGLNKITETVKFPLPTPREMFDQLANSWWYSSMDCRWAYWSVPLREQDQAKTSFTIRNRKYCWKMMCFGLKNAPATFSHLMNKVFQGCQYDFALCFLDDVLCYSGKDFNQHLEHLEEIFRRLKVANLKLKLPKCWFGADQLPFLGHIASREGLKPDPKKIEAVRRLRRPGSKKQVRSLLGLASYYRQFVPGFASMASPLYQLLKKEAPRTIQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMMVIETDASSTGLGAVLLQETDLGRQPN--AYASRSCSPQEKNYSATEIECLGAIFALKTFRCYVIGSRFRLVTDHQALKNLKLVKKPSGRVARWLMTLLEYDFELVYRSGKLNTTADCLSRLPR-----ADSIDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYQRPRRQEEILSGTIFSDPSVET------ENIAKAQREDPLY------MSSCWGILWHH-YDYQGENRRKGTRLQMIVPEVMRTQILQWAHEGAFGTHVGREKAFEALLEGYWWPNMARDLGHFIRTCSTCQQFK-DPAPKLRQRVPILKKPMASQPFQTVCIDA------CTVRSRNIMLFICQFSGYVEIQLMTGPI---NGRSLSEAYLNCVVLRHSNPMTVVSDNASYQVGGNFAQLLNKLGTKSTPVTSYHAQANGKVERCVSSIKKLLKTVADDNDNLDWTKLVPIAAFAFNTSFNRIIGNKPFFLVTGRE 2339
            +V+V K+D SV  C+D R LN IT+   +P+P   +  D L  + +Y+S+D R  YW +P+ E D+AKT+F   +  + + +M FGL NAPATF  +++ + +G ++   LC+LDDV+ +S   F++HL+ L E+   +  A L+L   KC F A Q+  LGH+ SR+G++PDP+K+ AV     P + KQ++S LGL SY+R+F+ GFA++ASPL  LL    P   +WT DC++SF TL+  L+S P L   D +    + TDAS TGLGAVLLQ+    R+P+  AYASR+ +  EKNY+ TE ECL  ++A+  FR Y+ G  F +VTDH AL  L  +K  SGR+ RW++ L EY+F ++++SG+ +  AD LSR P       D IDD                                P     +   T+ S  + +        ++A +  +DP +       +   GIL+ H Y  +GE      RL +++P+ +R  +L   H+     H+G  K +  L   Y+WP M R +  ++++C  CQ  K  P     Q +P+   P   +PF  V ID        +   R I++ I   + Y E    T P+     + +++ +L+ +VLRH  P  ++SD  +  +     ++L          ++YH Q NG  ER   ++ +++      ND+ +W  ++P   FA+NTS        PFFLV GR+
Sbjct:   92 VVLVRKKDGSVRFCVDYRKLNNITQKDSYPMPRIDDALDTLQGAKYYTSLDLRSGYWQIPMSESDKAKTAFVTPDGLFEFNVMPFGLCNAPATFERMIDSILRGLKWRTCLCYLDDVIVFSST-FDEHLDRLSEVLSCISGAGLQLNTKKCHFAATQIKVLGHLVSRDGIRPDPEKVRAVYSFPHPATSKQLKSFLGLCSYFRRFIRGFANIASPLTHLLSTNVP--YKWTPDCQFSFDTLRKVLSSGPILQHFDETASTELHTDASGTGLGAVLLQKHPSSREPHVIAYASRTLTRPEKNYTVTEQECLAVVWAIGRFRPYLFGRPFTVVTDHNALCWLGSMKNLSGRLGRWILRLQEYNFTVLHKSGRKHLDADGLSRCPLPPNFVTDVIDDD-------------------------------PPTVSSLTPTTLVSSQAQDPWCARIIHHLA-SPLQDPKFHRKIRNFTRLNGILYKHSYIPEGE------RLLLVIPKPLRRTVLAAFHDDPTAGHLGTYKTYARLRSRYFWPGMYRAVEKYVQSCVPCQTRKTSPHASDGQLMPL---PCPKRPFDRVGIDLYGPLPMSSAGHRWIVVAIDHLTRYAE----TAPLISATAQEIAQFFLSSIVLRHGAPRFLLSDRGTAFLSALVQEVLAASRVIHQLTSAYHPQTNGLTERFNRTLSQMVSMYIS-NDHRNWHSILPFITFAYNTSVQSTTRFSPFFLVYGRD 782          
BLAST of mRNA_H-akashiwo_Contig123.24.1 vs. uniprot
Match: L7MA76_RHIPC (RNA-directed DNA polymerase (Fragment) n=1 Tax=Rhipicephalus pulchellus TaxID=72859 RepID=L7MA76_RHIPC)

HSP 1 Score: 414 bits (1064), Expect = 5.900e-126
Identity = 245/726 (33.75%), Postives = 380/726 (52.34%), Query Frame = 3
Query:  210 IVMVGKRDQSVCLCMDLRGLNKITETVKFPLPTPREMFDQLANSWWYSSMDCRWAYWSVPLREQDQAKTSFTIRNRKYCWKMMCFGLKNAPATFSHLMNKVFQGCQYDFALCFLDDVLCYSGKDFNQHLEHLEEIFRRLKVANLKLKLPKCWFGADQLPFLGHIASREGLKPDPKKIEAVRRLRRPGSKKQVRSLLGLASYYRQFVPGFASMASPLYQLLKKEAPRTIQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMMVIETDASSTGLGAVLLQETDLG-RQPNAYASRSCSPQEKNYSATEIECLGAIFALKTFRCYVIGSRFRLVTDHQALKNLKLVKKPSGRVARWLMTLLEYDFELVYRSGKLNTTADCLSRLPRADS----IDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYQRP--RRQEEILSGTIFSDPSVETENIAKAQREDPLYMSSCWGILWHHYDYQGENRRKGTRLQMIVPEVMRTQILQWAHEGAFGTHVGREKAFEALLEGYWWPNMARDLGHFIRTCSTCQQFKDPAPKLRQRVPILKKPMASQPFQTVCID------ACTVRSRNIMLFICQFSGYVEIQLMTGPINGRSLSEA--YLNCVVLRHSNPMTVVSDNASYQVGGNFAQLLNKLGTKSTPVTSYHAQANGKVERCVSSIKKLLKTVADDNDNLDWTKLVPIAAFAFNTSFNRIIGNKPFFLVTGREP 2342
            +V+V K+D SV  C+D R LNKIT    +P+P   +  D L  + ++SS+D R  YW +P+ E D+ KT+F   +  Y + +M FGL NAPATF  +++ V +G ++   LC+LDD++ +S   F QHL+ L+E+   L  A L+L   KC F    +  LGH+ S++G++PDP KI AV R  RP   K++RS LGLASY+R+F+  FAS+A+PL+QLL  + P    W+D+C+ +F  LK +LTS P L   D +   ++ TDAS  G+GAVLLQ  +    +  AYASR+ +  EKNY+ TE ECL  +++++ FR Y+ G  F +VTDH AL  L  +K  SGR+ RW + L EYDF+++Y+SG+ +  AD LSR P   +     +                             Q   P  RR    LSG      +     + + + E+        G+L+ H  +       G R   ++P  +R  +L+  H+     H+G +K  + +   ++WP ++  +  ++ +C  CQ+ K   P      P+   P  + PF+ V +D      A +   R I+  +   + Y E    T  + G ++  A   L+ +VLRH  P  ++SD     +     ++L   GT     +SYH Q NG  ER   ++  ++  V    D+ +W  L+P   FA+NT+  R  G  PF+LV GR P
Sbjct:  337 VVLVRKKDGSVRFCVDYRALNKITRKDVYPMPRIDDALDSLQGAEYFSSLDLRSGYWQIPMHEDDKEKTAFATPDGLYEFNVMPFGLCNAPATFERMIDTVLRGLKWKTCLCYLDDIVIFSST-FPQHLQRLDEVLTCLASAGLQLNTKKCCFATKSIKVLGHVVSKDGIRPDPDKIAAVLRFPRPERPKELRSFLGLASYFRRFIQHFASIAAPLHQLLASDVP--FLWSDECQTAFDLLKGALTSEPVLCHFDEAAPTILHTDASGRGVGAVLLQRDNSSLERVVAYASRALTAAEKNYTITEQECLAVVWSVQKFRPYLHGRHFTIVTDHHALCWLSTLKNLSGRLGRWTLRLQEYDFDIIYKSGRKHQDADALSRCPLPSTQIKVAESSAVTSTAVPSLASIDQLFSDDEPTFSSHQLSDPYCRRIMGHLSGASHPPNARLRRQLLQFRLEN--------GVLYRHIYHPD-----GQRWVPVLPRSLRLHVLKAFHDDLTAGHLGFQKTLDRIRCRFYWPGLSTSVARYVGSCFPCQRRK--LPTSAPAGPLQPIPCPTMPFEVVGVDLYGPLPATSTGKRWIVTAVDHLTRYAET---TSVVTGSAVEVADFVLHAIVLRHGAPRILLSDRGRVFLSQLLHEVLRASGTTHKTASSYHPQTNGLTERFHRTLADMI-AVYIQPDHKNWDTLLPFLTFAYNTAVQRTTGYSPFYLVYGRPP 1040          
BLAST of mRNA_H-akashiwo_Contig123.24.1 vs. uniprot
Match: A0A6S7JC88_PARCT (Transposon Ty3-G Gag-Pol poly n=6 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JC88_PARCT)

HSP 1 Score: 407 bits (1045), Expect = 4.340e-124
Identity = 252/733 (34.38%), Postives = 373/733 (50.89%), Query Frame = 3
Query:  210 IVMVGKRDQSVCLCMDLRGLNKITETVKFPLPTPREMFDQLANSWWYSSMDCRWAYWSVPLREQDQAKTSFTIRNRKYCWKMMCFGLKNAPATFSHLMNKVFQGCQYDFALCFLDDVLCYSGKDFNQHLEHLEEIFRRLKVANLKLKLPKCWFGADQLPFLGHIASREGLKPDPKKIEAVRRLRRPGSKKQVRSLLGLASYYRQFVPGFASMASPLYQLLKKEAPRTIQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMMVIETDASSTGLGAVLLQETDLGRQPNAYASRSCSPQEKNYSATEIECLGAIFALKTFRCYVIGSRFRLVTDHQALKNLKLVKKPSGRVARWLMTLLEYDFELVYRSGKLNTTADCLSRLPRAD--SIDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYQRPRRQEEILSGTIFSD-PSVETENIAKAQREDPLYMSSCW-------GILWHHYDYQGENRRKGT---RLQMIVPEVMRTQILQWAHEGAFGTHVGREKAFEALLEGYWWPNMARDLGHFIRTCSTCQQFKDPAPKLRQRVPILKKPMAS----QPFQTVCIDAC-----TVRSRNIMLFICQ-FSGYVEIQLMTGPINGRSLSEAYLNCVVLRHSNPMTVVSDNASYQVGGNFAQLLNKLGTKSTPVTSYHAQANGKVERCVSSIKKLLKTVADDNDNLDWTKLVPIAAFAFNTSFNRIIGNKPFFLVTGRE 2339
            IV+  K+D     C+D R +N +T+    P+P   E+ DQL  + ++S++D    YW VPLRE+D  KT+F++    Y + +M FGL NAPATF  +M  +  G +    L F+DD++ +S   + +H   L+E+FRR++ A LK+K  KC F  + + FLGHI S  G +PD  K+EAVR    P S   VR+ +G+ASYYR+F+  FA +A+PL+ L K   P    WT   + +F  LK  L SAP L+ PD+S    I TDAS  GLGAVL Q         AYASR+ +  EKNYS TE ECL  ++ +  +R Y++G+ F +VTDHQ+L  L+ +K+P GR+ARW++ L EYDFE+ +R G+ ++ AD LSR PR     I D                            Q   P     +   +   D P    +N    +  +       W       G+L    D       KGT   RL ++VP  MR  +L+ +H+     H+G  +  E L   Y+WP MA ++  +I  C  C + K P       VP  K PM S    QP +   +D       T R    +L +   F+ +VE   M       ++++A++N VV RH  P  +++D           Q+ + LG +    + YH Q +G+VER   ++K +L T   + D+ DW   +P+A FA+  S +   G  PF  + GRE
Sbjct:  144 IVLAPKKDGDYRFCVDFRRVNSVTKKDAHPMPRIDEILDQLGGARYFSTLDLASGYWQVPLREEDMEKTAFSVGANHYEFTVMPFGLTNAPATFQRMMGNILMGIKG--CLVFMDDIIIFSDT-WEEHQRILDEVFRRIRAAGLKIKRDKCQFAQESVKFLGHIVSARGTEPDSSKVEAVREFATPTSLTDVRAFVGMASYYRRFIKNFADIAAPLHDLTKGGQPEFC-WTPVADKAFNDLKSRLCSAPILSLPDFSVPFTIYTDASDFGLGAVLSQRRGENEYVIAYASRTLTSAEKNYSTTEKECLAIVWTVNYWRPYLLGNTFDIVTDHQSLTWLQGLKEPKGRLARWILALQEYDFEIKHRPGRQHSNADTLSRFPRVTPPQIPDQSVDEDLMVGVNGTEVCTSWSKTEILKAQQDDPSISMIMQKLSCSDDLPEEGNDNDNSKENGERRRYRQLWSQLEMVDGVLHRCVD-------KGTPSKRLVLVVPRKMRCDLLKLSHDDPCSGHMGINRCLERLQRRYYWPGMAAEVQLWIAECEKCNRRKTP-------VPSQKAPMQSIEIGQPMELWAMDVLGPLPMTARGNQYILVMSDHFTKWVEAVPMPNQ-RAETVAKAFVNEVVTRHGVPSKLLTDQGRNFEADLMKQVFSLLGVRKLRTSPYHPQTDGQVERMNRTLKGIL-TAYVNKDHNDWDDHLPLALFAYRNSVHSSSGISPFQAIYGRE 856          
BLAST of mRNA_H-akashiwo_Contig123.24.1 vs. uniprot
Match: L7MCS8_RHIPC (RNA-directed DNA polymerase (Fragment) n=1 Tax=Rhipicephalus pulchellus TaxID=72859 RepID=L7MCS8_RHIPC)

HSP 1 Score: 402 bits (1032), Expect = 3.640e-122
Identity = 234/723 (32.37%), Postives = 369/723 (51.04%), Query Frame = 3
Query:  204 ALIVMVGKRDQSVCLCMDLRGLNKITETVKFPLPTPREMFDQLANSWWYSSMDCRWAYWSVPLREQDQAKTSFTIRNRKYCWKMMCFGLKNAPATFSHLMNKVFQGCQYDFALCFLDDVLCYSGKDFNQHLEHLEEIFRRLKVANLKLKLPKCWFGADQLPFLGHIASREGLKPDPKKIEAVRRLRRPGSKKQVRSLLGLASYYRQFVPGFASMASPLYQLLKKEAPRTIQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMMVIETDASSTGLGAVLLQETDLGRQPNAYASRSCSPQEKNYSATEIECLGAIFALKTFRCYVIGSRFRLVTDHQALKNLKLVKKPSGRVARWLMTLLEYDFELVYRSGKLNTTADCLSRLPRADSIDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYQRPRRQEEILSGTIFSDPSVETENIAKAQREDPLYMSSCWGILWHHYDYQGENRRKGTRLQMIVPEVMRTQILQWAHEGAFGTHVGREKAFEALLEGYWWPNMARDLGHFIRTCSTCQQFKDP----APKLRQRVPILKKPMASQPFQTVCIDAC------TVRSRNIMLFICQFSGYVEIQLMTGPINGRSLSEAYLNCVVLRHSNPMTVVSDNASYQVGGNFAQLLNKLGTKSTPVTSYHAQANGKVERCVSSIKKLLKTVADDNDNLDWTKLVPIAAFAFNTSFNRIIGNKPFFLVTGREP 2342
            A +++V K+D S   C+D R LN +T+   +PLP   +  D L ++ ++SS+D R  YW +P+   D+ KT+F   +  + + +M FGL NAPATF   M+ + +G +++  +C+LDDV+ + G+ F++H + L  +   +K A L L   KC FG  Q   LG++  R G++PDP KI AVR  + P + K +RS LGL SY+R+F+  FA +A PL  LL+K+ P   +WT +CE +F+ LK  LTS P L   D   +  + TDAS  G+GAVL+Q  D  +   AYASR+ +  E NY+ TE+ECL  ++A+  FR Y+ G  F++VTDH +L  L  ++ P+GR+ARW + L EY+F + Y+SG+ +  ADCLSRLP  ++  D                                     +++S     DPS+     A  +           G+L     Y+      G  L ++VPE +R  + +  H+     H+G  +    + + ++WP + +   H++ +C  CQ+ K P    A  L+Q  P       + PF+ V ID        +   R I++ +   + Y E   +    +   +S   L+ ++LRH  P  V+SD           +LL   G      T YH Q NG  ER   +I  +L       D+ +W  ++P   +AFNT+ + + G  PFFL+  R P
Sbjct:  256 APVILVKKKDNSWRFCVDYRRLNAVTKKDVYPLPRIDDAVDCLHSAAYFSSVDLRSGYWQIPMHPTDREKTAFVTPDGLFEFNVMPFGLCNAPATFERFMDSILRGLKWETCMCYLDDVIIF-GRTFHEHNQRLSVVLNCIKQAGLILNSKKCHFGERQAVVLGYLVDRNGIRPDPNKITAVRNFKPPKTVKDLRSFLGLCSYFRRFIKDFAQLAHPLTDLLRKDTP--YRWTTECEAAFEQLKFLLTSGPLLHHFDPEALTELHTDASGVGVGAVLVQFHDGRQHVVAYASRALTKAESNYTVTELECLAVVYAIHKFRPYLYGRHFKIVTDHHSLCWLVGLRDPAGRLARWALRLQEYNFSVAYKSGRCHADADCLSRLPSPNTSADDDDFDNYLAAISSDFPSM-------------------DLVSQEQLRDPSLRPVIDATNRSRHATQFVIRDGVL-----YRKNYSSNGAPLLLVVPERLRLAVFRAMHDDITSGHLGFARTLHRIRQRFYWPRLWKTTKHYVASCDVCQRHKQPTALPAGTLQQITP------PTSPFEKVGIDLLGPFPKSSTGRRWIIVCVDYLTRYTETMALASATSS-DVSWFLLHSIILRHGAPRVVISDRGRQFTADVVEELLRLCGCHYRHSTPYHPQTNGLTERTNRTIINMLSMYVSA-DHKNWDAVLPFITYAFNTAKHEVTGYTPFFLLYARHP 943          
BLAST of mRNA_H-akashiwo_Contig123.24.1 vs. uniprot
Match: L7LW12_RHIPC (RNA-directed DNA polymerase n=1 Tax=Rhipicephalus pulchellus TaxID=72859 RepID=L7LW12_RHIPC)

HSP 1 Score: 402 bits (1034), Expect = 3.900e-122
Identity = 240/738 (32.52%), Postives = 376/738 (50.95%), Query Frame = 3
Query:  204 ALIVMVGKRDQSVCLCMDLRGLNKITETVKFPLPTPREMFDQLANSWWYSSMDCRWAYWSVPLREQDQAKTSFTIRNRKYCWKMMCFGLKNAPATFSHLMNKVFQGCQYDFALCFLDDVLCYSGKDFNQHLEHLEEIFRRLKVANLKLKLPKCWFGADQLPFLGHIASREGLKPDPKKIEAVRRLRRPGSKKQVRSLLGLASYYRQFVPGFASMASPLYQLLKKEAPRTIQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMMVIETDASSTGLGAVLLQETDLGRQPNAYASRSCSPQEKNYSATEIECLGAIFALKTFRCYVIGSRFRLVTDHQALKNLKLVKKPSGRVARWLMTLLEYDFELVYRSGKLNTTADCLSRLP------RADSIDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYQRPRRQEEILSGTIFSDPSVETENIAKAQRED----PLYMSS-----CW----GILWHHYDYQGENRRKGTRLQMIVPEVMRTQILQWAHEGAFGTHVGREKAFEALLEGYWWPNMARDLGHFIRTCSTCQQFKDPAPKLRQRVPILKKPMASQPFQTVCIDAC------TVRSRNIMLFICQFSGYVEIQLMTGPINGRSLSEAYLNCVVLRHSNPMTVVSDNASYQVGGNFAQLLNKLGTKSTPVTSYHAQANGKVERCVSSIKKLLKTVADDNDNLDWTKLVPIAAFAFNTSFNRIIGNKPFFLVTGREP 2342
            A +++V K+D +   C+D R LN +T+   +PLP   ++ D L ++ ++SS+D R  YW +P+   D+ KT+F   +  + + +M FGL NAPATF   M+ + +G +++  LC+LDD++ + G+ F++H   L+ +   L+ A L L   KC FG  +   LGH+  + G++PDP+K+ AV   ++P S +++RS LGL SY+R+FVP FA +A PL  LL K+ P   +W+ +CE SF  LK  LTS P L   D S    + TDAS  GLGAVL+Q         AYASR  S  E+NY+ TE ECL  +FA+  FR Y+ G +F ++TDH +L  L  ++ PSGR+ARW + L E+DFE+ Y+SG+ +  ADCLSRLP       AD+ D+                                           +   P  +       QR D    P +MS      C+    GIL+   +Y G    KG RL ++VP  +R  +L+ AH+     H+G  + F+   + ++WP M R +  ++ +C  CQ++K P  +    +  +  P    PF+ V +D        T  +R I++ +   + Y E   +        +S   L+ ++LRH +P  ++SD     V      LL    +     T YH Q NG  ER   ++  ++    D      W  ++P   FA+NT+ +      PF+L+  R+P
Sbjct:  289 APVILVRKKDGTWRFCVDYRRLNSVTKKDVYPLPRIDDVIDCLHSASYFSSVDLRSGYWQIPMHPNDKEKTAFITPDGLFEFNVMPFGLCNAPATFERFMDTILRGLKWEVCLCYLDDIIIF-GRTFDEHNHRLDTVLTCLERAALTLNSKKCHFGNRETLVLGHLVDKHGVRPDPQKVAAVSSFKQPESIRELRSFLGLCSYFRRFVPKFADLAYPLTCLLNKDVP--FRWSAECESSFSQLKFLLTSGPVLRHYDPSAATEVHTDASGVGLGAVLVQRHGAVEHVVAYASRCLSKPERNYTVTEQECLAVVFAVHKFRPYIYGRQFSVITDHHSLCWLTGLRDPSGRLARWALLLQEHDFEVCYKSGRRHADADCLSRLPLPTTACEADNFDEYL----------------------------------------AVVDAPFPDLATFRTEQRSDSSLAPFFMSRTNGQRCFVVKDGILYKK-NYSG----KGARLLLVVPTSLRRHVLRAAHDEPTSGHMGFSRTFQRTQDRFFWPKMRRSVSAYVASCERCQRYKRPTSEPAGLLHPIAPP--GSPFEVVGVDLLGPFPRSTNGNRWIIVGVDHLTRYAETAAIPAA-TATQVSHFMLSHIILRHGSPRVIISDRGRQFVADVVEDLLRLATSHFRHATPYHPQTNGLTERTNRTLVNMISMYVDSGHKT-WDAVLPFITFAYNTAQHETTRYSPFYLLYVRQP 974          
BLAST of mRNA_H-akashiwo_Contig123.24.1 vs. uniprot
Match: A0A6B0VG58_IXORI (RNA-directed DNA polymerase (Fragment) n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A6B0VG58_IXORI)

HSP 1 Score: 398 bits (1022), Expect = 5.090e-122
Identity = 239/730 (32.74%), Postives = 379/730 (51.92%), Query Frame = 3
Query:  198 FNALIVMVGKRDQSVCLCMDLRGLNKITETVKFPLPTPREMFDQLANSWWYSSMDCRWAYWSVPLREQDQAKTSFTIRNRKYCWKMMCFGLKNAPATFSHLMNKVFQGCQYDFALCFLDDVLCYSGKDFNQHLEHLEEIFRRLKVANLKLKLPKCWFGADQLPFLGHIASREGLKPDPKKIEAVRRLRRPGSKKQVRSLLGLASYYRQFVPGFASMASPLYQLLKKEAPRTIQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMMVIETDASSTGLGAVLLQETD-LGRQPNAYASRSCSPQEKNYSATEIECLGAIFALKTFRCYVIGSRFRLVTDHQALKNLKLVKKPSGRVARWLMTLLEYDFELVYRSGKLNTTADCLSR--LPRADSIDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYQRPRRQEEILSGTIFSDPSVETENIAKAQREDPLYMSSCWGILWHHYDYQGENRRKGTRLQMIVPEVMRTQILQWAHEGAFGTHVGREKAFEALLEGYWWPNMARDLGHFIRTCSTCQQFK-----DPAPKLRQRVPILKKPMASQPFQTVCIDAC-----TVRSRN-IMLFICQFSGYVEIQ-LMTGPINGRSLSEAYLNCVVLRHSNPMTVVSDNASYQVGGNFAQLLNKLGTKSTPVTSYHAQANGKVERCVSSIKKLLKTVADDNDNLDWTKLVPIAAFAFNTSFNRIIGNKPFFLVTGREP 2342
            F++ +V+V K+D  +  C+D R LN+IT    +P+P   +  D L  + ++SS+D R  YW +P+ E+D+ KT+F   +  Y + +M FGL NAPATF  +++ + +G ++   LC+LDD++ +S  +F +HLE L ++   L  ANL+L   KC F A  +  LGH+ S+ G++PDP KI+AV    RP  +K+ RS LGL+SY+R F+ GFA++A+PL  LLK  +  T  W+ +CE +F +LK +LTS P L   + +   V+ TDAS  G+GA+LLQ  D       AYASRS S  E+NY+ TE ECL  ++A+  FR Y+ G  F +VTDH AL  L  +K   GR+ RW + L EYD+ +VY+SG+ +  AD LSR  LP+  +I                                   +RQ+  L   I           A+++R+   Y       L +   Y+      G R  +++P  +   +L+  H+     H+G  K +  + E Y+WP M   +  ++ +C  CQ+ K      P   L  R P       SQPF+ V ID       TV  +  ++  +   + Y E   L TG  +   +++ +++ ++LRH  P  ++SD     +     ++L        P ++YH Q NG  ER   ++  ++ T    +D+ +W  ++P   +A+NT+     G  PF LV  R+P
Sbjct:   72 FSSPVVLVKKKDGGIRFCIDYRELNEITRKDLYPMPRIDDALDSLQGAEYFSSLDLRSGYWQIPVNEEDKEKTAFVTPDGLYEFNVMPFGLCNAPATFERMIDNILRGLKWKTCLCYLDDIVIFSS-NFEEHLERLSQVLSCLSAANLQLNTKKCTFAAKTIKILGHVISKHGIRPDPDKIKAVSDFPRPQRQKEWRSFLGLSSYFRHFIRGFATIAAPLNNLLKNNS--TFTWSPECESAFTSLKAALTSDPVLRHSNNNSATVLHTDASGYGIGAILLQPDDSCVEHVIAYASRSLSKPEQNYTITEKECLAVVWAIAKFRLYLYGRHFSVVTDHHALCWLASLKNLLGRLGRWALRLQEYDYTIVYKSGRKHQDADALSRCPLPQPSTITTILNLETSPSPTDLFYGIGIATQ-----------QRQDAQLRSIIAQMEGTSPTTNARSRRQLLHYQ------LQNDVLYRRNYSPHGHRWLLVIPRTLHALVLESLHDDPTAGHLGLFKTYCRVRERYFWPGMYTAVTKYVSSCLVCQKHKCRTTAPPGQLLPPRCP-------SQPFEIVEIDLFGPLPRTVNGKRWVVTAVDHLTRYAETAALPTG--SATEVADFFVHQLLLRHGAPRVLLSDRGRTFLSQTVQEVLAACAVIHKPTSAYHPQTNGLTERFHRTLAHMIATYVS-SDHTNWDAILPFVTYAYNTAIQSTTGYSPFELVHARQP 771          
BLAST of mRNA_H-akashiwo_Contig123.24.1 vs. uniprot
Match: L7LY95_RHIPC (RNA-directed DNA polymerase n=1 Tax=Rhipicephalus pulchellus TaxID=72859 RepID=L7LY95_RHIPC)

HSP 1 Score: 403 bits (1035), Expect = 7.260e-122
Identity = 236/721 (32.73%), Postives = 374/721 (51.87%), Query Frame = 3
Query:  204 ALIVMVGKRDQSVCLCMDLRGLNKITETVKFPLPTPREMFDQLANSWWYSSMDCRWAYWSVPLREQDQAKTSFTIRNRKYCWKMMCFGLKNAPATFSHLMNKVFQGCQYDFALCFLDDVLCYSGKDFNQHLEHLEEIFRRLKVANLKLKLPKCWFGADQLPFLGHIASREGLKPDPKKIEAVRRLRRPGSKKQVRSLLGLASYYRQFVPGFASMASPLYQLLKKEAPRTIQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMMVIETDASSTGLGAVLLQETDLGRQPNAYASRSCSPQEKNYSATEIECLGAIFALKTFRCYVIGSRFRLVTDHQALKNLKLVKKPSGRVARWLMTLLEYDFELVYRSGKLNTTADCLSRLP--RADSIDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYQRPRRQEEILSGTIFSDPSVETENIAKAQREDPLYMSSCWGILWHHYDYQGENRRKGTRLQMIVPEVMRTQILQWAHEGAFGTHVGREKAFEALLEGYWWPNMARDLGHFIRTCSTCQQFKDPAPKLRQRVPILKKPMASQPFQTVCIDAC-----TVRSRN-IMLFICQFSGYVEIQLMTGPINGRSLSEAYLNCVVLRHSNPMTVVSDNASYQVGGNFAQLLNKLGTKSTPVTSYHAQANGKVERCVSSIKKLLKTVADDNDNLDWTKLVPIAAFAFNTSFNRIIGNKPFFLVTGREP 2342
            A +++V K+D S   C+D R LN +T+   +PLP   +  D L ++ ++SS+D R  YW +P+   D+ KT+F   +  + + +M FGL NAPATF   M+ + +G +++  +C+LDDV+ + G+ F++H + L  +   +K A L L   KC FG  Q   LG++  ++G++PDP KI AVR  + P + K +RS LGL SY+R+F+ GFA +A PL  LL+K+ P   QWT  CE +F+ LK  LTS P L   D   +  + TDAS  G+GAVL+Q     +   AYASR+ +  E+NY+ TE+ECL  +FA++ FR Y+ G RF++VTDH +L  L  ++ P+GR+ARW + L EY+F + Y+SG+ +  ADCLSRLP    D+ DD                            + QR     +I+  T  S+ +             P  +    G+L     Y+      G  L ++VPE +R  + +  H+     H G  +    + + ++WP + +    ++ +C  CQ+ K P+      +  L+ P  + PF+ V ID       +V  R  I++ +   + Y E   +    +   +S   L+ ++LRH  P  V+SD           +LL   G      + YH Q NG  ER   +I  +L       D+ +W  ++P   +AFNT+ + + G  PFFL+  R P
Sbjct:  334 APVILVKKKDNSWRFCVDYRRLNAVTKKDVYPLPRIDDALDCLHSAAYFSSVDLRSGYWQIPMHPSDREKTAFVTPDGLFEFNVMPFGLCNAPATFERFMDSILRGLKWETCMCYLDDVIIF-GRTFHEHNQRLSVVLDCVKQAGLILNAKKCHFGERQALVLGYLVDKDGIRPDPHKITAVRNFKPPTTVKDLRSFLGLCSYFRRFIKGFAQLAHPLTDLLRKDTP--YQWTVQCEAAFEQLKFLLTSGPLLRHFDPEALTELHTDASGVGVGAVLVQFHGGSQHVIAYASRTLTKAERNYTVTELECLAVVFAVQKFRPYLYGRRFKIVTDHHSLCWLAGLRDPAGRLARWALRLQEYNFSVAYKSGRCHADADCLSRLPSHNVDTDDDDFDNYLATIYSDFPSLDAFGH-------EQQRDPSLRQIIDATRNSECAT------------PFAIQD--GLL-----YRKNYSSNGAPLLLVVPECLRLAVFRAMHDDITSGHFGFARTLHRIRQRFYWPRLWKTTKQYVASCDVCQRHKQPSTPPAGPLQPLRPP--TSPFEKVGIDLLGPFPKSVTGRRWIIVCVDYLTRYTETMAVASATSS-DVSWFLLHSIILRHGAPRVVISDRGRQFTADVVEELLRLCGCHYRHSSPYHPQTNGLTERTNRTITNMLSMYVSA-DHKNWDAVLPFVTYAFNTAKHEVTGYTPFFLLYARHP 1021          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig123.24.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3XV63_HETAK6.110e-22356.99Hypothetical protein (Fragment) n=3 Tax=Heterosigm... [more]
A0A7S3XVA0_HETAK1.670e-18067.75Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S3XU57_HETAK1.600e-15567.29Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A131XQ77_IXORI6.070e-12733.92RNA-directed DNA polymerase (Fragment) n=1 Tax=Ixo... [more]
L7MA76_RHIPC5.900e-12633.75RNA-directed DNA polymerase (Fragment) n=1 Tax=Rhi... [more]
A0A6S7JC88_PARCT4.340e-12434.38Transposon Ty3-G Gag-Pol poly n=6 Tax=Paramuricea ... [more]
L7MCS8_RHIPC3.640e-12232.37RNA-directed DNA polymerase (Fragment) n=1 Tax=Rhi... [more]
L7LW12_RHIPC3.900e-12232.52RNA-directed DNA polymerase n=1 Tax=Rhipicephalus ... [more]
A0A6B0VG58_IXORI5.090e-12232.74RNA-directed DNA polymerase (Fragment) n=1 Tax=Ixo... [more]
L7LY95_RHIPC7.260e-12232.73RNA-directed DNA polymerase n=1 Tax=Rhipicephalus ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig123contigH-akashiwo_Contig123:1416811..1419230 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog7668.SPU_003372-tr
PFAMsRVT_1,SCAN,gag-asp_proteas,rve,zf-CCHC,zf-H2C2
Model size2342
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.62e-110
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,38F42@33154|Opisthokonta,3BA5H@33208|Metazoa,3CWAK@33213|Bilateria
DescriptionK02A2.6-like
Cds size2127
COG categoryE
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387127.518987-CDS-H-akashiwo_Contig123:1416810..14175911681387127.518987-CDS-H-akashiwo_Contig123:1416810..1417591Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig123 1416811..1417591 -
1681387127.5354252-CDS-H-akashiwo_Contig123:1417669..14190151681387127.5354252-CDS-H-akashiwo_Contig123:1417669..1419015Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig123 1417670..1419015 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387127.5455093-UTR-H-akashiwo_Contig123:1419015..14192301681387127.5455093-UTR-H-akashiwo_Contig123:1419015..1419230Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig123 1419016..1419230 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig123.24.1prot_H-akashiwo_Contig123.24.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig123 1416811..1419015 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig123.24.1

>prot_H-akashiwo_Contig123.24.1 ID=prot_H-akashiwo_Contig123.24.1|Name=mRNA_H-akashiwo_Contig123.24.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=709bp
MVGKRDQSVCLCMDLRGLNKITETVKFPLPTPREMFDQLANSWWYSSMDC
RWAYWSVPLREQDQAKTSFTIRNRKYCWKMMCFGLKNAPATFSHLMNKVF
QGCQYDFALCFLDDVLCYSGKDFNQHLEHLEEIFRRLKVANLKLKLPKCW
FGADQLPFLGHIASREGLKPDPKKIEAVRRLRRPGSKKQVRSLLGLASYY
RQFVPGFASMASPLYQLLKKEAPRTIQWTDDCEWSFQTLKDSLTSAPTLA
FPDWSKMMVIETDASSTGLGAVLLQETDLGRQPNAYASRSCSPQEKNYSA
TEIECLGAIFALKTFRCYVIGSRFRLVTDHQALKNLKLVKKPSGRVARWL
MTLLEYDFELVYRSGKLNTTADCLSRLPRADSIDDDQMEEEDDVVPIVAA
TTRAQAALMKKENQYQRPRRQEEILSGTIFSDPSVETENIAKAQREDPLY
MSSCWGILWHHYDYQGENRRKGTRLQMIVPEVMRTQILQWAHEGAFGTHV
GREKAFEALLEGYWWPNMARDLGHFIRTCSTCQQFKDPAPKLRQRVPILK
KPMASQPFQTVCIDACTVRSRNIMLFICQFSGYVEIQLMTGPINGRSLSE
AYLNCVVLRHSNPMTVVSDNASYQVGGNFAQLLNKLGTKSTPVTSYHAQA
NGKVERCVSSIKKLLKTVADDNDNLDWTKLVPIAAFAFNTSFNRIIGNKP
FFLVTGREP
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mRNA from alignment at H-akashiwo_Contig123:1416811..1419230-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig123.24.1 ID=mRNA_H-akashiwo_Contig123.24.1|Name=mRNA_H-akashiwo_Contig123.24.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=2420bp|location=Sequence derived from alignment at H-akashiwo_Contig123:1416811..1419230- (Heterosigma akashiwo CCMP452)
CTACTTTGGGCCTACAAGGAAGTGTTTATTGCCCCGAATAATATTCCAAC TAGGACACCATTGATAACTCACGCAATTCAGAGTGAAGGTGTCAGCTTTA CAAAGCCTTTCAGAATGCCGCCTGCTCAGCTTAAAAAAGCTGAAGAAATT GCGGAAGAGCGTTTGCAACAAGGAGTCATAAGAGAGAGCTCTTCGAGTTT AACGCCCTAATAGTCATGGTAGGTAAAAGAGACCAATCGGTCTGCCTTTG TATGGACTTGCGAGGGCTGAATAAAATAACCGAAACAGTGAAGTTCCCAC TTCCAACACCTAGAGAAATGTTTGACCAGTTGGCAAACAGCTGGTGGTAC AGTTCTATGGACTGTAGATGGGCTTACTGGAGCGTTCCTTTAAGAGAACA AGACCAAGCCAAAACAAGCTTCACTATAAGGAATCGGAAATATTGCTGGA AGATGATGTGCTTTGGACTAAAAAATGCCCCAGCAACGTTCTCACACCTG ATGAACAAAGTATTTCAAGGCTGTCAATATGACTTTGCTCTGTGCTTCTT AGATGATGTGCTCTGTTACAGTGGAAAAGACTTCAATCAACACTTAGAGC ATCTGGAAGAAATATTCCGCAGACTGAAGGTTGCTAACCTCAAATTGAAG CTTCCTAAATGTTGGTTTGGGGCAGATCAACTACCCTTTCTTGGTCATAT TGCTTCTAGAGAGGGACTAAAGCCTGACCCCAAAAAGATTGAAGCAGTAA GAAGACTGCGGCGTCCTGGCTCAAAGAAGCAGGTGCGGTCTTTACTAGGC TTGGCTTCGTACTATAGACAGTTTGTGCCCGGATTTGCGTCTATGGCAAG CCCATTGTATCAGCTTCTAAAAAAGGAGGCACCAAGAACTATTCAATGGA CAGATGACTGTGAATGGTCATTCCAAACTTTGAAAGATAGTCTGACATCA GCTCCAACTTTGGCCTTTCCTGACTGGTCTAAAATGATGGTGATCGAAAC TGATGCTAGTAGCACGGGTTTGGGGGCAGTACTCCTGCAAGAAACTGACT TGGGAAGACAACCTAATGCGTATGCAAGCAGATCTTGCTCCCCCCAAGAG AAAAATTACAGTGCAACAGAAATTGAGTGCCTAGGAGCAATTTTTGCTTT GAAGACATTTAGGTGTTATGTCATTGGCTCGAGGTTTCGCCTTGTAACAG ATCACCAGGCGTTGAAAAACCTGAAGTTGGTAAAGAAGCCCTCTGGAAGA GTGGCAAGATGGCTGATGACCTTATTAGAATACGACTTTGAGCTGGTCTA CAGGAGCGGGAAACTCAACACAACTGCTGATTGTCTTTCAAGACTTCCGA GAGCAGACAGTATTGATGATGATCAAATGGAAGAAGAAGATGATGTTGTT CCTATTGTGGCAGCTACAACTAGAGCACAAGCAGCACTCATGAAAAAGGA AAATCAATACCAGCGACCAAGAAGACAGGAAGAAATTTTGTCAGGCACTA TATTCAGCGATCCTTCGGTGGAGACTGAGAATATTGCAAAAGCACAAAGG GAAGATCCTCTGTGTGGGCCAATAATTAAATATCTGAGCAAGGAAGTTTC AGATGGCGAAACAAGCCAGGAAACAGTGGCCCTTAGTAGATACATGTCTT CATGCTGGGGAATACTTTGGCACCATTATGACTATCAAGGTGAAAATAGG CGCAAGGGCACAAGATTACAAATGATTGTGCCTGAAGTGATGCGCACTCA AATTTTACAATGGGCACATGAAGGAGCTTTTGGGACTCACGTAGGAAGAG AAAAAGCCTTTGAAGCTCTACTTGAAGGATATTGGTGGCCTAATATGGCT CGAGACTTGGGCCATTTCATAAGAACTTGTTCTACATGCCAGCAATTCAA AGATCCGGCTCCAAAACTGAGACAGAGAGTGCCGATTTTAAAGAAGCCTA TGGCCTCCCAACCTTTCCAAACAGTCTGCATAGATGCGTGCACTGTCAGA TCAAGGAATATTATGCTTTTTATTTGCCAATTCAGTGGATATGTGGAGAT TCAGCTGATGACAGGACCTATCAATGGGAGATCCCTCTCTGAAGCATATC TAAACTGTGTGGTACTCAGGCATTCTAACCCTATGACAGTGGTATCAGAC AACGCATCTTACCAAGTTGGGGGCAATTTTGCCCAGCTTCTCAACAAATT GGGGACCAAGTCAACCCCAGTAACAAGTTACCACGCGCAGGCCAATGGCA AGGTCGAGCGATGCGTGTCTTCCATTAAGAAACTCTTAAAGACTGTAGCA GATGATAATGATAATCTGGATTGGACAAAACTGGTACCAATAGCAGCTTT CGCTTTCAACACCAGTTTTAACAGAATCATTGGAAACAAGCCCTTTTTCT TGGTCACAGGGAGAGAACCA
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Coding sequence (CDS) from alignment at H-akashiwo_Contig123:1416811..1419230-

>mRNA_H-akashiwo_Contig123.24.1 ID=mRNA_H-akashiwo_Contig123.24.1|Name=mRNA_H-akashiwo_Contig123.24.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=2127bp|location=Sequence derived from alignment at H-akashiwo_Contig123:1416811..1419230- (Heterosigma akashiwo CCMP452)
ATGGTAGGTAAAAGAGACCAATCGGTCTGCCTTTGTATGGACTTGCGAGG
GCTGAATAAAATAACCGAAACAGTGAAGTTCCCACTTCCAACACCTAGAG
AAATGTTTGACCAGTTGGCAAACAGCTGGTGGTACAGTTCTATGGACTGT
AGATGGGCTTACTGGAGCGTTCCTTTAAGAGAACAAGACCAAGCCAAAAC
AAGCTTCACTATAAGGAATCGGAAATATTGCTGGAAGATGATGTGCTTTG
GACTAAAAAATGCCCCAGCAACGTTCTCACACCTGATGAACAAAGTATTT
CAAGGCTGTCAATATGACTTTGCTCTGTGCTTCTTAGATGATGTGCTCTG
TTACAGTGGAAAAGACTTCAATCAACACTTAGAGCATCTGGAAGAAATAT
TCCGCAGACTGAAGGTTGCTAACCTCAAATTGAAGCTTCCTAAATGTTGG
TTTGGGGCAGATCAACTACCCTTTCTTGGTCATATTGCTTCTAGAGAGGG
ACTAAAGCCTGACCCCAAAAAGATTGAAGCAGTAAGAAGACTGCGGCGTC
CTGGCTCAAAGAAGCAGGTGCGGTCTTTACTAGGCTTGGCTTCGTACTAT
AGACAGTTTGTGCCCGGATTTGCGTCTATGGCAAGCCCATTGTATCAGCT
TCTAAAAAAGGAGGCACCAAGAACTATTCAATGGACAGATGACTGTGAAT
GGTCATTCCAAACTTTGAAAGATAGTCTGACATCAGCTCCAACTTTGGCC
TTTCCTGACTGGTCTAAAATGATGGTGATCGAAACTGATGCTAGTAGCAC
GGGTTTGGGGGCAGTACTCCTGCAAGAAACTGACTTGGGAAGACAACCTA
ATGCGTATGCAAGCAGATCTTGCTCCCCCCAAGAGAAAAATTACAGTGCA
ACAGAAATTGAGTGCCTAGGAGCAATTTTTGCTTTGAAGACATTTAGGTG
TTATGTCATTGGCTCGAGGTTTCGCCTTGTAACAGATCACCAGGCGTTGA
AAAACCTGAAGTTGGTAAAGAAGCCCTCTGGAAGAGTGGCAAGATGGCTG
ATGACCTTATTAGAATACGACTTTGAGCTGGTCTACAGGAGCGGGAAACT
CAACACAACTGCTGATTGTCTTTCAAGACTTCCGAGAGCAGACAGTATTG
ATGATGATCAAATGGAAGAAGAAGATGATGTTGTTCCTATTGTGGCAGCT
ACAACTAGAGCACAAGCAGCACTCATGAAAAAGGAAAATCAATACCAGCG
ACCAAGAAGACAGGAAGAAATTTTGTCAGGCACTATATTCAGCGATCCTT
CGGTGGAGACTGAGAATATTGCAAAAGCACAAAGGGAAGATCCTCTATAC
ATGTCTTCATGCTGGGGAATACTTTGGCACCATTATGACTATCAAGGTGA
AAATAGGCGCAAGGGCACAAGATTACAAATGATTGTGCCTGAAGTGATGC
GCACTCAAATTTTACAATGGGCACATGAAGGAGCTTTTGGGACTCACGTA
GGAAGAGAAAAAGCCTTTGAAGCTCTACTTGAAGGATATTGGTGGCCTAA
TATGGCTCGAGACTTGGGCCATTTCATAAGAACTTGTTCTACATGCCAGC
AATTCAAAGATCCGGCTCCAAAACTGAGACAGAGAGTGCCGATTTTAAAG
AAGCCTATGGCCTCCCAACCTTTCCAAACAGTCTGCATAGATGCGTGCAC
TGTCAGATCAAGGAATATTATGCTTTTTATTTGCCAATTCAGTGGATATG
TGGAGATTCAGCTGATGACAGGACCTATCAATGGGAGATCCCTCTCTGAA
GCATATCTAAACTGTGTGGTACTCAGGCATTCTAACCCTATGACAGTGGT
ATCAGACAACGCATCTTACCAAGTTGGGGGCAATTTTGCCCAGCTTCTCA
ACAAATTGGGGACCAAGTCAACCCCAGTAACAAGTTACCACGCGCAGGCC
AATGGCAAGGTCGAGCGATGCGTGTCTTCCATTAAGAAACTCTTAAAGAC
TGTAGCAGATGATAATGATAATCTGGATTGGACAAAACTGGTACCAATAG
CAGCTTTCGCTTTCAACACCAGTTTTAACAGAATCATTGGAAACAAGCCC
TTTTTCTTGGTCACAGGGAGAGAACCA
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