mRNA_H-akashiwo_Contig1227.7.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1227.7.1 vs. uniprot
Match: A0A7S3HBQ7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBQ7_9STRA) HSP 1 Score: 160 bits (404), Expect = 1.320e-45 Identity = 93/218 (42.66%), Postives = 124/218 (56.88%), Query Frame = 1
Query: 34 GKLDQLLAQRTALEMEAQVISEELQSL------PCGIKGSLVDAEGFPLAGIDIYNVRTKRQRLACIQTDYKEVMSALESEVMRLHQEKAAELPPKPPGRTTERPENERRIFAAPCPANGWATLKPFALIDEVFSGSPACDAGIQVGDKLIKFGSADHTNNRGLMALVDVVSSSVGLPVELVIERSGEAGSSRRLEVTLTPHQWQGRGLVGCHFQPIQ 669
G L+ L AQR ALE EA I EL S P GIK VDAEG+P IDI NV+ KR+RLA I TDYK +M +E +++LH E LPP P T + AP LKP A +DE+F GSPA AGIQ+ D L++FG+ N L ++V++V +V P+ +V+ R+ E +E+++TP W GRGL+GCH P+Q
Sbjct: 16 GTLNNLSAQRDALEAEADAIHSELTSPGINGEPPAGIKTPFVDAEGYPRGDIDIINVKDKRRRLAEINTDYKALMKQIEQTMLQLHNE----LPPVPTSVPTASENTDSNTTVAP--------LKPMAKLDEIFPGSPAATAGIQLNDLLMQFGTVTSNTNNFLKSIVELVGKNVNQPIPMVVLRNSEC-----VELSITPQPWGGRGLLGCHLSPMQ 216
BLAST of mRNA_H-akashiwo_Contig1227.7.1 vs. uniprot
Match: A0A485L6J3_9STRA (Aste57867_16377 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L6J3_9STRA) HSP 1 Score: 152 bits (383), Expect = 2.130e-42 Identity = 88/215 (40.93%), Postives = 124/215 (57.67%), Query Frame = 1
Query: 58 QRTALEMEAQVISEELQS--LPCGIKGSLVDAEGFPLAGIDIYNVRTKRQRLACIQTDYKEVMSALESEVMRLHQEKAAELPPKPPGRTTERPENERRIFAAP--CPANG--------WATLKPFALIDEVFSGSPACDAGIQVGDKLIKFGSADHTNNRGLMALVDVVSSSVGLPVELVIERSGEAGSSRRLEVTLTPHQWQGRGLVGCHFQPI 666
+R A+E E Q+I EEL S P G+KG LVD+EGFP A ID+YNVR KR R AC+QTD K M +E + ++ EK A PP P + E+ + P P G AT PFA ++ V GSP+ +AG+ VGD +I FGSA N+R L A+ ++V ++ +++V+ R+ + +TL PHQW G+G++GCH PI
Sbjct: 10 ERAAIEAEMQLIGEELCSGPSPIGLKGPLVDSEGFPRADIDVYNVRHKRHRFACLQTDLKWKMKEIEDVMAEIYAEKKALQPPPAPRAAIPKAESPKSQSLEPVDAPVVGPVKLEGKLVATTAPFARVESVQDGSPSNEAGLLVGDLIIGFGSATAENHRELAAIREIVGRNINTAIDVVVARN-----EGQYRLTLVPHQWSGQGVLGCHIIPI 219
BLAST of mRNA_H-akashiwo_Contig1227.7.1 vs. uniprot
Match: A0A6H5LM37_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LM37_9PHAE) HSP 1 Score: 152 bits (385), Expect = 2.540e-42 Identity = 98/235 (41.70%), Postives = 129/235 (54.89%), Query Frame = 1
Query: 7 LPSSQTHGDGKLDQLLAQRTALEMEAQVISEELQS------LPCGIKGSLVDAEGFPLAGIDIYNVRTKRQRLACIQTDYKEVMSALESEVMRLHQEKAAELPPKPPGR--TTERPENERRIFAAPCPANGWATLKPFALIDEVFSGSPACDAGIQVGDKLIKFGSADHTNNRGLMALVDVVSSSVGLPVELVIER----SGEAGSSRR----LEVTLTPHQWQGRGLVGCHFQP 663
+PS + +L L AQR ALE+EA I+ EL+S P G+KG+LVDA+GFPLAG D++NVR KR R CIQTD+K VMS +E + LH + A P P T P I A +L P A +++V GSPA AG+ VGD +++FG D ++ +GL +VDVV G V + + R SGE GS E+TL P W GRGL+G H P
Sbjct: 16 IPSPEEALRKELVVLQAQRDALELEADAIASELKSPGANGEAPVGVKGALVDADGFPLAGFDLFNVREKRHRFNCIQTDHKAVMSRIEKSLHALHDARLARPTPLPTAFSVTAATPPASSLIGMDSAAAAADMSLAPIAKVNQVSEGSPASAAGLAVGDLVLRFGHVDISHPKGLGGVVDVVREKEGQEVPVTVLRTTSVSGEGGSVGTGGGVRELTLVPKTWSGRGLLGVHLLP 250
BLAST of mRNA_H-akashiwo_Contig1227.7.1 vs. uniprot
Match: A0A1V9YCS9_9STRA (26S proteasome non-ATPase regulatory subunit n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YCS9_9STRA) HSP 1 Score: 147 bits (370), Expect = 1.960e-40 Identity = 89/220 (40.45%), Postives = 125/220 (56.82%), Query Frame = 1
Query: 37 KLDQLLAQRTALEMEAQVISEELQS--LPCGIKGSLVDAEGFPLAGIDIYNVRTKRQRLACIQTDYKEVMSALESEVMRLHQEKAAELP-PKP----PGRTTERPENERRIFAAPCPANGWATLK--PFALIDEVFSGSPACDAGIQVGDKLIKFGSADHTNNRGLMALVDVVSSSVGLPVELVIERSGEAGSSRRLEVTLTPHQWQGRGLVGCHFQPIQ 669
+ +L QR +E E Q+I EEL S P G+KG LVDAEGFP ID+YNVR KR R AC+QTD K VM +E+ + ++ E ++P P P P T R + + L PFAL+D V G+ +AG++ D ++ FGSA+ TN+R L A+ D+V +V +P+E+VIER+ S R + LTPH W G G++GC P +
Sbjct: 3 RFKELDKQRGTIEAELQMIIEELTSGPNPAGLKGPLVDAEGFPRGDIDVYNVRHKRHRFACLQTDLKMVMQEIENVMAGIYAETKPQIPVPAPVFQRPASTAARSSDPGADVPLLVKVDDPIVLDMAPFALVDSVQPGTNIDEAGLEAYDSIVSFGSANATNHRELQAIRDIVMRNVNVPIEVVIERN----DSDRFRLQLTPHHWHGNGVLGCLLLPYK 218
BLAST of mRNA_H-akashiwo_Contig1227.7.1 vs. uniprot
Match: A0A6G0XMV9_9STRA (Nas2_N domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XMV9_9STRA) HSP 1 Score: 146 bits (368), Expect = 3.500e-40 Identity = 88/221 (39.82%), Postives = 129/221 (58.37%), Query Frame = 1
Query: 37 KLDQLLAQRTALEMEAQVISEELQS--LPCGIKGSLVDAEGFPLAGIDIYNVRTKRQRLACIQTDYKEVMSALESEVMRLHQEKAAE---LPPKP----PGRTTERPENERRIFAAPCPANGWATLK--PFALIDEVFSGSPACDAGIQVGDKLIKFGSADHTNNRGLMALVDVVSSSVGLPVELVIERSGEAGSSRRLEVTLTPHQWQGRGLVGCHFQPI 666
+ QL +R A+E E ++I EEL S P G+KG LVDAEGFP A ID+YNVR KR R AC+QTD K M +E + ++ EK A+ KP P P + F AP + + +K PFA ++ V GSP+ +AG+ VGD++I FGSA+ N+R L A+ ++V + +E+V +R + +L++ L PH W G+G++GCH P+
Sbjct: 3 RFKQLDKERAAIEAEIELIVEELNSGPNPIGLKGPLVDAEGFPRADIDVYNVRHKRHRFACLQTDLKWKMKEIEEVMAEIYGEKKAQQXXXXXKPAFTAPSSQVAEPTSN---FHAPVKLDKSSEIKSSPFAKVESVQDGSPSFEAGLLVGDQIITFGSANADNHRELSAIREIVMRHINATIEVVAQRGED-----QLQIFLVPHLWPGQGVLGCHIVPL 215
BLAST of mRNA_H-akashiwo_Contig1227.7.1 vs. uniprot
Match: A0A067D8X5_SAPPC (Nas2_N domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D8X5_SAPPC) HSP 1 Score: 142 bits (358), Expect = 1.170e-38 Identity = 85/220 (38.64%), Postives = 122/220 (55.45%), Query Frame = 1
Query: 37 KLDQLLAQRTALEMEAQVISEELQS--LPCGIKGSLVDAEGFPLAGIDIYNVRTKRQRLACIQTDYKEVMSALESEVMRLHQEK-------AAELPPKPPGRTTERPENERRIFAAPCPANGWATLKPFALIDEVFSGSPACDAGIQVGDKLIKFGSADHTNNRGLMALVDVVSSSVGLPVELVIERSGEAGSSRRLEVTLTPHQWQGRGLVGCHFQPIQ 669
+LDQ QR +E E +I EEL S P G+KG L+DAEGFP ID+Y VR KR R AC+QTD K VM +E + ++ A+ P +PP + E + P + PFA++D V SPA +AG++ D +I FGSA+ TN+R L A+ D+V ++ +P+E+V+ER+ R + LTPH W G G++GC P +
Sbjct: 6 ELDQ---QRATIEAEIALIVEELTSGPNPAGLKGPLIDAEGFPRGDIDVYTVRHKRHRFACLQTDLKFVMKDIEDVMAGIYSASKPTVPTPVAQTPVRPPAPIRAPEKEEPLLVKVDDPVV--LEMAPFAIVDSVQPDSPASEAGLEAYDSIIAFGSANATNHRDLAAVRDIVLRNMNMPIEVVVERN----DCDRFRLQLTPHHWLGNGVLGCLLVPYK 216
BLAST of mRNA_H-akashiwo_Contig1227.7.1 vs. uniprot
Match: W4G0I1_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G0I1_9STRA) HSP 1 Score: 141 bits (356), Expect = 2.760e-38 Identity = 82/229 (35.81%), Postives = 129/229 (56.33%), Query Frame = 1
Query: 37 KLDQLLAQRTALEMEAQVISEELQS--LPCGIKGSLVDAEGFPLAGIDIYNVRTKRQRLACIQTDYKEVMSALESEVMRLHQEKAAEL-------PPKPPGRTTERPENERRIFAAPCPANGWATLK----------PFALIDEVFSGSPACDAGIQVGDKLIKFGSADHTNNRGLMALVDVVSSSVGLPVELVIERSGEAGSSRRLEVTLTPHQWQGRGLVGCHFQPI 666
+ +L +R A++ E Q+I EEL + P G+KG LVD EGFP + ID+Y VR KR R AC+Q D K M +E + ++ EK A+ P P G P ++ AA ++ +K PFA ++ + GSP+ +AG+QVGD +++FG+A N+R L A+ ++V ++ P+E+V++R G A R ++L PH W G+G++GCH P+
Sbjct: 3 RFQELDKERAAIDAEIQLIVEELTAGPNPIGLKGPLVDDEGFPRSDIDVYTVRHKRHRFACLQNDLKWKMQEIEDVMTSIYAEKKAQXXXXXXKQPTIPAG-----PSAHSKLHAADVVSDSTVPVKLEGNAVVLSVPFARVESIQDGSPSSEAGLQVGDLVLEFGTATADNHRELAAIREIVMRNLDAPIEVVVQRRGTADQFR---LSLVPHSWIGQGVLGCHIVPL 223
BLAST of mRNA_H-akashiwo_Contig1227.7.1 vs. uniprot
Match: A0A0G4EYN7_VITBC (26S proteasome non-ATPase regulatory subunit 9 n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EYN7_VITBC) HSP 1 Score: 140 bits (352), Expect = 5.930e-38 Identity = 77/212 (36.32%), Postives = 124/212 (58.49%), Query Frame = 1
Query: 40 LDQLLAQRTALEMEAQVISEELQS--LPCGIKGSLVDAEGFPLAGIDIYNVRTKRQRLACIQTDYKEVMSALESEVMRLHQEKAAELPPKPPGRTTERPENERRIFAAPCPANGWATLKPFALIDEVFSGSPACDAGIQVGDKLIKFGSADHTNNRGLMALVDVVSSSVGLPVELVIERSGEAGSSRRLEVTLTPHQWQGRGLVGCHFQPIQ 669
L QL+ R A+E E + ++ L + +P G++G+L+DAEGFP A +DI +R R +LAC+QTD+ E+M +E+ + LH + A +P P ++ + R ANG FA++DEV +GSP+ AG+Q+ D+++ FG D + G ++ VV +VG V +V+ R +R + ++L P W GRGL+GCH QP++
Sbjct: 6 LQQLIKDRDAMESEMEALTAYLTAPGMP-GVRGNLLDAEGFPRADLDIVPIRQARHKLACLQTDHAELMKKIEAGLHDLHAQGAVRVPRGPGSSSSSSGPSSR--------ANGVGHRPAFAVVDEVSAGSPSEAAGLQINDRIVAFGDVDASTPDGFKSIARVVQENVGRNVNVVVRRE-----AREMALSLRPQTWSGRGLLGCHLQPMK 203
BLAST of mRNA_H-akashiwo_Contig1227.7.1 vs. uniprot
Match: A0A024T9B6_9STRA (PDZ domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T9B6_9STRA) HSP 1 Score: 140 bits (352), Expect = 1.130e-37 Identity = 79/225 (35.11%), Postives = 125/225 (55.56%), Query Frame = 1
Query: 37 KLDQLLAQRTALEMEAQVISEELQS--LPCGIKGSLVDAEGFPLAGIDIYNVRTKRQRLACIQTDYKEVMSALESEVMRLHQEKAAELPP--KPPGRTTERPENERRIFAAPCPANGWATLK-----------PFALIDEVFSGSPACDAGIQVGDKLIKFGSADHTNNRGLMALVDVVSSSVGLPVELVIERSGEAGSSRRLEVTLTPHQWQGRGLVGCHFQPI 666
+ +L +R A++ E Q+I+EEL S P G+KG LVD EGFP + ID+Y VR KR R AC+Q D K M +E + ++ E+ A+ PP K P T + + + A +K PFA ++ + GSP+ +AG+QVGD +++FG+A N+R L A+ D+V ++ +E++++R A ++L PH W G G++GCH P+
Sbjct: 3 RFQELDKERAAIDAEIQLIAEELTSGPNPIGLKGPLVDEEGFPRSDIDVYTVRHKRHRFACLQNDLKWKMKEIEDVMTSIYAEQKAQQPPTLKQPNSTAKGTLSHSTVHAIEANKGTALPVKLLGNSGVDSAIPFARVESIQDGSPSSEAGLQVGDLILQFGTAKAENHRELAAIRDIVGRNINTTIEVIVQRQPTADLYL---LSLVPHSWNGPGVLGCHIVPL 224
BLAST of mRNA_H-akashiwo_Contig1227.7.1 vs. uniprot
Match: UPI001C41F9CF (26S proteasome non-ATPase regulatory subunit 9 n=1 Tax=Solea senegalensis TaxID=28829 RepID=UPI001C41F9CF) HSP 1 Score: 137 bits (346), Expect = 6.060e-37 Identity = 78/208 (37.50%), Postives = 121/208 (58.17%), Query Frame = 1
Query: 49 LLAQRTALEMEAQVISEELQSLPCGIKGSLVDAEGFPLAGIDIYNVRTKRQRLACIQTDYKEVMSALESEVMRLHQEKAAELPPKPPGRTTERPENERRIFAAPCPANGWATLKP-FALIDEVFSGSPACDAGIQVGDKLIKFGSADHTNNRGLMALVDVVSSSVGLPVELVIERSGEAGSSRRLEVTLTPHQWQGRGLVGCHFQPIQ 669
L+ ++ +E + Q + L+ GI+G LVDAEGFP A I+IY +RT R ++C+Q D+K +M +E + +LH + A+ E+ E E + A TL P FA +D V GSPAC AG+++GD +I+FGS + N + L + VV S G P+ +++ R GE R++++LTP +W GRGL+GC+ PI+
Sbjct: 22 LVKKKDNIEEQIQAYYDVLEDQGVGIEGPLVDAEGFPRADINIYQIRTARHSISCLQNDHKAIMVEIEEALHKLHAREKAKR---------EQDEAEAGVEAM----EQQVTLPPPFARVDAVTQGSPACGAGLKIGDGVIEFGSVNTGNFQNLQNIAAVVQHSEGKPLRVLVVRDGE-----RVQMSLTPQRWSGRGLLGCNIVPIR 211 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1227.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1227.7.1 >prot_H-akashiwo_Contig1227.7.1 ID=prot_H-akashiwo_Contig1227.7.1|Name=mRNA_H-akashiwo_Contig1227.7.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=226bp MHLPSSQTHGDGKLDQLLAQRTALEMEAQVISEELQSLPCGIKGSLVDAEback to top mRNA from alignment at H-akashiwo_Contig1227:252327..253094- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1227.7.1 ID=mRNA_H-akashiwo_Contig1227.7.1|Name=mRNA_H-akashiwo_Contig1227.7.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=768bp|location=Sequence derived from alignment at H-akashiwo_Contig1227:252327..253094- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1227:252327..253094- >mRNA_H-akashiwo_Contig1227.7.1 ID=mRNA_H-akashiwo_Contig1227.7.1|Name=mRNA_H-akashiwo_Contig1227.7.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=678bp|location=Sequence derived from alignment at H-akashiwo_Contig1227:252327..253094- (Heterosigma akashiwo CCMP452)back to top |