mRNA_H-akashiwo_Contig1229.5.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1229.5.1 vs. uniprot
Match: A0A7S2UZV4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZV4_9STRA) HSP 1 Score: 208 bits (529), Expect = 3.800e-65 Identity = 97/161 (60.25%), Postives = 123/161 (76.40%), Query Frame = 1
Query: 37 ELKSDMGMDYVPLENMLMAADWEGADQFTRDALIKIAGPTAVKTGFVYFTQVKNIPTTDLHTIERLWKKHSDGKFGYSEQRKIWDKQGGDFDKFCEKIGWKIQDGDNLRLRKWFGKSEFIYDLNEAPKGHFPLTSALRGVTLLKELLTHPAWDDEEFAARK 519
+L S G+DY+PL MLM D+E ADQFTRD LI IAG A + GFVY+TQVK++P D+ T+ERLW K+S+GKFGY+ QRK++ G+F+ FC K+ W + D R R+WFGKSEFIYDL +AP+GH PLTSALRG TLLKEL+ +PAWD+EEF A+K
Sbjct: 66 DLPSSCGVDYIPLATMLMTGDFEAADQFTRDNLIFIAGEKAQERGFVYWTQVKDLPPVDMATMERLWLKYSNGKFGYTMQRKLYRLGKGNFEAFCRKVDWNVVDEGVERKRRWFGKSEFIYDLEKAPRGHLPLTSALRGTTLLKELMNYPAWDNEEFQAKK 226
BLAST of mRNA_H-akashiwo_Contig1229.5.1 vs. uniprot
Match: B8C9C4_THAPS (GUN4 domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9C4_THAPS) HSP 1 Score: 202 bits (513), Expect = 8.820e-64 Identity = 96/151 (63.58%), Postives = 112/151 (74.17%), Query Frame = 1
Query: 40 LKSDMGMDYVPLENMLMAADWEGADQFTRDALIKIAGPTAVKTGFVYFTQVKNIPTTDLHTIERLWKKHSDGKFGYSEQRKIWDKQGGDFDKFCEKIGWKIQDGDNLRLRKWFGKSEFIYDLNEAPKGHFPLTSALRGVTLLKELLTHPAW 492
L SD+GMDYVPL ML ADQFTRDALI +AG A FVYFT+VKNIP+TDL TIERLW K S GKFGYS Q++IW K GDF+ +C KIGW +DG+ R ++WFG SEF YD+ +APKGH PLTSALRG +L+KELL HP W
Sbjct: 1 LPSDVGMDYVPLATMLATGQLAEADQFTRDALIVLAGSKAKGRDFVYFTEVKNIPSTDLATIERLWTKFSGGKFGYSVQKQIWKKSKGDFEVWCNKIGWTTKDGEIERKKRWFGASEFTYDVKKAPKGHLPLTSALRGTSLIKELLNHPVW 151
BLAST of mRNA_H-akashiwo_Contig1229.5.1 vs. uniprot
Match: A0A1Z5KQ11_FISSO (GUN4 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQ11_FISSO) HSP 1 Score: 204 bits (518), Expect = 1.770e-63 Identity = 96/156 (61.54%), Postives = 115/156 (73.72%), Query Frame = 1
Query: 40 LKSDMGMDYVPLENMLMAADWEGADQFTRDALIKIAGPTAVKTGFVYFTQVKNIPTTDLHTIERLWKKHSDGKFGYSEQRKIWDKQGGDFDKFCEKIGWKIQDGDNLRLRKWFGKSEFIYDLNEAPKGHFPLTSALRGVTLLKELLTHPAWDDEEF 507
L S GMDYVPL ML D ADQFTRDALI+I+G A FVYFT VKNIP+TDL T+ERLW K S GKFGYS Q+K W++ GDF+ FC KIGW DG+ R ++WFG SEFIYD+ +AP+GH PLTSALRG +L+K LL HP WD+E++
Sbjct: 68 LPSACGMDYVPLATMLATGDLVAADQFTRDALIEISGAKAKGRNFVYFTDVKNIPSTDLATMERLWNKFSKGKFGYSVQKKKWNQSKGDFEVFCRKIGWTTTDGEVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTSLIKSLLKHPVWDNEDW 223
BLAST of mRNA_H-akashiwo_Contig1229.5.1 vs. uniprot
Match: A0A7S2UF66_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UF66_9STRA) HSP 1 Score: 204 bits (518), Expect = 2.070e-63 Identity = 95/156 (60.90%), Postives = 115/156 (73.72%), Query Frame = 1
Query: 40 LKSDMGMDYVPLENMLMAADWEGADQFTRDALIKIAGPTAVKTGFVYFTQVKNIPTTDLHTIERLWKKHSDGKFGYSEQRKIWDKQGGDFDKFCEKIGWKIQDGDNLRLRKWFGKSEFIYDLNEAPKGHFPLTSALRGVTLLKELLTHPAWDDEEF 507
L SD+GMDYVPL ML ADQFTRDALI IAG FVYFT+VKN+P TDL T+ERLW K S GKFGYS Q+K W + GDF+ FC KIGW +DGD R ++WFG SEFIYD+ +AP+GH PLTSALRG +LLK++L HP WD++++
Sbjct: 73 LPSDVGMDYVPLATMLATGQLAEADQFTRDALIVIAGSKEKGRDFVYFTEVKNMPATDLATMERLWNKFSKGKFGYSVQKKKWKQSKGDFEAFCSKIGWTTKDGDVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTSLLKQMLNHPVWDNDDW 228
BLAST of mRNA_H-akashiwo_Contig1229.5.1 vs. uniprot
Match: A0A4D9CXN1_9STRA (GUN4 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CXN1_9STRA) HSP 1 Score: 204 bits (518), Expect = 2.920e-63 Identity = 100/163 (61.35%), Postives = 121/163 (74.23%), Query Frame = 1
Query: 19 PTEKGIELKSDMGMDYVPLENMLMAADWEGADQFTRDALIKIAGPTAVKTGFVYFTQVKNIPTTDLHTIERLWKKHSDGKFGYSEQRKIWDKQ--GGDFDKFCEKIGWKIQDGDNLRLRKWFGKSEFIYDLNEAPKGHFPLTSALRGVTLLKELLTHPAWDDE 501
PT + LKS+ GMDYVPL NML+ D++GADQFTRDALI+IAG A K G+VYFT+VK +P D+ TIE+LW K+S GKFGY+ QR IW++ G DF++FC KIGW + R KWFGKSEFIYDL +AP GH PLTSALRG +LLK LLT+P W E
Sbjct: 73 PTMEKDVLKSECGMDYVPLANMLLIGDFKGADQFTRDALIQIAGENARKRGYVYFTEVKGLPEADMATIEKLWLKYSKGKFGYTVQRAIWNQVTVGKDFERFCRKIGWNTVENGIERKLKWFGKSEFIYDLEKAPVGHLPLTSALRGTSLLKNLLTYPLWATE 235
BLAST of mRNA_H-akashiwo_Contig1229.5.1 vs. uniprot
Match: A0A7S2R3S6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R3S6_9STRA) HSP 1 Score: 203 bits (516), Expect = 5.340e-63 Identity = 95/156 (60.90%), Postives = 116/156 (74.36%), Query Frame = 1
Query: 40 LKSDMGMDYVPLENMLMAADWEGADQFTRDALIKIAGPTAVKTGFVYFTQVKNIPTTDLHTIERLWKKHSDGKFGYSEQRKIWDKQGGDFDKFCEKIGWKIQDGDNLRLRKWFGKSEFIYDLNEAPKGHFPLTSALRGVTLLKELLTHPAWDDEEF 507
L SDMGMDYVPL ML ADQFTRDALIK+ G T FVY+T+VK IP+TDL TIERLW K S GKFGYS Q+K W + DF+ FC KIGW +DGD R ++WFG SEFIYD+ +AP+GH PLTSALRG +L+K+LLTHP W+++++
Sbjct: 81 LPSDMGMDYVPLATMLATGQLAEADQFTRDALIKLCGATEKGRNFVYWTEVKLIPSTDLATIERLWNKFSGGKFGYSVQKKKWRQSKNDFEVFCRKIGWTTKDGDVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTSLIKQLLTHPVWENDDW 236
BLAST of mRNA_H-akashiwo_Contig1229.5.1 vs. uniprot
Match: A0A6U3XS79_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3XS79_9STRA) HSP 1 Score: 202 bits (513), Expect = 1.220e-62 Identity = 94/156 (60.26%), Postives = 115/156 (73.72%), Query Frame = 1
Query: 40 LKSDMGMDYVPLENMLMAADWEGADQFTRDALIKIAGPTAVKTGFVYFTQVKNIPTTDLHTIERLWKKHSDGKFGYSEQRKIWDKQGGDFDKFCEKIGWKIQDGDNLRLRKWFGKSEFIYDLNEAPKGHFPLTSALRGVTLLKELLTHPAWDDEEF 507
L SD+GMDYVPL ML W ADQFTRDALI +AG FVY+T+VK IP+TDL TIERLW K S GKFGYS Q+K W + DF+ +C+KIGW DGD R ++WFG SEFIYDL +AP+GH PLTSALRG +L+KELL HP W+++++
Sbjct: 74 LPSDVGMDYVPLATMLATGQWAEADQFTRDALIVLAGSKEKGRTFVYWTEVKRIPSTDLATIERLWNKFSKGKFGYSVQKKKWRQSKNDFEAWCKKIGWTTTDGDVERKKRWFGASEFIYDLKKAPEGHLPLTSALRGTSLIKELLNHPVWENDDW 229
BLAST of mRNA_H-akashiwo_Contig1229.5.1 vs. uniprot
Match: A0A7S2MK00_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MK00_9STRA) HSP 1 Score: 201 bits (512), Expect = 1.740e-62 Identity = 94/156 (60.26%), Postives = 116/156 (74.36%), Query Frame = 1
Query: 40 LKSDMGMDYVPLENMLMAADWEGADQFTRDALIKIAGPTAVKTGFVYFTQVKNIPTTDLHTIERLWKKHSDGKFGYSEQRKIWDKQGGDFDKFCEKIGWKIQDGDNLRLRKWFGKSEFIYDLNEAPKGHFPLTSALRGVTLLKELLTHPAWDDEEF 507
L SD+GMDYVPL ML ADQFTRDALI +AG FVYFT+VKNIP+TDL TIERLW K S GKFGYS Q++ W + GDFD FC KIGW +DG+ R ++WFG SEFIYD+ +AP+GH PLTSALRG +L +ELL+HP W+++++
Sbjct: 72 LPSDVGMDYVPLATMLATGQLAEADQFTRDALIVLAGSKEKGRDFVYFTEVKNIPSTDLATIERLWNKFSGGKFGYSVQKRKWKQSKGDFDLFCRKIGWLTKDGEVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTSLCRELLSHPVWENDDW 227
BLAST of mRNA_H-akashiwo_Contig1229.5.1 vs. uniprot
Match: A0A6S8ZHG1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZHG1_9STRA) HSP 1 Score: 199 bits (507), Expect = 1.060e-61 Identity = 94/156 (60.26%), Postives = 116/156 (74.36%), Query Frame = 1
Query: 40 LKSDMGMDYVPLENMLMAADWEGADQFTRDALIKIAGPTAVKTGFVYFTQVKNIPTTDLHTIERLWKKHSDGKFGYSEQRKIWDKQGGDFDKFCEKIGWKIQDGDNLRLRKWFGKSEFIYDLNEAPKGHFPLTSALRGVTLLKELLTHPAWDDEEF 507
L SD+GMDYVPL ML ADQFTRDALI +AG A FVYFT+VKNIP+TDL TIERLW K S GKFGYS Q++ + + DF+ FC KIGW +DG+ R ++WFG SEFIYD+ +AP+GH PLTSALRG +L+KELL HP WD++++
Sbjct: 74 LPSDVGMDYVPLATMLATGQLAEADQFTRDALIVLAGSKAKGRDFVYFTEVKNIPSTDLATIERLWSKFSKGKFGYSVQKRKYRQAKNDFEAFCRKIGWTTKDGEVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTSLIKELLNHPVWDNDDW 229
BLAST of mRNA_H-akashiwo_Contig1229.5.1 vs. uniprot
Match: A0A836C7C7_9STRA (GUN4 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7C7_9STRA) HSP 1 Score: 199 bits (506), Expect = 1.100e-61 Identity = 93/154 (60.39%), Postives = 111/154 (72.08%), Query Frame = 1
Query: 40 LKSDMGMDYVPLENMLMAADWEGADQFTRDALIKIAGPTAVKTGFVYFTQVKNIPTTDLHTIERLWKKHSDGKFGYSEQRKIWDKQGGDFDKFCEKIGWKIQDGDNLRLRKWFGKSEFIYDLNEAPKGHFPLTSALRGVTLLKELLTHPAWDDE 501
L SD G+DYVPL ML D++GADQFTRDALI+ AG + K GFVY+T VKNIP DL TIE+LW K+S GKFGYS Q ++W ++ GDF+ FC IGW + + R +WFG +EFIYD APKGH PLTSALRG LLKELL HP W+ E
Sbjct: 68 LSSDAGIDYVPLATMLATGDFKGADQFTRDALIRAAGEGSQKRGFVYWTDVKNIPNKDLATIEKLWLKYSGGKFGYSVQAEVWKRKKGDFENFCRTIGWNTKSEEIERKLRWFGANEFIYDAERAPKGHLPLTSALRGTQLLKELLNHPVWETE 221 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1229.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1229.5.1 >prot_H-akashiwo_Contig1229.5.1 ID=prot_H-akashiwo_Contig1229.5.1|Name=mRNA_H-akashiwo_Contig1229.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=176bp MSTTEEPTEKGIELKSDMGMDYVPLENMLMAADWEGADQFTRDALIKIAGback to top mRNA from alignment at H-akashiwo_Contig1229:229044..229571- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1229.5.1 ID=mRNA_H-akashiwo_Contig1229.5.1|Name=mRNA_H-akashiwo_Contig1229.5.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=528bp|location=Sequence derived from alignment at H-akashiwo_Contig1229:229044..229571- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1229:229044..229571- >mRNA_H-akashiwo_Contig1229.5.1 ID=mRNA_H-akashiwo_Contig1229.5.1|Name=mRNA_H-akashiwo_Contig1229.5.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=528bp|location=Sequence derived from alignment at H-akashiwo_Contig1229:229044..229571- (Heterosigma akashiwo CCMP452)back to top |