mRNA_H-akashiwo_Contig123.24.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig123.24.1 vs. uniprot
Match: A0A7S3XV63_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV63_HETAK) HSP 1 Score: 650 bits (1678), Expect = 6.110e-223 Identity = 318/558 (56.99%), Postives = 393/558 (70.43%), Query Frame = 3
Query: 198 FNALIVMVGKRDQSVCLCMDLRGLNKITETVKFPLPTPREMFDQLANSWWYSSMDCRWAYWSVPLREQDQAKTSFTIRNRKYCWKMMCFGLKNAPATFSHLMNKVFQGCQYDFALCFLDDVLCYSGKDFNQHLEHLEEIFRRLKVANLKLKLPKCWFGADQLPFLGHIASREGLKPDPKKIEAVRRLRRPGSKKQVRSLLGLASYYRQFVPGFASMASPLYQLLKKEAPRTIQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMMVIETDASSTGLGAVLLQETDLGRQPNAYASRSCSPQEKNYSATEIECLGAIFALKTFRCYVIGSRFRLVTDHQALKNLKLVKKPSGRVARWLMTLLEYDFELVYRSGKLNTTADCLSRLPRADSIDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYQRPR-----RQEEILSGTIFSDPSVETENIAKAQREDPL--------------------------YMSSCWGILWHHYDYQGENRRKGTRLQMIVPEVMRTQILQWAHEGAFGTHVGREKAFEALLEGYWWPNMARD 1778
FNA IVMV K+ +C+DLR LN IT KFPLPT REMFD LA +++++S+D WAYWSVPLRE D++KT+FT+RNRKY + +MCFGL NAPATFSHL+NKVFQGCQY+FALCFLDDVLCYS ++F HL HL +IF+R++ ANLK KLPKC FGA Q+PFLGH+ASREGLKPDPKKIEAVR+LRRP SKKQVR LLGLASYYRQFVP FAS+A+PLY+L K + P+ + W DDCEW+FQ +KDSLTSAP L +P W K ++ETDAS TGLGA+LLQ+T G +P AYASR CSP E NYSATE+ECLG I+AL+ FRCYV+G F LVTDH++L++LK +K P+GR ARWLMTL+E+ + YR GKL AD LSRLPRA +I +R R +E +S T + E+I+KAQ+ED YM G+LWH Y+YQG+NRR+GTR+Q++VP + +LQWAH+GAFG H+GR+KA E L +GY+W NMARD
Sbjct: 133 FNAPIVMVAKKSGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREGLKPDPKKIEAVRKLRRPESKKQVRQLLGLASYYRQFVPNFASIAAPLYKLTK-DKPKGVLWDDDCEWAFQEIKDSLTSAPVLMYPRWDKPFIVETDASKTGLGAILLQQTQRGTRPIAYASRLCSPTEANYSATELECLGVIYALQQFRCYVMGREFTLVTDHKSLEDLKRIKNPTGRRARWLMTLMEFMYNTQYRKGKLMAPADALSRLPRAGAIQPKEGEADDENIVAAITRAQAGEAQQLKKQTRKRTRMVTEEEPQEKMSETEEKQLGIRPEDISKAQQEDEFCGPIMEYLKTPGGNKTVSREIVHWSRYMILEKGLLWHQYEYQGDNRRRGTRIQLVVPTALHEVMLQWAHQGAFGAHIGRDKALEILRQGYFWVNMARD 689
BLAST of mRNA_H-akashiwo_Contig123.24.1 vs. uniprot
Match: A0A7S3XVA0_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVA0_HETAK) HSP 1 Score: 535 bits (1378), Expect = 1.670e-180 Identity = 250/369 (67.75%), Postives = 303/369 (82.11%), Query Frame = 3
Query: 198 FNALIVMVGKRDQSVCLCMDLRGLNKITETVKFPLPTPREMFDQLANSWWYSSMDCRWAYWSVPLREQDQAKTSFTIRNRKYCWKMMCFGLKNAPATFSHLMNKVFQGCQYDFALCFLDDVLCYSGKDFNQHLEHLEEIFRRLKVANLKLKLPKCWFGADQLPFLGHIASREGLKPDPKKIEAVRRLRRPGSKKQVRSLLGLASYYRQFVPGFASMASPLYQLLKKEAPRTIQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMMVIETDASSTGLGAVLLQETDLGRQPNAYASRSCSPQEKNYSATEIECLGAIFALKTFRCYVIGSRFRLVTDHQALKNLKLVKKPSGRVARWLMTLLEYDFELVYR 1304
FNA IVMV K+ +C+DLR LN IT KFPLPT REMFD LA +++++S+D WAYWSVPLRE D++KT+FT+RNRKY + +MCFGL NAPATFSHL+NKVFQGCQY+FALCFLDDVLCYS ++F HL HL +IF+R++ ANLK KLPKC FGA Q+PFLGH+ASREGLKPDPKKIEAVR+LRRP SKKQVR LLGLASYYRQFVP FAS+A+PLY+L K + P+ + W DDCEW+FQ +KDSLTSAP L +P W K ++ETDAS TGLGA+LLQ+T G +P AYASR CSP E NYSATE+ECLG I+AL+ FRCYV+G F LVTDH++L++LK +K P+GR ARWLMTL+E+ + YR
Sbjct: 133 FNAPIVMVAKKSGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREGLKPDPKKIEAVRKLRRPESKKQVRQLLGLASYYRQFVPNFASIAAPLYKLTK-DKPKGVLWDDDCEWAFQEIKDSLTSAPVLMYPRWDKPFIVETDASKTGLGAILLQQTQRGTRPIAYASRLCSPTEANYSATELECLGVIYALQQFRCYVMGREFTLVTDHKSLEDLKRIKNPTGRRARWLMTLMEFMYNTQYR 500
BLAST of mRNA_H-akashiwo_Contig123.24.1 vs. uniprot
Match: A0A7S3XU57_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU57_HETAK) HSP 1 Score: 464 bits (1194), Expect = 1.600e-155 Identity = 216/321 (67.29%), Postives = 265/321 (82.55%), Query Frame = 3
Query: 216 MVGKRDQSVCLCMDLRGLNKITETVKFPLPTPREMFDQLANSWWYSSMDCRWAYWSVPLREQDQAKTSFTIRNRKYCWKMMCFGLKNAPATFSHLMNKVFQGCQYDFALCFLDDVLCYSGKDFNQHLEHLEEIFRRLKVANLKLKLPKCWFGADQLPFLGHIASREGLKPDPKKIEAVRRLRRPGSKKQVRSLLGLASYYRQFVPGFASMASPLYQLLKKEAPRTIQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMMVIETDASSTGLGAVLLQETDLGRQPNAYASRSCSPQEKNYSATEIECLGAIFALKTFRCYVIG 1178
MV K+ +C+DLR LN IT KFPLPTPREMFDQL ++++SS+D WAYWSVPLR++D+ KT+FT+RN+KY + +MCFGL NAPATFSHL+NKVFQGCQ+DFALCFLDDVLCY+G DF+ HL LEEIF R+ ANLK KLPKC FGA Q+PFLGHIA+REGLKPDPKKIEA+++L+RP +KKQVR +LGLASYYRQFVP FA+ A+PLY L KKE P+ ++WTDDCEW+FQ LKD+LT+AP L FP+++K IETDAS GLGA+L Q+T GR+P AYASR C+ E NYSATE+ECLG IF ++ FRCY++G
Sbjct: 1 MVKKKTGETRMCLDLRSLNAITTPAKFPLPTPREMFDQLEGAYYFSSLDMLWAYWSVPLRDEDKHKTAFTVRNKKYAFNVMCFGLTNAPATFSHLVNKVFQGCQHDFALCFLDDVLCYTGPDFSLHLRQLEEIFIRMIKANLKFKLPKCLFGAAQVPFLGHIATREGLKPDPKKIEAIKKLQRPQTKKQVRQVLGLASYYRQFVPNFAATAAPLYTLTKKE-PKGVEWTDDCEWAFQNLKDTLTTAPILIFPNFNKEFTIETDASKHGLGAILSQDTTEGRKPVAYASRVCNSAEANYSATELECLGVIFGIQQFRCYILG 320
BLAST of mRNA_H-akashiwo_Contig123.24.1 vs. uniprot
Match: A0A131XQ77_IXORI (RNA-directed DNA polymerase (Fragment) n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A131XQ77_IXORI) HSP 1 Score: 410 bits (1055), Expect = 6.070e-127 Identity = 251/740 (33.92%), Postives = 392/740 (52.97%), Query Frame = 3
Query: 210 IVMVGKRDQSVCLCMDLRGLNKITETVKFPLPTPREMFDQLANSWWYSSMDCRWAYWSVPLREQDQAKTSFTIRNRKYCWKMMCFGLKNAPATFSHLMNKVFQGCQYDFALCFLDDVLCYSGKDFNQHLEHLEEIFRRLKVANLKLKLPKCWFGADQLPFLGHIASREGLKPDPKKIEAVRRLRRPGSKKQVRSLLGLASYYRQFVPGFASMASPLYQLLKKEAPRTIQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMMVIETDASSTGLGAVLLQETDLGRQPN--AYASRSCSPQEKNYSATEIECLGAIFALKTFRCYVIGSRFRLVTDHQALKNLKLVKKPSGRVARWLMTLLEYDFELVYRSGKLNTTADCLSRLPR-----ADSIDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYQRPRRQEEILSGTIFSDPSVET------ENIAKAQREDPLY------MSSCWGILWHH-YDYQGENRRKGTRLQMIVPEVMRTQILQWAHEGAFGTHVGREKAFEALLEGYWWPNMARDLGHFIRTCSTCQQFK-DPAPKLRQRVPILKKPMASQPFQTVCIDA------CTVRSRNIMLFICQFSGYVEIQLMTGPI---NGRSLSEAYLNCVVLRHSNPMTVVSDNASYQVGGNFAQLLNKLGTKSTPVTSYHAQANGKVERCVSSIKKLLKTVADDNDNLDWTKLVPIAAFAFNTSFNRIIGNKPFFLVTGRE 2339
+V+V K+D SV C+D R LN IT+ +P+P + D L + +Y+S+D R YW +P+ E D+AKT+F + + + +M FGL NAPATF +++ + +G ++ LC+LDDV+ +S F++HL+ L E+ + A L+L KC F A Q+ LGH+ SR+G++PDP+K+ AV P + KQ++S LGL SY+R+F+ GFA++ASPL LL P +WT DC++SF TL+ L+S P L D + + TDAS TGLGAVLLQ+ R+P+ AYASR+ + EKNY+ TE ECL ++A+ FR Y+ G F +VTDH AL L +K SGR+ RW++ L EY+F ++++SG+ + AD LSR P D IDD P + T+ S + + ++A + +DP + + GIL+ H Y +GE RL +++P+ +R +L H+ H+G K + L Y+WP M R + ++++C CQ K P Q +P+ P +PF V ID + R I++ I + Y E T P+ + +++ +L+ +VLRH P ++SD + + ++L ++YH Q NG ER ++ +++ ND+ +W ++P FA+NTS PFFLV GR+
Sbjct: 92 VVLVRKKDGSVRFCVDYRKLNNITQKDSYPMPRIDDALDTLQGAKYYTSLDLRSGYWQIPMSESDKAKTAFVTPDGLFEFNVMPFGLCNAPATFERMIDSILRGLKWRTCLCYLDDVIVFSST-FDEHLDRLSEVLSCISGAGLQLNTKKCHFAATQIKVLGHLVSRDGIRPDPEKVRAVYSFPHPATSKQLKSFLGLCSYFRRFIRGFANIASPLTHLLSTNVP--YKWTPDCQFSFDTLRKVLSSGPILQHFDETASTELHTDASGTGLGAVLLQKHPSSREPHVIAYASRTLTRPEKNYTVTEQECLAVVWAIGRFRPYLFGRPFTVVTDHNALCWLGSMKNLSGRLGRWILRLQEYNFTVLHKSGRKHLDADGLSRCPLPPNFVTDVIDDD-------------------------------PPTVSSLTPTTLVSSQAQDPWCARIIHHLA-SPLQDPKFHRKIRNFTRLNGILYKHSYIPEGE------RLLLVIPKPLRRTVLAAFHDDPTAGHLGTYKTYARLRSRYFWPGMYRAVEKYVQSCVPCQTRKTSPHASDGQLMPL---PCPKRPFDRVGIDLYGPLPMSSAGHRWIVVAIDHLTRYAE----TAPLISATAQEIAQFFLSSIVLRHGAPRFLLSDRGTAFLSALVQEVLAASRVIHQLTSAYHPQTNGLTERFNRTLSQMVSMYIS-NDHRNWHSILPFITFAYNTSVQSTTRFSPFFLVYGRD 782
BLAST of mRNA_H-akashiwo_Contig123.24.1 vs. uniprot
Match: L7MA76_RHIPC (RNA-directed DNA polymerase (Fragment) n=1 Tax=Rhipicephalus pulchellus TaxID=72859 RepID=L7MA76_RHIPC) HSP 1 Score: 414 bits (1064), Expect = 5.900e-126 Identity = 245/726 (33.75%), Postives = 380/726 (52.34%), Query Frame = 3
Query: 210 IVMVGKRDQSVCLCMDLRGLNKITETVKFPLPTPREMFDQLANSWWYSSMDCRWAYWSVPLREQDQAKTSFTIRNRKYCWKMMCFGLKNAPATFSHLMNKVFQGCQYDFALCFLDDVLCYSGKDFNQHLEHLEEIFRRLKVANLKLKLPKCWFGADQLPFLGHIASREGLKPDPKKIEAVRRLRRPGSKKQVRSLLGLASYYRQFVPGFASMASPLYQLLKKEAPRTIQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMMVIETDASSTGLGAVLLQETDLG-RQPNAYASRSCSPQEKNYSATEIECLGAIFALKTFRCYVIGSRFRLVTDHQALKNLKLVKKPSGRVARWLMTLLEYDFELVYRSGKLNTTADCLSRLPRADS----IDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYQRP--RRQEEILSGTIFSDPSVETENIAKAQREDPLYMSSCWGILWHHYDYQGENRRKGTRLQMIVPEVMRTQILQWAHEGAFGTHVGREKAFEALLEGYWWPNMARDLGHFIRTCSTCQQFKDPAPKLRQRVPILKKPMASQPFQTVCID------ACTVRSRNIMLFICQFSGYVEIQLMTGPINGRSLSEA--YLNCVVLRHSNPMTVVSDNASYQVGGNFAQLLNKLGTKSTPVTSYHAQANGKVERCVSSIKKLLKTVADDNDNLDWTKLVPIAAFAFNTSFNRIIGNKPFFLVTGREP 2342
+V+V K+D SV C+D R LNKIT +P+P + D L + ++SS+D R YW +P+ E D+ KT+F + Y + +M FGL NAPATF +++ V +G ++ LC+LDD++ +S F QHL+ L+E+ L A L+L KC F + LGH+ S++G++PDP KI AV R RP K++RS LGLASY+R+F+ FAS+A+PL+QLL + P W+D+C+ +F LK +LTS P L D + ++ TDAS G+GAVLLQ + + AYASR+ + EKNY+ TE ECL +++++ FR Y+ G F +VTDH AL L +K SGR+ RW + L EYDF+++Y+SG+ + AD LSR P + + Q P RR LSG + + + + E+ G+L+ H + G R ++P +R +L+ H+ H+G +K + + ++WP ++ + ++ +C CQ+ K P P+ P + PF+ V +D A + R I+ + + Y E T + G ++ A L+ +VLRH P ++SD + ++L GT +SYH Q NG ER ++ ++ V D+ +W L+P FA+NT+ R G PF+LV GR P
Sbjct: 337 VVLVRKKDGSVRFCVDYRALNKITRKDVYPMPRIDDALDSLQGAEYFSSLDLRSGYWQIPMHEDDKEKTAFATPDGLYEFNVMPFGLCNAPATFERMIDTVLRGLKWKTCLCYLDDIVIFSST-FPQHLQRLDEVLTCLASAGLQLNTKKCCFATKSIKVLGHVVSKDGIRPDPDKIAAVLRFPRPERPKELRSFLGLASYFRRFIQHFASIAAPLHQLLASDVP--FLWSDECQTAFDLLKGALTSEPVLCHFDEAAPTILHTDASGRGVGAVLLQRDNSSLERVVAYASRALTAAEKNYTITEQECLAVVWSVQKFRPYLHGRHFTIVTDHHALCWLSTLKNLSGRLGRWTLRLQEYDFDIIYKSGRKHQDADALSRCPLPSTQIKVAESSAVTSTAVPSLASIDQLFSDDEPTFSSHQLSDPYCRRIMGHLSGASHPPNARLRRQLLQFRLEN--------GVLYRHIYHPD-----GQRWVPVLPRSLRLHVLKAFHDDLTAGHLGFQKTLDRIRCRFYWPGLSTSVARYVGSCFPCQRRK--LPTSAPAGPLQPIPCPTMPFEVVGVDLYGPLPATSTGKRWIVTAVDHLTRYAET---TSVVTGSAVEVADFVLHAIVLRHGAPRILLSDRGRVFLSQLLHEVLRASGTTHKTASSYHPQTNGLTERFHRTLADMI-AVYIQPDHKNWDTLLPFLTFAYNTAVQRTTGYSPFYLVYGRPP 1040
BLAST of mRNA_H-akashiwo_Contig123.24.1 vs. uniprot
Match: A0A6S7JC88_PARCT (Transposon Ty3-G Gag-Pol poly n=6 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JC88_PARCT) HSP 1 Score: 407 bits (1045), Expect = 4.340e-124 Identity = 252/733 (34.38%), Postives = 373/733 (50.89%), Query Frame = 3
Query: 210 IVMVGKRDQSVCLCMDLRGLNKITETVKFPLPTPREMFDQLANSWWYSSMDCRWAYWSVPLREQDQAKTSFTIRNRKYCWKMMCFGLKNAPATFSHLMNKVFQGCQYDFALCFLDDVLCYSGKDFNQHLEHLEEIFRRLKVANLKLKLPKCWFGADQLPFLGHIASREGLKPDPKKIEAVRRLRRPGSKKQVRSLLGLASYYRQFVPGFASMASPLYQLLKKEAPRTIQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMMVIETDASSTGLGAVLLQETDLGRQPNAYASRSCSPQEKNYSATEIECLGAIFALKTFRCYVIGSRFRLVTDHQALKNLKLVKKPSGRVARWLMTLLEYDFELVYRSGKLNTTADCLSRLPRAD--SIDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYQRPRRQEEILSGTIFSD-PSVETENIAKAQREDPLYMSSCW-------GILWHHYDYQGENRRKGT---RLQMIVPEVMRTQILQWAHEGAFGTHVGREKAFEALLEGYWWPNMARDLGHFIRTCSTCQQFKDPAPKLRQRVPILKKPMAS----QPFQTVCIDAC-----TVRSRNIMLFICQ-FSGYVEIQLMTGPINGRSLSEAYLNCVVLRHSNPMTVVSDNASYQVGGNFAQLLNKLGTKSTPVTSYHAQANGKVERCVSSIKKLLKTVADDNDNLDWTKLVPIAAFAFNTSFNRIIGNKPFFLVTGRE 2339
IV+ K+D C+D R +N +T+ P+P E+ DQL + ++S++D YW VPLRE+D KT+F++ Y + +M FGL NAPATF +M + G + L F+DD++ +S + +H L+E+FRR++ A LK+K KC F + + FLGHI S G +PD K+EAVR P S VR+ +G+ASYYR+F+ FA +A+PL+ L K P WT + +F LK L SAP L+ PD+S I TDAS GLGAVL Q AYASR+ + EKNYS TE ECL ++ + +R Y++G+ F +VTDHQ+L L+ +K+P GR+ARW++ L EYDFE+ +R G+ ++ AD LSR PR I D Q P + + D P +N + + W G+L D KGT RL ++VP MR +L+ +H+ H+G + E L Y+WP MA ++ +I C C + K P VP K PM S QP + +D T R +L + F+ +VE M ++++A++N VV RH P +++D Q+ + LG + + YH Q +G+VER ++K +L T + D+ DW +P+A FA+ S + G PF + GRE
Sbjct: 144 IVLAPKKDGDYRFCVDFRRVNSVTKKDAHPMPRIDEILDQLGGARYFSTLDLASGYWQVPLREEDMEKTAFSVGANHYEFTVMPFGLTNAPATFQRMMGNILMGIKG--CLVFMDDIIIFSDT-WEEHQRILDEVFRRIRAAGLKIKRDKCQFAQESVKFLGHIVSARGTEPDSSKVEAVREFATPTSLTDVRAFVGMASYYRRFIKNFADIAAPLHDLTKGGQPEFC-WTPVADKAFNDLKSRLCSAPILSLPDFSVPFTIYTDASDFGLGAVLSQRRGENEYVIAYASRTLTSAEKNYSTTEKECLAIVWTVNYWRPYLLGNTFDIVTDHQSLTWLQGLKEPKGRLARWILALQEYDFEIKHRPGRQHSNADTLSRFPRVTPPQIPDQSVDEDLMVGVNGTEVCTSWSKTEILKAQQDDPSISMIMQKLSCSDDLPEEGNDNDNSKENGERRRYRQLWSQLEMVDGVLHRCVD-------KGTPSKRLVLVVPRKMRCDLLKLSHDDPCSGHMGINRCLERLQRRYYWPGMAAEVQLWIAECEKCNRRKTP-------VPSQKAPMQSIEIGQPMELWAMDVLGPLPMTARGNQYILVMSDHFTKWVEAVPMPNQ-RAETVAKAFVNEVVTRHGVPSKLLTDQGRNFEADLMKQVFSLLGVRKLRTSPYHPQTDGQVERMNRTLKGIL-TAYVNKDHNDWDDHLPLALFAYRNSVHSSSGISPFQAIYGRE 856
BLAST of mRNA_H-akashiwo_Contig123.24.1 vs. uniprot
Match: L7MCS8_RHIPC (RNA-directed DNA polymerase (Fragment) n=1 Tax=Rhipicephalus pulchellus TaxID=72859 RepID=L7MCS8_RHIPC) HSP 1 Score: 402 bits (1032), Expect = 3.640e-122 Identity = 234/723 (32.37%), Postives = 369/723 (51.04%), Query Frame = 3
Query: 204 ALIVMVGKRDQSVCLCMDLRGLNKITETVKFPLPTPREMFDQLANSWWYSSMDCRWAYWSVPLREQDQAKTSFTIRNRKYCWKMMCFGLKNAPATFSHLMNKVFQGCQYDFALCFLDDVLCYSGKDFNQHLEHLEEIFRRLKVANLKLKLPKCWFGADQLPFLGHIASREGLKPDPKKIEAVRRLRRPGSKKQVRSLLGLASYYRQFVPGFASMASPLYQLLKKEAPRTIQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMMVIETDASSTGLGAVLLQETDLGRQPNAYASRSCSPQEKNYSATEIECLGAIFALKTFRCYVIGSRFRLVTDHQALKNLKLVKKPSGRVARWLMTLLEYDFELVYRSGKLNTTADCLSRLPRADSIDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYQRPRRQEEILSGTIFSDPSVETENIAKAQREDPLYMSSCWGILWHHYDYQGENRRKGTRLQMIVPEVMRTQILQWAHEGAFGTHVGREKAFEALLEGYWWPNMARDLGHFIRTCSTCQQFKDP----APKLRQRVPILKKPMASQPFQTVCIDAC------TVRSRNIMLFICQFSGYVEIQLMTGPINGRSLSEAYLNCVVLRHSNPMTVVSDNASYQVGGNFAQLLNKLGTKSTPVTSYHAQANGKVERCVSSIKKLLKTVADDNDNLDWTKLVPIAAFAFNTSFNRIIGNKPFFLVTGREP 2342
A +++V K+D S C+D R LN +T+ +PLP + D L ++ ++SS+D R YW +P+ D+ KT+F + + + +M FGL NAPATF M+ + +G +++ +C+LDDV+ + G+ F++H + L + +K A L L KC FG Q LG++ R G++PDP KI AVR + P + K +RS LGL SY+R+F+ FA +A PL LL+K+ P +WT +CE +F+ LK LTS P L D + + TDAS G+GAVL+Q D + AYASR+ + E NY+ TE+ECL ++A+ FR Y+ G F++VTDH +L L ++ P+GR+ARW + L EY+F + Y+SG+ + ADCLSRLP ++ D +++S DPS+ A + G+L Y+ G L ++VPE +R + + H+ H+G + + + ++WP + + H++ +C CQ+ K P A L+Q P + PF+ V ID + R I++ + + Y E + + +S L+ ++LRH P V+SD +LL G T YH Q NG ER +I +L D+ +W ++P +AFNT+ + + G PFFL+ R P
Sbjct: 256 APVILVKKKDNSWRFCVDYRRLNAVTKKDVYPLPRIDDAVDCLHSAAYFSSVDLRSGYWQIPMHPTDREKTAFVTPDGLFEFNVMPFGLCNAPATFERFMDSILRGLKWETCMCYLDDVIIF-GRTFHEHNQRLSVVLNCIKQAGLILNSKKCHFGERQAVVLGYLVDRNGIRPDPNKITAVRNFKPPKTVKDLRSFLGLCSYFRRFIKDFAQLAHPLTDLLRKDTP--YRWTTECEAAFEQLKFLLTSGPLLHHFDPEALTELHTDASGVGVGAVLVQFHDGRQHVVAYASRALTKAESNYTVTELECLAVVYAIHKFRPYLYGRHFKIVTDHHSLCWLVGLRDPAGRLARWALRLQEYNFSVAYKSGRCHADADCLSRLPSPNTSADDDDFDNYLAAISSDFPSM-------------------DLVSQEQLRDPSLRPVIDATNRSRHATQFVIRDGVL-----YRKNYSSNGAPLLLVVPERLRLAVFRAMHDDITSGHLGFARTLHRIRQRFYWPRLWKTTKHYVASCDVCQRHKQPTALPAGTLQQITP------PTSPFEKVGIDLLGPFPKSSTGRRWIIVCVDYLTRYTETMALASATSS-DVSWFLLHSIILRHGAPRVVISDRGRQFTADVVEELLRLCGCHYRHSTPYHPQTNGLTERTNRTIINMLSMYVSA-DHKNWDAVLPFITYAFNTAKHEVTGYTPFFLLYARHP 943
BLAST of mRNA_H-akashiwo_Contig123.24.1 vs. uniprot
Match: L7LW12_RHIPC (RNA-directed DNA polymerase n=1 Tax=Rhipicephalus pulchellus TaxID=72859 RepID=L7LW12_RHIPC) HSP 1 Score: 402 bits (1034), Expect = 3.900e-122 Identity = 240/738 (32.52%), Postives = 376/738 (50.95%), Query Frame = 3
Query: 204 ALIVMVGKRDQSVCLCMDLRGLNKITETVKFPLPTPREMFDQLANSWWYSSMDCRWAYWSVPLREQDQAKTSFTIRNRKYCWKMMCFGLKNAPATFSHLMNKVFQGCQYDFALCFLDDVLCYSGKDFNQHLEHLEEIFRRLKVANLKLKLPKCWFGADQLPFLGHIASREGLKPDPKKIEAVRRLRRPGSKKQVRSLLGLASYYRQFVPGFASMASPLYQLLKKEAPRTIQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMMVIETDASSTGLGAVLLQETDLGRQPNAYASRSCSPQEKNYSATEIECLGAIFALKTFRCYVIGSRFRLVTDHQALKNLKLVKKPSGRVARWLMTLLEYDFELVYRSGKLNTTADCLSRLP------RADSIDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYQRPRRQEEILSGTIFSDPSVETENIAKAQRED----PLYMSS-----CW----GILWHHYDYQGENRRKGTRLQMIVPEVMRTQILQWAHEGAFGTHVGREKAFEALLEGYWWPNMARDLGHFIRTCSTCQQFKDPAPKLRQRVPILKKPMASQPFQTVCIDAC------TVRSRNIMLFICQFSGYVEIQLMTGPINGRSLSEAYLNCVVLRHSNPMTVVSDNASYQVGGNFAQLLNKLGTKSTPVTSYHAQANGKVERCVSSIKKLLKTVADDNDNLDWTKLVPIAAFAFNTSFNRIIGNKPFFLVTGREP 2342
A +++V K+D + C+D R LN +T+ +PLP ++ D L ++ ++SS+D R YW +P+ D+ KT+F + + + +M FGL NAPATF M+ + +G +++ LC+LDD++ + G+ F++H L+ + L+ A L L KC FG + LGH+ + G++PDP+K+ AV ++P S +++RS LGL SY+R+FVP FA +A PL LL K+ P +W+ +CE SF LK LTS P L D S + TDAS GLGAVL+Q AYASR S E+NY+ TE ECL +FA+ FR Y+ G +F ++TDH +L L ++ PSGR+ARW + L E+DFE+ Y+SG+ + ADCLSRLP AD+ D+ + P + QR D P +MS C+ GIL+ +Y G KG RL ++VP +R +L+ AH+ H+G + F+ + ++WP M R + ++ +C CQ++K P + + + P PF+ V +D T +R I++ + + Y E + +S L+ ++LRH +P ++SD V LL + T YH Q NG ER ++ ++ D W ++P FA+NT+ + PF+L+ R+P
Sbjct: 289 APVILVRKKDGTWRFCVDYRRLNSVTKKDVYPLPRIDDVIDCLHSASYFSSVDLRSGYWQIPMHPNDKEKTAFITPDGLFEFNVMPFGLCNAPATFERFMDTILRGLKWEVCLCYLDDIIIF-GRTFDEHNHRLDTVLTCLERAALTLNSKKCHFGNRETLVLGHLVDKHGVRPDPQKVAAVSSFKQPESIRELRSFLGLCSYFRRFVPKFADLAYPLTCLLNKDVP--FRWSAECESSFSQLKFLLTSGPVLRHYDPSAATEVHTDASGVGLGAVLVQRHGAVEHVVAYASRCLSKPERNYTVTEQECLAVVFAVHKFRPYIYGRQFSVITDHHSLCWLTGLRDPSGRLARWALLLQEHDFEVCYKSGRRHADADCLSRLPLPTTACEADNFDEYL----------------------------------------AVVDAPFPDLATFRTEQRSDSSLAPFFMSRTNGQRCFVVKDGILYKK-NYSG----KGARLLLVVPTSLRRHVLRAAHDEPTSGHMGFSRTFQRTQDRFFWPKMRRSVSAYVASCERCQRYKRPTSEPAGLLHPIAPP--GSPFEVVGVDLLGPFPRSTNGNRWIIVGVDHLTRYAETAAIPAA-TATQVSHFMLSHIILRHGSPRVIISDRGRQFVADVVEDLLRLATSHFRHATPYHPQTNGLTERTNRTLVNMISMYVDSGHKT-WDAVLPFITFAYNTAQHETTRYSPFYLLYVRQP 974
BLAST of mRNA_H-akashiwo_Contig123.24.1 vs. uniprot
Match: A0A6B0VG58_IXORI (RNA-directed DNA polymerase (Fragment) n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A6B0VG58_IXORI) HSP 1 Score: 398 bits (1022), Expect = 5.090e-122 Identity = 239/730 (32.74%), Postives = 379/730 (51.92%), Query Frame = 3
Query: 198 FNALIVMVGKRDQSVCLCMDLRGLNKITETVKFPLPTPREMFDQLANSWWYSSMDCRWAYWSVPLREQDQAKTSFTIRNRKYCWKMMCFGLKNAPATFSHLMNKVFQGCQYDFALCFLDDVLCYSGKDFNQHLEHLEEIFRRLKVANLKLKLPKCWFGADQLPFLGHIASREGLKPDPKKIEAVRRLRRPGSKKQVRSLLGLASYYRQFVPGFASMASPLYQLLKKEAPRTIQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMMVIETDASSTGLGAVLLQETD-LGRQPNAYASRSCSPQEKNYSATEIECLGAIFALKTFRCYVIGSRFRLVTDHQALKNLKLVKKPSGRVARWLMTLLEYDFELVYRSGKLNTTADCLSR--LPRADSIDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYQRPRRQEEILSGTIFSDPSVETENIAKAQREDPLYMSSCWGILWHHYDYQGENRRKGTRLQMIVPEVMRTQILQWAHEGAFGTHVGREKAFEALLEGYWWPNMARDLGHFIRTCSTCQQFK-----DPAPKLRQRVPILKKPMASQPFQTVCIDAC-----TVRSRN-IMLFICQFSGYVEIQ-LMTGPINGRSLSEAYLNCVVLRHSNPMTVVSDNASYQVGGNFAQLLNKLGTKSTPVTSYHAQANGKVERCVSSIKKLLKTVADDNDNLDWTKLVPIAAFAFNTSFNRIIGNKPFFLVTGREP 2342
F++ +V+V K+D + C+D R LN+IT +P+P + D L + ++SS+D R YW +P+ E+D+ KT+F + Y + +M FGL NAPATF +++ + +G ++ LC+LDD++ +S +F +HLE L ++ L ANL+L KC F A + LGH+ S+ G++PDP KI+AV RP +K+ RS LGL+SY+R F+ GFA++A+PL LLK + T W+ +CE +F +LK +LTS P L + + V+ TDAS G+GA+LLQ D AYASRS S E+NY+ TE ECL ++A+ FR Y+ G F +VTDH AL L +K GR+ RW + L EYD+ +VY+SG+ + AD LSR LP+ +I +RQ+ L I A+++R+ Y L + Y+ G R +++P + +L+ H+ H+G K + + E Y+WP M + ++ +C CQ+ K P L R P SQPF+ V ID TV + ++ + + Y E L TG + +++ +++ ++LRH P ++SD + ++L P ++YH Q NG ER ++ ++ T +D+ +W ++P +A+NT+ G PF LV R+P
Sbjct: 72 FSSPVVLVKKKDGGIRFCIDYRELNEITRKDLYPMPRIDDALDSLQGAEYFSSLDLRSGYWQIPVNEEDKEKTAFVTPDGLYEFNVMPFGLCNAPATFERMIDNILRGLKWKTCLCYLDDIVIFSS-NFEEHLERLSQVLSCLSAANLQLNTKKCTFAAKTIKILGHVISKHGIRPDPDKIKAVSDFPRPQRQKEWRSFLGLSSYFRHFIRGFATIAAPLNNLLKNNS--TFTWSPECESAFTSLKAALTSDPVLRHSNNNSATVLHTDASGYGIGAILLQPDDSCVEHVIAYASRSLSKPEQNYTITEKECLAVVWAIAKFRLYLYGRHFSVVTDHHALCWLASLKNLLGRLGRWALRLQEYDYTIVYKSGRKHQDADALSRCPLPQPSTITTILNLETSPSPTDLFYGIGIATQ-----------QRQDAQLRSIIAQMEGTSPTTNARSRRQLLHYQ------LQNDVLYRRNYSPHGHRWLLVIPRTLHALVLESLHDDPTAGHLGLFKTYCRVRERYFWPGMYTAVTKYVSSCLVCQKHKCRTTAPPGQLLPPRCP-------SQPFEIVEIDLFGPLPRTVNGKRWVVTAVDHLTRYAETAALPTG--SATEVADFFVHQLLLRHGAPRVLLSDRGRTFLSQTVQEVLAACAVIHKPTSAYHPQTNGLTERFHRTLAHMIATYVS-SDHTNWDAILPFVTYAYNTAIQSTTGYSPFELVHARQP 771
BLAST of mRNA_H-akashiwo_Contig123.24.1 vs. uniprot
Match: L7LY95_RHIPC (RNA-directed DNA polymerase n=1 Tax=Rhipicephalus pulchellus TaxID=72859 RepID=L7LY95_RHIPC) HSP 1 Score: 403 bits (1035), Expect = 7.260e-122 Identity = 236/721 (32.73%), Postives = 374/721 (51.87%), Query Frame = 3
Query: 204 ALIVMVGKRDQSVCLCMDLRGLNKITETVKFPLPTPREMFDQLANSWWYSSMDCRWAYWSVPLREQDQAKTSFTIRNRKYCWKMMCFGLKNAPATFSHLMNKVFQGCQYDFALCFLDDVLCYSGKDFNQHLEHLEEIFRRLKVANLKLKLPKCWFGADQLPFLGHIASREGLKPDPKKIEAVRRLRRPGSKKQVRSLLGLASYYRQFVPGFASMASPLYQLLKKEAPRTIQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMMVIETDASSTGLGAVLLQETDLGRQPNAYASRSCSPQEKNYSATEIECLGAIFALKTFRCYVIGSRFRLVTDHQALKNLKLVKKPSGRVARWLMTLLEYDFELVYRSGKLNTTADCLSRLP--RADSIDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYQRPRRQEEILSGTIFSDPSVETENIAKAQREDPLYMSSCWGILWHHYDYQGENRRKGTRLQMIVPEVMRTQILQWAHEGAFGTHVGREKAFEALLEGYWWPNMARDLGHFIRTCSTCQQFKDPAPKLRQRVPILKKPMASQPFQTVCIDAC-----TVRSRN-IMLFICQFSGYVEIQLMTGPINGRSLSEAYLNCVVLRHSNPMTVVSDNASYQVGGNFAQLLNKLGTKSTPVTSYHAQANGKVERCVSSIKKLLKTVADDNDNLDWTKLVPIAAFAFNTSFNRIIGNKPFFLVTGREP 2342
A +++V K+D S C+D R LN +T+ +PLP + D L ++ ++SS+D R YW +P+ D+ KT+F + + + +M FGL NAPATF M+ + +G +++ +C+LDDV+ + G+ F++H + L + +K A L L KC FG Q LG++ ++G++PDP KI AVR + P + K +RS LGL SY+R+F+ GFA +A PL LL+K+ P QWT CE +F+ LK LTS P L D + + TDAS G+GAVL+Q + AYASR+ + E+NY+ TE+ECL +FA++ FR Y+ G RF++VTDH +L L ++ P+GR+ARW + L EY+F + Y+SG+ + ADCLSRLP D+ DD + QR +I+ T S+ + P + G+L Y+ G L ++VPE +R + + H+ H G + + + ++WP + + ++ +C CQ+ K P+ + L+ P + PF+ V ID +V R I++ + + Y E + + +S L+ ++LRH P V+SD +LL G + YH Q NG ER +I +L D+ +W ++P +AFNT+ + + G PFFL+ R P
Sbjct: 334 APVILVKKKDNSWRFCVDYRRLNAVTKKDVYPLPRIDDALDCLHSAAYFSSVDLRSGYWQIPMHPSDREKTAFVTPDGLFEFNVMPFGLCNAPATFERFMDSILRGLKWETCMCYLDDVIIF-GRTFHEHNQRLSVVLDCVKQAGLILNAKKCHFGERQALVLGYLVDKDGIRPDPHKITAVRNFKPPTTVKDLRSFLGLCSYFRRFIKGFAQLAHPLTDLLRKDTP--YQWTVQCEAAFEQLKFLLTSGPLLRHFDPEALTELHTDASGVGVGAVLVQFHGGSQHVIAYASRTLTKAERNYTVTELECLAVVFAVQKFRPYLYGRRFKIVTDHHSLCWLAGLRDPAGRLARWALRLQEYNFSVAYKSGRCHADADCLSRLPSHNVDTDDDDFDNYLATIYSDFPSLDAFGH-------EQQRDPSLRQIIDATRNSECAT------------PFAIQD--GLL-----YRKNYSSNGAPLLLVVPECLRLAVFRAMHDDITSGHFGFARTLHRIRQRFYWPRLWKTTKQYVASCDVCQRHKQPSTPPAGPLQPLRPP--TSPFEKVGIDLLGPFPKSVTGRRWIIVCVDYLTRYTETMAVASATSS-DVSWFLLHSIILRHGAPRVVISDRGRQFTADVVEELLRLCGCHYRHSSPYHPQTNGLTERTNRTITNMLSMYVSA-DHKNWDAVLPFVTYAFNTAKHEVTGYTPFFLLYARHP 1021 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig123.24.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig123.24.1 >prot_H-akashiwo_Contig123.24.1 ID=prot_H-akashiwo_Contig123.24.1|Name=mRNA_H-akashiwo_Contig123.24.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=709bp MVGKRDQSVCLCMDLRGLNKITETVKFPLPTPREMFDQLANSWWYSSMDCback to top mRNA from alignment at H-akashiwo_Contig123:1416811..1419230- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig123.24.1 ID=mRNA_H-akashiwo_Contig123.24.1|Name=mRNA_H-akashiwo_Contig123.24.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=2420bp|location=Sequence derived from alignment at H-akashiwo_Contig123:1416811..1419230- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig123:1416811..1419230- >mRNA_H-akashiwo_Contig123.24.1 ID=mRNA_H-akashiwo_Contig123.24.1|Name=mRNA_H-akashiwo_Contig123.24.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=2127bp|location=Sequence derived from alignment at H-akashiwo_Contig123:1416811..1419230- (Heterosigma akashiwo CCMP452)back to top |